Strain Fitness in Shewanella amazonensis SB2B around Sama_1250

Experiment: Paraquat dichloride 0.03125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.03125 mg/ml
1,532,689	-	dinG	Sama_1249	0.58	-0.3
1,532,689	-	dinG	Sama_1249	0.58	+0.2
1,532,689	-	dinG	Sama_1249	0.58	+1.1
1,532,837	-	dinG	Sama_1249	0.65	+0.2
1,532,862	+	dinG	Sama_1249	0.66	-1.7
1,532,863	-	dinG	Sama_1249	0.66	+0.3
1,532,863	-	dinG	Sama_1249	0.66	-1.5
1,532,863	-	dinG	Sama_1249	0.66	+0.3
1,532,863	-	dinG	Sama_1249	0.66	+2.1
1,532,863	-	dinG	Sama_1249	0.66	-0.5
1,532,863	-	dinG	Sama_1249	0.66	+0.1
1,532,864	+	dinG	Sama_1249	0.66	-0.7
1,532,864	+	dinG	Sama_1249	0.66	-2.5
1,532,864	+	dinG	Sama_1249	0.66	+0.8
1,532,864	+	dinG	Sama_1249	0.66	-0.7
1,532,864	+	dinG	Sama_1249	0.66	-1.6
1,532,865	-	dinG	Sama_1249	0.66	-1.7
1,532,865	-	dinG	Sama_1249	0.66	+0.9
1,532,865	-	dinG	Sama_1249	0.66	+1.9
1,532,877	+	dinG	Sama_1249	0.67	-0.2
1,532,878	-	dinG	Sama_1249	0.67	-1.7
1,532,878	-	dinG	Sama_1249	0.67	-1.1
1,532,913	+	dinG	Sama_1249	0.68	+1.2
1,532,913	+	dinG	Sama_1249	0.68	+0.3
1,532,915	+	dinG	Sama_1249	0.69	+0.8
1,532,915	+	dinG	Sama_1249	0.69	-0.8
1,532,915	+	dinG	Sama_1249	0.69	+1.5
1,532,915	+	dinG	Sama_1249	0.69	-0.2
1,532,915	+	dinG	Sama_1249	0.69	+0.0
1,532,931	-	dinG	Sama_1249	0.69	-0.7
1,533,038	+	dinG	Sama_1249	0.75	+0.3
1,533,039	-	dinG	Sama_1249	0.75	-0.1
1,533,057	+	dinG	Sama_1249	0.75	+0.0
1,533,057	+	dinG	Sama_1249	0.75	-0.1
1,533,058	-	dinG	Sama_1249	0.75	+0.2
1,533,058	-	dinG	Sama_1249	0.75	-0.0
1,533,114	+	dinG	Sama_1249	0.78	-2.1
1,533,115	-	dinG	Sama_1249	0.78	+0.5
1,533,115	-	dinG	Sama_1249	0.78	+1.0
1,533,164	+	dinG	Sama_1249	0.81	+0.6
1,533,205	+	dinG	Sama_1249	0.83	-1.2
1,533,205	+	dinG	Sama_1249	0.83	-0.1
1,533,205	+	dinG	Sama_1249	0.83	-1.2
1,533,205	+	dinG	Sama_1249	0.83	-0.7
1,533,205	+	dinG	Sama_1249	0.83	-0.1
1,533,205	+	dinG	Sama_1249	0.83	-1.5
1,533,206	-	dinG	Sama_1249	0.83	+0.4
1,533,206	-	dinG	Sama_1249	0.83	+0.1
1,533,206	-	dinG	Sama_1249	0.83	-0.8
1,533,206	-	dinG	Sama_1249	0.83	-0.1
1,533,206	-	dinG	Sama_1249	0.83	+1.1
1,533,206	-	dinG	Sama_1249	0.83	-1.1
1,533,206	-	dinG	Sama_1249	0.83	-0.6
1,533,206	-	dinG	Sama_1249	0.83	-1.8
1,533,206	-	dinG	Sama_1249	0.83	-1.5
1,533,206	-	dinG	Sama_1249	0.83	-1.8
