Strain Fitness in Shewanella amazonensis SB2B around Sama_1184

Experiment: Paraquat dichloride 0.03125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.03125 mg/ml
1,446,424	-				-1.0
1,446,424	-				-0.2
1,446,471	+				+1.3
1,446,471	+				-1.5
1,446,472	-				-0.5
1,446,477	+				-0.5
1,446,535	-				-0.7
1,446,537	+				+0.5
1,446,626	-		Sama_1183	0.17	-0.3
1,446,662	-		Sama_1183	0.21	-2.6
1,446,686	+		Sama_1183	0.24	-0.1
1,446,686	+		Sama_1183	0.24	-0.2
1,446,686	+		Sama_1183	0.24	-0.7
1,446,686	+		Sama_1183	0.24	-0.2
1,446,686	+		Sama_1183	0.24	-0.9
1,446,687	-		Sama_1183	0.24	-0.2
1,446,687	-		Sama_1183	0.24	+0.6
1,446,730	+		Sama_1183	0.28	-2.1
1,446,731	-		Sama_1183	0.28	-1.2
1,446,731	-		Sama_1183	0.28	-2.9
1,446,750	-		Sama_1183	0.30	+0.3
1,446,853	+		Sama_1183	0.41	-0.9
1,446,936	+		Sama_1183	0.50	+0.0
1,446,936	+		Sama_1183	0.50	+0.8
1,447,033	-		Sama_1183	0.61	+0.7
1,447,033	-		Sama_1183	0.61	-0.7
1,447,090	-		Sama_1183	0.67	-0.7
1,447,090	-		Sama_1183	0.67	-0.7
1,447,116	+		Sama_1183	0.70	+0.3
1,447,253	+		Sama_1183	0.84	-1.0
1,447,253	+		Sama_1183	0.84	-1.0
1,447,309	+				-3.5
1,447,309	+				-1.6
1,447,309	+				+0.8
1,447,309	+				-2.4
1,447,582	+		Sama_1184	0.11	+1.1
1,447,582	+		Sama_1184	0.11	-1.5
1,447,583	-		Sama_1184	0.11	-1.5
1,447,583	-		Sama_1184	0.11	+1.3
1,447,613	+		Sama_1184	0.13	-1.7
1,447,752	-		Sama_1184	0.21	-1.0
1,447,859	+		Sama_1184	0.27	-0.7
1,448,034	+		Sama_1184	0.38	+1.3
1,448,035	-		Sama_1184	0.38	-2.1
1,448,126	+		Sama_1184	0.43	-1.0
1,448,127	-		Sama_1184	0.43	-0.2
1,448,188	-		Sama_1184	0.47	+0.3
1,448,285	+		Sama_1184	0.53	-1.6
1,448,286	-		Sama_1184	0.53	+0.3
1,448,338	+		Sama_1184	0.56	-0.5
1,448,339	-		Sama_1184	0.56	-1.0
1,448,370	+		Sama_1184	0.58	-2.0
1,448,468	+		Sama_1184	0.63	-2.1
1,448,543	+		Sama_1184	0.68	-1.8
1,448,557	-		Sama_1184	0.69	+0.1
1,448,572	+		Sama_1184	0.69	-1.6
1,448,604	+		Sama_1184	0.71	-2.0
1,448,605	-		Sama_1184	0.71	+0.2
1,448,607	+		Sama_1184	0.72	-2.0
1,448,607	+		Sama_1184	0.72	-1.0
1,448,686	-		Sama_1184	0.76	-2.1
1,448,772	+		Sama_1184	0.81	-0.6
1,448,872	+		Sama_1184	0.87	+1.1
1,448,872	+		Sama_1184	0.87	-1.7
1,448,873	-		Sama_1184	0.87	-1.2
1,449,139	+				-1.9
1,449,139	+				+0.4
1,449,301	+		Sama_1185	0.20	-2.0
1,449,301	+		Sama_1185	0.20	-0.2
1,449,301	+		Sama_1185	0.20	-0.2
1,449,311	-		Sama_1185	0.21	-0.1
1,449,395	+		Sama_1185	0.29	-1.2
1,449,395	+		Sama_1185	0.29	-0.6
1,449,395	+		Sama_1185	0.29	-0.2
1,449,396	-		Sama_1185	0.29	+0.4
1,449,411	+		Sama_1185	0.31	-1.7
1,449,470	+		Sama_1185	0.36	+1.9
1,449,470	+		Sama_1185	0.36	-1.2
1,449,471	-		Sama_1185	0.36	-1.7
1,449,478	+		Sama_1185	0.37	-3.0
1,449,536	+		Sama_1185	0.43	+0.6
1,449,560	+		Sama_1185	0.45	+0.0
1,449,560	+		Sama_1185	0.45	+2.8
1,449,560	+		Sama_1185	0.45	-1.5
1,449,646	+		Sama_1185	0.53	-1.5
1,449,646	+		Sama_1185	0.53	-0.0
1,449,646	+		Sama_1185	0.53	-0.6
1,449,646	+		Sama_1185	0.53	-0.0
1,449,646	+		Sama_1185	0.53	+0.4
1,449,745	+		Sama_1185	0.62	-0.7
1,449,753	-		Sama_1185	0.63	-1.1
1,449,753	-		Sama_1185	0.63	-2.5
1,449,941	+		Sama_1185	0.81	-2.0
1,449,941	+		Sama_1185	0.81	-2.6
1,449,942	-		Sama_1185	0.81	-0.1
1,449,971	+		Sama_1185	0.84	-0.6
1,449,971	+		Sama_1185	0.84	-1.5
1,449,971	+		Sama_1185	0.84	-1.5
1,449,972	-		Sama_1185	0.84	-0.2
1,449,972	-		Sama_1185	0.84	+2.4
1,449,973	+		Sama_1185	0.84	-0.2
1,450,046	+				-1.5
1,450,046	+				+1.4
1,450,074	+				+1.0