Strain Fitness in Shewanella amazonensis SB2B around Sama_1114

Experiment: Paraquat dichloride 0.03125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.03125 mg/ml
1,356,337	-		Sama_1113	0.87	-1.3
1,356,464	+		Sama_1113	0.89	-1.4
1,356,464	+		Sama_1113	0.89	-0.1
1,356,465	-		Sama_1113	0.89	-1.2
1,356,465	-		Sama_1113	0.89	-0.2
1,356,489	-		Sama_1113	0.90	+0.3
1,356,526	+				-0.5
1,356,650	-				-0.5
1,356,686	+				+0.1
1,356,687	-				-0.6
1,356,687	-				+0.4
1,356,688	+				-1.8
1,356,689	-				-1.4
1,356,721	-				-1.8
1,356,960	-				-1.9
1,356,960	-				+0.1
1,357,146	+				-1.8
1,357,147	-				+0.1
1,357,215	+				-2.9
1,357,215	+				+3.0
1,357,229	+				-0.7
1,357,576	+		Sama_1114	0.20	-1.4
1,357,577	-		Sama_1114	0.20	-0.1
1,357,631	+		Sama_1114	0.23	+0.7
1,357,631	+		Sama_1114	0.23	-0.0
1,357,631	+		Sama_1114	0.23	+0.2
1,357,683	-		Sama_1114	0.26	-2.1
1,357,683	-		Sama_1114	0.26	-0.9
1,357,683	-		Sama_1114	0.26	-0.4
1,357,770	+		Sama_1114	0.30	-2.2
1,357,770	+		Sama_1114	0.30	+1.1
1,357,792	-		Sama_1114	0.31	+1.4
1,357,792	-		Sama_1114	0.31	-1.3
1,357,794	+		Sama_1114	0.31	-0.2
1,357,794	+		Sama_1114	0.31	+0.8
1,357,854	-		Sama_1114	0.34	-1.7
1,358,038	+		Sama_1114	0.43	-1.4
1,358,038	+		Sama_1114	0.43	+0.2
1,358,098	+		Sama_1114	0.46	+0.4
1,358,099	-		Sama_1114	0.46	-0.3
1,358,353	-		Sama_1114	0.58	-0.8
1,358,528	+		Sama_1114	0.67	-0.9
1,358,529	-		Sama_1114	0.67	-2.3
1,358,557	-		Sama_1114	0.68	-1.1
1,358,557	-		Sama_1114	0.68	-0.6
1,358,557	-		Sama_1114	0.68	-1.4
1,358,565	-		Sama_1114	0.68	-1.4
1,358,580	-		Sama_1114	0.69	-1.6
1,358,657	+		Sama_1114	0.73	-1.4
1,358,716	-		Sama_1114	0.76	-0.0
1,358,716	-		Sama_1114	0.76	-1.6
1,358,748	+		Sama_1114	0.77	-0.1
1,358,748	+		Sama_1114	0.77	-2.7
1,359,148	-				-1.4
1,359,218	+				+1.6
1,359,218	+				-1.6
1,359,218	+				-1.8
1,359,218	+				-0.0
1,359,219	-				-1.2
1,359,219	-				-1.2
1,359,219	-				+3.0
1,359,219	-				+0.2
1,359,219	-				-0.7
1,359,219	-				-1.1
1,359,219	-				+0.2
1,359,319	-				+0.5
1,359,319	-				-0.7
1,359,319	-				-1.5
1,359,397	+				-1.7
1,359,453	+				-0.8
1,359,454	-				+0.8
1,359,636	+				-0.2
1,359,657	-				-1.8
1,359,859	-				-1.9
1,359,991	-		Sama_1115	0.10	-1.6
1,360,158	+		Sama_1115	0.12	-1.4
1,360,158	+		Sama_1115	0.12	+0.7
1,360,159	-		Sama_1115	0.12	+0.5
1,360,159	-		Sama_1115	0.12	-2.0