1,533,270	+	dinG	Sama_1249	0.86	-2.4
1,533,270	+	dinG	Sama_1249	0.86	+0.1
1,533,363	+				+1.5
1,533,383	+				-0.3
1,533,384	-				-2.4
1,533,411	+				-1.2
1,533,411	+				+0.8
1,533,411	+				+0.8
1,533,412	-				-1.0
1,533,412	-				+1.0
1,533,412	-				+0.2
1,533,412	-				-0.7
1,533,412	-				+0.5
1,533,412	-				-0.7
1,533,434	-				+0.5
1,533,434	-				-0.1
1,533,434	-				-0.5
1,533,434	-				-0.6
1,533,470	+				-1.2
1,533,470	+				-0.7
1,533,470	+				-0.7
1,533,471	-				+1.9
1,533,471	-				+0.3
1,533,471	-				+0.2
1,533,471	-				-0.4
1,533,472	+				-0.5
1,533,472	+				+0.4
1,533,472	+				-0.2
1,533,473	-				-0.3
1,533,473	-				+1.9
1,533,473	-				-0.7
1,533,518	+				-0.4
1,533,519	-				+0.6
1,533,519	-				+0.5
1,533,519	-				+0.4
1,533,519	-				-0.1
1,533,519	-				+0.2
1,533,519	-				-1.3
1,533,524	+				+0.1
1,533,524	+				-1.7
1,533,524	+				+0.7
1,533,525	-				-0.0
1,533,526	+				+0.5
1,533,526	+				+1.1
1,533,527	-				-0.1
1,533,588	-				-0.6
1,533,588	-				+0.3
1,533,595	-				+0.1
1,533,595	-				+0.3
1,533,598	+				-0.5
1,533,599	-				+0.7
1,533,615	+				+1.2
1,533,615	+				-0.3
1,533,620	+				-0.2
1,533,621	-				+0.3
1,533,642	+				+0.0
1,533,642	+				+0.2
1,533,642	+				+1.9
1,533,642	+				-0.5
1,533,642	+				+0.5
1,533,642	+				-2.0
1,533,642	+				+0.8
1,533,642	+				-2.4
1,533,642	+				+1.3
1,533,642	+				-1.7
1,533,642	+				-1.5
1,533,642	+				+2.3
1,533,642	+				+0.5
1,533,642	+				-0.6
1,533,642	+				-0.3
1,533,642	+				+0.1
1,533,642	+				-0.2
1,533,642	+				-1.2
1,533,642	+				-0.8
1,533,643	-				+1.8
1,533,643	-				-1.5
1,533,643	-				-1.3
1,533,643	-				-0.1
1,533,643	-				-1.5
1,533,643	-				+0.0
1,533,643	-				-0.4
1,533,643	-				-0.0
1,533,643	-				-0.2
1,533,643	-				-2.4
1,533,643	-				+0.4
1,533,643	-				-1.6
1,533,643	-				+0.1
1,533,643	-				+0.8
1,533,643	-				+0.1
1,533,643	-				+1.9
1,533,643	-				-1.5
1,533,643	-				-0.3
1,533,643	-				+1.0
1,533,643	-				-1.2
1,533,643	-				-0.0
1,533,643	-				+0.2
1,533,643	-				-2.0
1,533,643	-				+0.0
1,533,643	-				-1.5
1,533,643	-				-0.7
1,533,656	-				+1.5
1,533,656	-				+0.3
1,533,663	+				+0.8
1,533,663	+				-0.6
1,533,664	-				-1.7
1,533,785	+				+0.0
1,533,786	-				-0.5
1,533,786	-				-1.2
1,533,786	-				-1.2
1,533,793	+				+2.1
