Strain Fitness in Shewanella amazonensis SB2B around Sama_0967

Experiment: Paraquat dichloride 0.03125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.03125 mg/ml
1,169,943	+				-0.4
1,169,943	+				+0.0
1,169,944	-				-0.1
1,169,944	-				+0.3
1,169,956	+				-1.5
1,169,960	+				+2.0
1,169,960	+				+1.5
1,169,960	+				-0.7
1,169,961	-				-0.1
1,170,017	+				+0.7
1,170,018	-				-2.1
1,170,018	-				+1.9
1,170,018	-				-0.9
1,170,019	+				-0.7
1,170,022	+				-0.9
1,170,023	-				-1.9
1,170,023	-				+0.5
1,170,026	+				+0.9
1,170,026	+				-0.5
1,170,026	+				+0.6
1,170,026	+				+1.0
1,170,048	-				-2.6
1,170,052	+				+1.5
1,170,063	-				-1.5
1,170,063	-				-3.4
1,170,063	-				-0.8
1,170,087	+				-0.1
1,170,097	-				-0.1
1,170,126	+				-2.4
1,170,127	-				-0.5
1,170,127	-				+0.7
1,170,169	+				-2.6
1,170,169	+				-0.7
1,170,169	+				-0.6
1,170,169	+				-0.7
1,170,169	+				-0.3
1,170,169	+				-4.0
1,170,170	-				-2.5
1,170,170	-				+0.5
1,170,170	-				-2.0
1,170,170	-				-2.5
1,170,170	-				-3.7
1,170,170	-				-1.1
1,170,170	-				+0.0
1,170,170	-				+0.2
1,170,238	-		Sama_0967	0.13	-0.8
1,170,260	+		Sama_0967	0.16	-1.7
1,170,260	+		Sama_0967	0.16	+0.5
1,170,427	+		Sama_0967	0.34	+0.7
1,170,428	-		Sama_0967	0.34	-1.7
1,170,431	-		Sama_0967	0.34	-0.9
1,170,461	+		Sama_0967	0.38	-0.9
1,170,461	+		Sama_0967	0.38	-2.1
1,170,461	+		Sama_0967	0.38	-2.2
1,170,461	+		Sama_0967	0.38	-0.4
1,170,461	+		Sama_0967	0.38	-1.5
1,170,462	-		Sama_0967	0.38	-2.5
1,170,462	-		Sama_0967	0.38	-1.4
1,170,462	-		Sama_0967	0.38	-2.2
1,170,462	-		Sama_0967	0.38	-1.1
1,170,462	-		Sama_0967	0.38	-0.9
1,170,462	-		Sama_0967	0.38	-3.6
1,170,465	-		Sama_0967	0.38	-0.4
1,170,494	+		Sama_0967	0.41	-2.0
1,170,494	+		Sama_0967	0.41	-0.4
1,170,533	+		Sama_0967	0.46	-0.4
1,170,533	+		Sama_0967	0.46	-0.4
1,170,533	+		Sama_0967	0.46	-0.9
1,170,533	+		Sama_0967	0.46	+1.8
1,170,534	-		Sama_0967	0.46	-0.4
1,170,534	-		Sama_0967	0.46	-1.5
1,170,534	-		Sama_0967	0.46	-2.2
1,170,539	+		Sama_0967	0.46	-0.4
1,170,539	+		Sama_0967	0.46	-1.5
1,170,539	+		Sama_0967	0.46	-0.8
1,170,539	+		Sama_0967	0.46	-1.1
1,170,539	+		Sama_0967	0.46	-0.5
1,170,540	-		Sama_0967	0.46	-2.0
1,170,540	-		Sama_0967	0.46	-0.9
1,170,540	-		Sama_0967	0.46	-1.4
1,170,540	-		Sama_0967	0.46	-2.0
1,170,540	-		Sama_0967	0.46	-2.5
1,170,546	-		Sama_0967	0.47	+2.2
