Strain Fitness in Shewanella amazonensis SB2B around Sama_1231

Experiment: Paraquat dichloride 0.03125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.03125 mg/ml
1,515,550	-				-1.8
1,515,626	+				-0.2
1,515,626	+				-2.4
1,515,626	+				+0.8
1,515,626	+				+1.7
1,515,753	-		Sama_1231	0.22	-0.5
1,515,753	-		Sama_1231	0.22	-3.1
1,515,781	+		Sama_1231	0.26	-1.7
1,516,045	-		Sama_1231	0.60	-1.1
1,516,084	+		Sama_1231	0.65	-1.0
1,516,085	-		Sama_1231	0.65	-1.1
1,516,200	+		Sama_1231	0.79	-0.7
1,516,201	-		Sama_1231	0.79	-2.2
1,516,225	+		Sama_1231	0.82	-0.2
1,516,225	+		Sama_1231	0.82	-0.7
1,516,226	-		Sama_1231	0.83	-1.2
1,516,226	-		Sama_1231	0.83	-1.5
1,516,286	+				-1.7
1,516,287	-				-1.8
1,516,363	+				-1.2
1,516,399	-				-1.5
1,516,401	+				-1.2
1,516,402	-				-0.7
1,516,402	-				-0.5
1,516,673	-		Sama_1232	0.33	-2.1
1,517,027	+		Sama_1232	0.68	-1.0
1,517,027	+		Sama_1232	0.68	+0.3
1,517,028	-		Sama_1232	0.68	-1.0
1,517,069	+		Sama_1232	0.72	-0.7
1,517,351	-				+0.0