1,533,793	+				-2.1
1,533,829	+				-1.0
1,533,830	-				-1.1
1,533,856	+				-0.1
1,533,856	+				+0.5
1,533,867	+				-2.2
1,533,867	+				+1.5
1,533,867	+				-1.1
1,533,867	+				-1.3
1,533,867	+				+0.0
1,533,867	+				+0.8
1,533,868	-				+1.7
1,533,959	+		Sama_1250	0.12	-1.0
1,533,959	+		Sama_1250	0.12	-1.8
1,533,959	+		Sama_1250	0.12	-1.0
1,533,960	-		Sama_1250	0.12	+0.3
1,533,967	+		Sama_1250	0.12	+0.1
1,533,968	-		Sama_1250	0.12	-0.2
1,533,976	+		Sama_1250	0.13	+0.6
1,533,976	+		Sama_1250	0.13	+0.0
1,534,025	+		Sama_1250	0.15	-0.0
1,534,025	+		Sama_1250	0.15	-1.5
1,534,025	+		Sama_1250	0.15	-1.1
1,534,025	+		Sama_1250	0.15	-0.7
1,534,201	+		Sama_1250	0.22	+0.3
1,534,201	+		Sama_1250	0.22	-1.3
1,534,202	-		Sama_1250	0.22	+1.1
1,534,202	-		Sama_1250	0.22	-0.9
1,534,202	-		Sama_1250	0.22	+0.1
1,534,217	+		Sama_1250	0.23	+0.3
1,534,217	+		Sama_1250	0.23	-1.3
1,534,217	+		Sama_1250	0.23	-0.8
1,534,217	+		Sama_1250	0.23	-0.3
1,534,218	-		Sama_1250	0.23	+0.9
1,534,230	+		Sama_1250	0.23	+0.8
1,534,230	+		Sama_1250	0.23	+1.0
1,534,230	+		Sama_1250	0.23	+0.8
1,534,230	+		Sama_1250	0.23	+2.5
1,534,231	-		Sama_1250	0.23	+0.3
1,534,231	-		Sama_1250	0.23	-0.2
1,534,231	-		Sama_1250	0.23	+0.0
1,534,231	-		Sama_1250	0.23	+1.0
1,534,232	+		Sama_1250	0.23	-1.2
1,534,232	+		Sama_1250	0.23	-1.3
1,534,232	+		Sama_1250	0.23	+0.5
1,534,233	-		Sama_1250	0.23	-0.2
1,534,261	-		Sama_1250	0.25	-0.5
1,534,261	-		Sama_1250	0.25	-2.7
1,534,261	-		Sama_1250	0.25	-0.9
1,534,312	+		Sama_1250	0.27	+0.9
1,534,312	+		Sama_1250	0.27	-2.2
1,534,312	+		Sama_1250	0.27	-0.9
1,534,312	+		Sama_1250	0.27	-0.8
1,534,312	+		Sama_1250	0.27	-0.2
1,534,313	-		Sama_1250	0.27	-0.0
1,534,313	-		Sama_1250	0.27	+0.5
1,534,313	-		Sama_1250	0.27	-0.1
1,534,375	+		Sama_1250	0.29	-1.8
1,534,462	+		Sama_1250	0.33	-1.4
1,534,462	+		Sama_1250	0.33	+0.8
1,534,462	+		Sama_1250	0.33	+0.5
1,534,463	-		Sama_1250	0.33	+0.9
1,534,463	-		Sama_1250	0.33	+0.9
1,534,509	+		Sama_1250	0.35	-1.4
1,534,554	+		Sama_1250	0.37	+0.4
1,534,567	+		Sama_1250	0.37	+1.1
1,534,567	+		Sama_1250	0.37	-1.4
1,534,568	-		Sama_1250	0.37	-2.0
1,534,654	+		Sama_1250	0.41	-0.7
1,534,660	+		Sama_1250	0.41	+0.3
1,534,660	+		Sama_1250	0.41	+0.2
1,534,660	+		Sama_1250	0.41	+0.2
1,534,661	-		Sama_1250	0.41	-1.7