1,170,569	+		Sama_0967	0.50	-1.5
1,170,569	+		Sama_0967	0.50	-1.1
1,170,569	+		Sama_0967	0.50	-2.3
1,170,570	-		Sama_0967	0.50	-1.4
1,170,570	-		Sama_0967	0.50	-2.1
1,170,570	-		Sama_0967	0.50	-0.7
1,170,570	-		Sama_0967	0.50	-0.6
1,170,570	-		Sama_0967	0.50	-1.3
1,170,570	-		Sama_0967	0.50	-1.1
1,170,570	-		Sama_0967	0.50	-0.6
1,170,572	+		Sama_0967	0.50	-0.6
1,170,572	+		Sama_0967	0.50	-0.5
1,170,572	+		Sama_0967	0.50	-0.9
1,170,572	+		Sama_0967	0.50	-0.1
1,170,572	+		Sama_0967	0.50	-0.0
1,170,573	-		Sama_0967	0.50	+0.6
1,170,604	+		Sama_0967	0.54	-0.1
1,170,618	+		Sama_0967	0.55	-1.1
1,170,618	+		Sama_0967	0.55	-0.5
1,170,619	-		Sama_0967	0.55	-1.7
1,170,656	+		Sama_0967	0.59	-0.9
1,170,657	-		Sama_0967	0.59	-0.3
1,170,660	-		Sama_0967	0.60	-1.1
1,170,664	-		Sama_0967	0.60	-0.7
1,170,671	-		Sama_0967	0.61	-0.8
1,170,726	+		Sama_0967	0.67	-0.9
1,170,761	+		Sama_0967	0.71	-2.1
1,170,854	+		Sama_0967	0.81	-2.0
1,170,854	+		Sama_0967	0.81	-1.1
1,170,860	+		Sama_0967	0.82	-0.5
1,170,860	+		Sama_0967	0.82	+0.5
1,170,860	+		Sama_0967	0.82	-0.7
1,170,860	+		Sama_0967	0.82	-0.8
1,170,860	+		Sama_0967	0.82	-2.1
1,170,860	+		Sama_0967	0.82	-0.8
1,170,861	-		Sama_0967	0.82	-0.1
1,170,861	-		Sama_0967	0.82	-0.4
1,170,861	-		Sama_0967	0.82	-0.3
1,170,861	-		Sama_0967	0.82	-2.4
1,170,861	-		Sama_0967	0.82	-1.1
1,170,861	-		Sama_0967	0.82	+0.5
1,170,861	-		Sama_0967	0.82	-1.5
1,170,861	-		Sama_0967	0.82	-2.6
1,170,911	+		Sama_0967	0.87	-0.9
1,170,911	+		Sama_0967	0.87	-1.5
1,170,911	+		Sama_0967	0.87	-2.2
1,170,941	+				-1.0
1,170,941	+				-0.7
1,170,941	+				-0.6
1,170,962	+				-2.5
1,170,962	+				-1.5
1,170,962	+				-0.5
1,170,962	+				-0.9
1,170,962	+				-0.3
1,170,962	+				-1.4
1,170,962	+				-1.7
1,170,962	+				-1.0
1,170,962	+				+1.1
1,170,962	+				-1.5
1,170,963	-				-0.9
1,170,963	-				-1.9
1,170,985	+				-2.6
1,171,022	+				-0.2
1,171,023	-				-0.8
1,171,038	-				-0.8
1,171,052	+				+0.5
1,171,062	+				-0.5
1,171,062	+				-1.2
1,171,074	+				+0.5
1,171,074	+				+0.8
1,171,111	+				-1.1
1,171,112	-				-0.7
1,171,126	+				-0.8
1,171,126	+				-0.3
1,171,126	+				-0.7
1,171,126	+				-1.3
1,171,127	-				-1.5
1,171,139	+				+0.8
1,171,139	+				-0.9
1,171,139	+				-0.3
1,171,139	+				-0.7
1,171,139	+				-0.2
1,171,139	+				+0.6
1,171,140	-				-0.7
1,171,140	-				+0.3
1,171,140	-				-0.5
1,171,140	-				+0.3
