Strain Fitness in Shewanella amazonensis SB2B around Sama_1112

Experiment: Paraquat dichloride 0.03125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.03125 mg/ml
1,348,709	+				-0.6
1,348,748	-				+0.8
1,348,805	+				+1.8
1,348,806	-				+1.9
1,348,846	+				+0.4
1,348,856	+				-0.9
1,348,955	+				-1.0
1,348,977	+				-1.5
1,348,978	-				-1.6
1,348,981	+				+0.0
1,348,989	+				+0.8
1,348,989	+				+1.0
1,349,006	+				+0.7
1,349,006	+				-0.9
1,349,017	+				-0.8
1,349,017	+				+0.2
1,349,056	+				-1.6
1,349,057	-				-1.8
1,349,057	-				-0.3
1,349,067	+				-1.6
1,349,097	+				-0.2
1,349,097	+				-2.3
1,349,122	+				+0.3
1,349,122	+				-0.2
1,349,187	+				+1.4
1,349,187	+				-0.9
1,349,233	+				-0.5
1,349,238	+				-1.6
1,349,238	+				+0.0
1,349,238	+				-1.0
1,349,260	-				-1.2
1,349,260	-				+0.5
1,349,312	+				-0.4
1,349,389	-				+0.2
1,349,515	+				+1.7
1,349,515	+				-0.0
1,349,516	-				-0.7
1,349,516	-				-0.2
1,349,607	+				-2.7
1,349,608	-				+1.2
1,349,635	-				-0.5
1,349,664	+				+0.1
1,349,664	+				-0.1
1,349,674	+				+0.7
1,349,675	-				-1.9
1,349,675	-				+0.2
1,349,675	-				-0.9
1,349,675	-				+1.2
1,349,681	+				+0.2
1,349,764	+				-0.6
1,349,768	+				+0.3
1,349,769	-				-0.1
1,349,834	+				-0.6
1,349,834	+				-1.1
1,349,835	-				-0.9
1,349,835	-				-0.9
1,349,949	-		Sama_1112	0.17	+0.8
1,350,024	+		Sama_1112	0.21	+0.1
1,350,025	-		Sama_1112	0.21	-3.7
1,350,137	+		Sama_1112	0.28	+0.1
1,350,138	-		Sama_1112	0.28	+1.1
1,350,188	-		Sama_1112	0.31	-1.9
1,350,191	-		Sama_1112	0.32	+0.7
1,350,348	+		Sama_1112	0.41	+1.0
1,350,352	-		Sama_1112	0.42	+0.1
1,350,576	+		Sama_1112	0.56	+0.4
1,350,628	-		Sama_1112	0.59	-2.2
1,350,628	-		Sama_1112	0.59	-0.9
1,350,679	-		Sama_1112	0.62	-1.8
1,350,687	+		Sama_1112	0.62	-0.7
1,350,733	+		Sama_1112	0.65	+0.8
1,350,734	-		Sama_1112	0.65	+1.3
1,350,734	-		Sama_1112	0.65	-0.6
1,350,770	-		Sama_1112	0.68	-0.2
1,350,791	-		Sama_1112	0.69	-2.2
1,350,794	+		Sama_1112	0.69	+1.4
1,350,795	-		Sama_1112	0.69	-1.9
1,350,958	-		Sama_1112	0.79	-0.5
1,351,014	-		Sama_1112	0.83	+1.4
1,351,014	-		Sama_1112	0.83	+0.8
1,351,014	-		Sama_1112	0.83	-1.4
1,351,014	-		Sama_1112	0.83	-2.6
1,351,014	-		Sama_1112	0.83	-0.6
1,351,016	+		Sama_1112	0.83	-1.2
1,351,017	-		Sama_1112	0.83	+0.9
1,351,022	+		Sama_1112	0.83	+0.1
1,351,190	+				-1.2
1,351,190	+				+0.3
1,351,191	-				+2.4
1,351,191	-				-1.5
1,351,191	-				-0.2
1,351,191	-				-0.9
1,351,191	-				-1.6
1,351,201	-				-2.3
1,351,201	-				-0.2
1,351,201	-				+0.7
1,351,243	+				-0.4
1,351,262	-				-2.2
1,351,306	-				-0.1
1,351,306	-				-1.9
1,351,306	-				+1.4
1,351,418	+				+1.0
1,351,418	+				+0.4
1,351,418	+				-1.2
1,351,420	+				-0.9
1,351,420	+				+0.5
1,351,420	+				-0.8
1,351,420	+				-2.3
1,351,420	+				-1.6
1,351,521	+				-0.5
1,351,521	+				-0.7
1,351,521	+				+0.9
1,351,567	+				-0.8
1,351,568	-				-0.1
1,351,568	-				-0.3
1,351,568	-				-0.3
1,351,568	-				-2.2
1,351,568	-				+0.7
1,351,568	-				+0.0
1,351,578	+				+0.2
1,351,579	-				-1.2
1,351,739	+				-0.9
1,351,746	-				-0.9
1,351,746	-				-0.9
1,351,746	-				+0.1
1,351,746	-				-0.4
1,351,746	-				-0.2
1,351,746	-				-1.2
1,351,777	+				-0.3
1,351,778	-				-1.9
1,351,778	-				-0.6
1,351,779	+				-0.7
1,351,780	-				+2.7
1,351,880	+				-0.9
1,351,880	+				+0.1
1,351,979	+		Sama_1113	0.11	-2.0
1,351,980	-		Sama_1113	0.11	-0.6
1,351,980	-		Sama_1113	0.11	-0.8
1,352,003	+		Sama_1113	0.11	-1.8
1,352,003	+		Sama_1113	0.11	-0.9
1,352,003	+		Sama_1113	0.11	-0.3
1,352,003	+		Sama_1113	0.11	+0.1
1,352,004	-		Sama_1113	0.11	-0.6
1,352,004	-		Sama_1113	0.11	-1.0
1,352,004	-		Sama_1113	0.11	+0.4
1,352,004	-		Sama_1113	0.11	-0.0
1,352,004	-		Sama_1113	0.11	-0.6
1,352,004	-		Sama_1113	0.11	-0.8
1,352,004	-		Sama_1113	0.11	-0.7
1,352,004	-		Sama_1113	0.11	+1.0
1,352,052	+		Sama_1113	0.12	-1.1
1,352,052	+		Sama_1113	0.12	+0.2
1,352,053	-		Sama_1113	0.12	-0.9
1,352,127	+		Sama_1113	0.13	-2.4
1,352,201	+		Sama_1113	0.14	-0.8
1,352,201	+		Sama_1113	0.14	-0.0
1,352,201	+		Sama_1113	0.14	-1.4
1,352,201	+		Sama_1113	0.14	-0.6
1,352,202	-		Sama_1113	0.14	-0.2
1,352,202	-		Sama_1113	0.14	+0.5
1,352,202	-		Sama_1113	0.14	+0.4
1,352,202	-		Sama_1113	0.14	+0.4
1,352,211	+		Sama_1113	0.15	+0.8
1,352,211	+		Sama_1113	0.15	-2.5
1,352,212	-		Sama_1113	0.15	-1.9
1,352,212	-		Sama_1113	0.15	+1.4