1,534,724	+		Sama_1250	0.44	-0.7
1,534,727	+		Sama_1250	0.44	+1.0
1,534,727	+		Sama_1250	0.44	+0.1
1,534,727	+		Sama_1250	0.44	-1.9
1,534,727	+		Sama_1250	0.44	+0.5
1,534,728	-		Sama_1250	0.44	-0.8
1,534,728	-		Sama_1250	0.44	+0.6
1,534,728	-		Sama_1250	0.44	-0.2
1,534,828	+		Sama_1250	0.48	+0.3
1,534,828	+		Sama_1250	0.48	-0.5
1,534,843	+		Sama_1250	0.49	-0.1
1,534,856	-		Sama_1250	0.49	-0.7
1,534,856	-		Sama_1250	0.49	+0.3
1,534,856	-		Sama_1250	0.49	-1.8
1,534,865	+		Sama_1250	0.50	-0.6
1,534,865	+		Sama_1250	0.50	-0.7
1,534,866	-		Sama_1250	0.50	-0.5
1,534,943	+		Sama_1250	0.53	-0.2
1,534,968	+		Sama_1250	0.54	-0.2
1,534,969	-		Sama_1250	0.54	-0.5
1,534,969	-		Sama_1250	0.54	+0.9
1,534,970	+		Sama_1250	0.54	+0.3
1,534,970	+		Sama_1250	0.54	+0.5
1,534,970	+		Sama_1250	0.54	+0.3
1,534,981	-		Sama_1250	0.55	+1.0
1,535,006	+		Sama_1250	0.56	+1.5
1,535,006	+		Sama_1250	0.56	+0.1
1,535,007	-		Sama_1250	0.56	-0.1
1,535,007	-		Sama_1250	0.56	-0.4
1,535,032	-		Sama_1250	0.57	-0.6
1,535,061	+		Sama_1250	0.58	-0.1
1,535,062	-		Sama_1250	0.58	-1.1
1,535,062	-		Sama_1250	0.58	+0.5
1,535,062	-		Sama_1250	0.58	+0.8
1,535,062	-		Sama_1250	0.58	-0.2
1,535,231	+		Sama_1250	0.65	-0.3
1,535,231	+		Sama_1250	0.65	+0.7
1,535,259	+		Sama_1250	0.66	+0.2
1,535,259	+		Sama_1250	0.66	-2.1
1,535,259	+		Sama_1250	0.66	+0.3
1,535,259	+		Sama_1250	0.66	+0.8
1,535,260	-		Sama_1250	0.66	-1.0
1,535,334	+		Sama_1250	0.69	+0.7
1,535,334	+		Sama_1250	0.69	-0.9
1,535,335	-		Sama_1250	0.69	-2.7
1,535,360	+		Sama_1250	0.70	-0.6
1,535,361	-		Sama_1250	0.70	-0.9
1,535,361	-		Sama_1250	0.70	-2.2
1,535,378	-		Sama_1250	0.71	+0.5
1,535,579	+		Sama_1250	0.79	-0.1
1,535,579	+		Sama_1250	0.79	-0.5
1,535,579	+		Sama_1250	0.79	+0.8
1,535,580	-		Sama_1250	0.79	+1.6
1,535,591	+		Sama_1250	0.80	+0.5
1,535,678	+		Sama_1250	0.84	-3.1
1,535,678	+		Sama_1250	0.84	+1.3
1,535,679	-		Sama_1250	0.84	-1.8
1,535,723	+		Sama_1250	0.85	+0.2
1,535,724	-		Sama_1250	0.85	+1.3
1,535,724	-		Sama_1250	0.85	+0.0
1,535,736	+		Sama_1250	0.86	+0.8
1,535,737	-		Sama_1250	0.86	+1.0
1,535,803	+		Sama_1250	0.89	-1.8
1,535,803	+		Sama_1250	0.89	-1.6
1,535,804	-		Sama_1250	0.89	-1.0
1,535,807	-		Sama_1250	0.89	-0.2
1,535,807	-		Sama_1250	0.89	+0.6
1,535,814	-		Sama_1250	0.89	-2.0