1,171,140	-				-0.5
1,171,140	-				+0.0
1,171,140	-				+0.9
1,171,140	-				+0.8
1,171,181	+				+0.1
1,171,181	+				-0.4
1,171,182	-				+1.0
1,171,225	+				-1.7
1,171,225	+				+0.5
1,171,225	+				+1.3
1,171,226	-				-0.4
1,171,226	-				+0.3
1,171,226	-				+0.3
1,171,259	+				+0.5
1,171,264	+				-1.0
1,171,264	+				-1.4
1,171,264	+				-1.5
1,171,328	+	prfC	Sama_0968	0.12	-1.1
1,171,362	+	prfC	Sama_0968	0.15	-0.3
1,171,363	-	prfC	Sama_0968	0.15	-1.0
1,171,363	-	prfC	Sama_0968	0.15	-0.0
1,171,363	-	prfC	Sama_0968	0.15	+0.0
1,171,421	+	prfC	Sama_0968	0.18	-0.7
1,171,421	+	prfC	Sama_0968	0.18	-1.4
1,171,422	-	prfC	Sama_0968	0.18	+0.6
1,171,425	+	prfC	Sama_0968	0.19	+0.0
1,171,425	+	prfC	Sama_0968	0.19	-1.0
1,171,425	+	prfC	Sama_0968	0.19	+2.5
1,171,426	-	prfC	Sama_0968	0.19	+1.0
1,171,444	+	prfC	Sama_0968	0.20	-0.4
1,171,445	-	prfC	Sama_0968	0.20	+0.3
1,171,445	-	prfC	Sama_0968	0.20	+0.3
1,171,529	+	prfC	Sama_0968	0.25	+0.0
1,171,530	-	prfC	Sama_0968	0.25	-0.1
1,171,530	-	prfC	Sama_0968	0.25	-1.3
1,171,547	+	prfC	Sama_0968	0.26	-0.5
1,171,548	-	prfC	Sama_0968	0.26	-1.0
1,171,548	-	prfC	Sama_0968	0.26	+0.6
1,171,569	-	prfC	Sama_0968	0.28	+1.5
1,171,613	+	prfC	Sama_0968	0.30	-1.2
1,171,613	+	prfC	Sama_0968	0.30	-1.1
1,171,613	+	prfC	Sama_0968	0.30	-2.5
1,171,613	+	prfC	Sama_0968	0.30	-0.5
1,171,613	+	prfC	Sama_0968	0.30	-0.3
1,171,613	+	prfC	Sama_0968	0.30	-1.5
1,171,613	+	prfC	Sama_0968	0.30	-0.5
1,171,613	+	prfC	Sama_0968	0.30	+0.5
1,171,613	+	prfC	Sama_0968	0.30	+1.3
1,171,614	-	prfC	Sama_0968	0.30	+0.1
1,171,614	-	prfC	Sama_0968	0.30	-0.1
1,171,614	-	prfC	Sama_0968	0.30	-0.7
1,171,614	-	prfC	Sama_0968	0.30	-0.7
1,171,614	-	prfC	Sama_0968	0.30	+0.4
1,171,614	-	prfC	Sama_0968	0.30	-0.4
1,171,644	-	prfC	Sama_0968	0.32	+0.8
1,171,644	-	prfC	Sama_0968	0.32	-1.1
1,171,675	-	prfC	Sama_0968	0.34	+0.9
1,171,705	-	prfC	Sama_0968	0.36	-1.9
1,171,724	+	prfC	Sama_0968	0.37	-0.2
1,171,747	+	prfC	Sama_0968	0.39	-0.7
1,171,747	+	prfC	Sama_0968	0.39	-0.1
1,171,748	-	prfC	Sama_0968	0.39	-0.7
1,171,928	+	prfC	Sama_0968	0.50	+1.8
1,171,928	+	prfC	Sama_0968	0.50	-2.4
1,171,928	+	prfC	Sama_0968	0.50	-0.0
1,171,928	+	prfC	Sama_0968	0.50	-0.5
1,171,928	+	prfC	Sama_0968	0.50	-1.9
1,171,928	+	prfC	Sama_0968	0.50	-0.9
1,171,928	+	prfC	Sama_0968	0.50	+1.3
1,171,928	+	prfC	Sama_0968	0.50	+0.2
1,171,929	-	prfC	Sama_0968	0.50	+0.5