Strain Fitness in Shewanella amazonensis SB2B around Sama_1022

Experiment: Paraquat dichloride 0.03125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.03125 mg/ml
1,236,112	+		Sama_1022	0.28	-2.0
1,236,145	+		Sama_1022	0.34	-0.6
1,236,184	+		Sama_1022	0.42	-1.7
1,236,240	-		Sama_1022	0.53	-1.7
1,236,265	-		Sama_1022	0.58	-1.9
1,236,336	+		Sama_1022	0.73	-1.4
1,236,454	+				+1.8
1,236,454	+				+0.5
1,236,469	+				-3.6
1,236,469	+				-1.0
1,236,469	+				+0.6
1,236,469	+				+0.1
1,236,473	+				+0.1
1,236,473	+				+0.6
1,236,474	-				+0.4
1,236,474	-				+0.5
1,236,474	-				-0.9
1,236,531	+				+0.4
1,236,531	+				-1.1
1,236,531	+				-1.9
1,236,532	-				-1.9
1,236,532	-				+0.2
1,236,532	-				-0.0
1,236,546	+				+0.8
1,236,548	+				-1.4
1,236,548	+				-0.4
1,236,548	+				-0.1
1,236,581	+				+0.1
1,236,581	+				-1.3
1,236,581	+				-1.5
1,236,597	+				-1.0
1,236,597	+				+1.4
1,236,597	+				+1.0
1,236,598	-				-0.4
1,236,598	-				-0.2
1,236,598	-				-0.2
1,236,598	-				-2.0
1,236,631	+				+0.4
1,236,631	+				-0.9
1,236,631	+				-0.6
1,236,640	+				-1.1
1,236,640	+				-1.1
1,236,640	+				+0.2
1,236,640	+				+0.5
1,236,640	+				-0.2
1,236,640	+				-1.0
1,236,640	+				+0.1
1,236,641	-				+0.1
1,236,652	+				+0.0
1,236,652	+				-2.2
1,236,653	-				-1.0
1,236,653	-				-0.9
1,236,682	-				-1.3
1,236,732	+				-1.2
1,236,732	+				+1.9
1,236,808	+		Sama_1023	0.11	-2.5
1,236,808	+		Sama_1023	0.11	+0.2
1,236,809	-		Sama_1023	0.11	-1.9
1,236,809	-		Sama_1023	0.11	-0.2
1,236,809	-		Sama_1023	0.11	+0.8
1,236,809	-		Sama_1023	0.11	-0.2
1,236,835	+		Sama_1023	0.13	+0.4
1,236,836	-		Sama_1023	0.13	+0.4
1,236,836	-		Sama_1023	0.13	+0.5
1,236,846	+		Sama_1023	0.13	-0.2
1,236,885	+		Sama_1023	0.16	-1.6
1,236,898	+		Sama_1023	0.17	+0.8
1,236,899	-		Sama_1023	0.17	+0.6
1,236,899	-		Sama_1023	0.17	+1.7
1,236,899	-		Sama_1023	0.17	+0.9
1,236,899	-		Sama_1023	0.17	+0.4
1,236,967	-		Sama_1023	0.21	-0.1
1,236,978	+		Sama_1023	0.22	-0.7
1,236,991	-		Sama_1023	0.23	-1.0
1,236,998	+		Sama_1023	0.23	-1.1
1,236,999	-		Sama_1023	0.23	-1.6
1,236,999	-		Sama_1023	0.23	-1.2
1,237,050	+		Sama_1023	0.26	+0.5
1,237,050	+		Sama_1023	0.26	-0.4
1,237,050	+		Sama_1023	0.26	+0.5
1,237,050	+		Sama_1023	0.26	+0.2
1,237,051	-		Sama_1023	0.26	-1.2
1,237,051	-		Sama_1023	0.26	+0.7
1,237,070	-		Sama_1023	0.28	+0.6
1,237,116	+		Sama_1023	0.30	+0.7
1,237,187	+		Sama_1023	0.35	+1.0
1,237,187	+		Sama_1023	0.35	-1.2
1,237,187	-		Sama_1023	0.35	+1.2
1,237,187	+		Sama_1023	0.35	+0.4
1,237,187	+		Sama_1023	0.35	-0.9
1,237,187	+		Sama_1023	0.35	-0.2
1,237,187	+		Sama_1023	0.35	-0.2
1,237,188	-		Sama_1023	0.35	-0.2
1,237,188	-		Sama_1023	0.35	-0.6
1,237,188	-		Sama_1023	0.35	-2.0
1,237,188	-		Sama_1023	0.35	-0.4
1,237,188	-		Sama_1023	0.35	+1.1
1,237,188	-		Sama_1023	0.35	-0.6
1,237,188	-		Sama_1023	0.35	-1.3
1,237,188	-		Sama_1023	0.35	-0.2
1,237,188	-		Sama_1023	0.35	-0.9
1,237,188	-		Sama_1023	0.35	-2.3
1,237,188	-		Sama_1023	0.35	+0.5
1,237,188	-		Sama_1023	0.35	-2.2
1,237,189	+		Sama_1023	0.35	-0.6
1,237,189	+		Sama_1023	0.35	+0.1
1,237,190	-		Sama_1023	0.35	+1.5
1,237,190	-		Sama_1023	0.35	-3.2
1,237,190	-		Sama_1023	0.35	+0.2
1,237,196	+		Sama_1023	0.35	-0.5
1,237,196	+		Sama_1023	0.35	-0.9
1,237,197	-		Sama_1023	0.36	+1.4
1,237,236	+		Sama_1023	0.38	+0.2
1,237,254	+		Sama_1023	0.39	-1.6
1,237,292	-		Sama_1023	0.42	+0.4
1,237,330	+		Sama_1023	0.44	-1.2
1,237,330	+		Sama_1023	0.44	-0.3
1,237,331	-		Sama_1023	0.44	-1.3
1,237,331	-		Sama_1023	0.44	-0.0
1,237,355	+		Sama_1023	0.45	-2.0
1,237,355	+		Sama_1023	0.45	+1.4
1,237,355	+		Sama_1023	0.45	+0.8
1,237,355	+		Sama_1023	0.45	-0.1
1,237,356	-		Sama_1023	0.46	+1.4
1,237,357	+		Sama_1023	0.46	-1.7
1,237,358	-		Sama_1023	0.46	+0.5
1,237,377	+		Sama_1023	0.47	+0.4
1,237,377	+		Sama_1023	0.47	-0.7
1,237,377	+		Sama_1023	0.47	+1.7
1,237,377	+		Sama_1023	0.47	-0.2
1,237,378	-		Sama_1023	0.47	+0.4
1,237,378	-		Sama_1023	0.47	-1.1
1,237,378	-		Sama_1023	0.47	+1.0
1,237,465	-		Sama_1023	0.52	-0.7
1,237,470	+		Sama_1023	0.53	+1.4
1,237,471	-		Sama_1023	0.53	-0.2
1,237,471	-		Sama_1023	0.53	-1.0
1,237,471	-		Sama_1023	0.53	+1.2