Strain Fitness in Shewanella amazonensis SB2B around Sama_1233

Experiment: Paraquat dichloride 0.03125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.03125 mg/ml
1,516,363	+				-1.2
1,516,399	-				-1.5
1,516,401	+				-1.2
1,516,402	-				-0.7
1,516,402	-				-0.5
1,516,673	-		Sama_1232	0.33	-2.1
1,517,027	+		Sama_1232	0.68	-1.0
1,517,027	+		Sama_1232	0.68	+0.3
1,517,028	-		Sama_1232	0.68	-1.0
1,517,069	+		Sama_1232	0.72	-0.7
1,517,351	-				+0.0
1,517,383	+				+0.3
1,517,384	-				+0.3
1,517,384	-				-0.7
1,517,464	-		Sama_1233	0.12	-0.7
1,517,489	-		Sama_1233	0.15	+0.2
1,517,551	+		Sama_1233	0.22	-1.0
1,517,810	-		Sama_1233	0.51	-1.0
1,517,983	+		Sama_1233	0.71	-1.0
1,518,055	+		Sama_1233	0.79	-1.0
1,518,244	-				+0.3
1,518,244	-				-0.7
1,518,282	-				+0.0
1,518,354	+		Sama_1234	0.12	-0.2
1,518,367	-		Sama_1234	0.13	-1.2
1,518,556	-		Sama_1234	0.32	-1.2
1,518,596	-		Sama_1234	0.35	-0.7
1,519,065	+		Sama_1234	0.81	-0.7
1,519,156	-		Sama_1234	0.90	-0.7
1,519,156	-		Sama_1234	0.90	-1.0
1,519,212	-				+0.0