1,535,903	-				+1.0
1,535,903	-				+1.6
1,535,910	-				+1.8
1,535,910	-				+0.7
1,535,967	-				-0.2
1,535,972	+				-0.8
1,535,972	+				+0.5
1,535,973	-				+1.1
1,535,973	-				+0.3
1,535,975	+				+0.2
1,535,975	+				-1.2
1,535,976	-				+0.4
1,535,976	-				-0.1
1,535,976	-				+0.0
1,535,976	-				+0.8
1,535,976	-				-0.2
1,535,976	-				+0.1
1,535,978	+				-0.8
1,535,978	+				-2.0
1,535,978	+				-0.8
1,535,979	-				+1.3
1,536,071	+				-0.2
1,536,071	+				-1.7
1,536,072	-				+1.1
1,536,072	-				+0.2
1,536,072	-				+0.3
1,536,072	-				+1.3
1,536,072	-				+0.5
1,536,132	+				-0.2
1,536,137	-				+1.3
1,536,278	+				+1.8
1,536,279	-				+3.2
1,536,321	-				+0.2
1,536,321	-				+0.9
1,536,559	+		Sama_1251	0.22	-1.2
1,536,559	+		Sama_1251	0.22	+1.1
1,536,559	+		Sama_1251	0.22	+0.8
1,536,561	+		Sama_1251	0.22	+0.8
1,536,598	+		Sama_1251	0.25	-0.2
1,536,613	+		Sama_1251	0.27	+0.9
1,536,657	+		Sama_1251	0.30	-0.1
1,536,676	+		Sama_1251	0.32	+1.0
1,536,676	+		Sama_1251	0.32	+0.9
1,536,676	+		Sama_1251	0.32	+1.0
1,536,676	+		Sama_1251	0.32	+0.8
1,536,688	+		Sama_1251	0.33	+1.3
1,536,700	+		Sama_1251	0.34	+0.4
1,536,700	+		Sama_1251	0.34	+1.0
1,536,700	+		Sama_1251	0.34	+0.2
1,536,738	+		Sama_1251	0.37	+0.9
1,536,742	+		Sama_1251	0.37	+0.8
1,536,742	+		Sama_1251	0.37	+0.3
1,536,742	+		Sama_1251	0.37	-0.2
1,536,743	-		Sama_1251	0.37	+3.8
1,536,786	+		Sama_1251	0.41	+0.4
1,536,786	+		Sama_1251	0.41	+0.8
1,536,799	+		Sama_1251	0.42	+1.2
1,536,804	+		Sama_1251	0.42	+1.8
1,536,805	-		Sama_1251	0.42	+0.0
1,536,826	+		Sama_1251	0.44	+0.6
1,536,826	+		Sama_1251	0.44	+0.9
1,536,826	+		Sama_1251	0.44	+0.9
1,536,946	+		Sama_1251	0.54	+1.1
1,536,946	+		Sama_1251	0.54	+1.0
1,536,948	+		Sama_1251	0.54	+0.8
1,536,948	+		Sama_1251	0.54	+0.8
1,536,948	+		Sama_1251	0.54	+2.6
1,536,948	+		Sama_1251	0.54	-0.7
1,536,948	+		Sama_1251	0.54	+0.1
1,536,948	+		Sama_1251	0.54	+0.8
1,536,952	+		Sama_1251	0.55	+2.5
1,536,952	+		Sama_1251	0.55	+1.1
1,536,952	+		Sama_1251	0.55	+1.1
1,536,952	+		Sama_1251	0.55	-0.6
1,536,972	+		Sama_1251	0.56	+0.7
1,536,972	+		Sama_1251	0.56	-1.0
1,537,039	+		Sama_1251	0.62	-0.2
1,537,039	+		Sama_1251	0.62	+0.3
1,537,039	+		Sama_1251	0.62	+0.3
1,537,040	-		Sama_1251	0.62	+0.8
1,537,044	+		Sama_1251	0.62	-0.1