Strain Fitness in Shewanella amazonensis SB2B around Sama_0863

Experiment: Paraquat dichloride 0.03125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.03125 mg/ml
1,052,746	+		Sama_0862	0.56	-1.1
1,052,772	+		Sama_0862	0.60	+0.4
1,052,772	+		Sama_0862	0.60	+1.2
1,052,772	+		Sama_0862	0.60	-0.0
1,052,772	+		Sama_0862	0.60	-1.0
1,052,772	+		Sama_0862	0.60	+1.0
1,052,772	+		Sama_0862	0.60	+0.5
1,052,772	+		Sama_0862	0.60	-1.5
1,052,772	+		Sama_0862	0.60	+3.1
1,052,772	+		Sama_0862	0.60	-0.5
1,052,772	+		Sama_0862	0.60	-0.4
1,052,772	+		Sama_0862	0.60	-0.1
1,052,772	+		Sama_0862	0.60	+0.4
1,052,772	+		Sama_0862	0.60	-0.4
1,052,772	+		Sama_0862	0.60	-0.6
1,052,772	+		Sama_0862	0.60	+0.5
1,052,772	+		Sama_0862	0.60	+0.5
1,052,772	+		Sama_0862	0.60	-0.3
1,052,772	+		Sama_0862	0.60	-0.2
1,052,772	+		Sama_0862	0.60	-2.2
1,052,772	+		Sama_0862	0.60	-2.6
1,052,772	+		Sama_0862	0.60	-0.5
1,052,772	+		Sama_0862	0.60	-0.5
1,052,772	+		Sama_0862	0.60	-0.1
1,052,772	+		Sama_0862	0.60	-1.1
1,052,773	-		Sama_0862	0.60	+1.3
1,052,773	-		Sama_0862	0.60	-1.1
1,052,773	-		Sama_0862	0.60	+0.3
1,052,773	-		Sama_0862	0.60	-0.1
1,052,773	-		Sama_0862	0.60	-1.3
1,052,773	-		Sama_0862	0.60	-1.8
1,052,773	-		Sama_0862	0.60	+1.3
1,052,773	-		Sama_0862	0.60	+0.1
1,052,773	-		Sama_0862	0.60	-0.3
1,052,773	-		Sama_0862	0.60	+1.5
1,052,773	-		Sama_0862	0.60	-0.5
1,052,773	-		Sama_0862	0.60	-1.3
1,052,773	-		Sama_0862	0.60	-2.4
1,052,773	-		Sama_0862	0.60	+0.1
1,052,773	-		Sama_0862	0.60	-0.1
1,052,773	-		Sama_0862	0.60	-0.1
1,052,773	-		Sama_0862	0.60	+1.0
1,052,773	-		Sama_0862	0.60	+0.8
1,052,773	-		Sama_0862	0.60	+0.4
1,052,773	-		Sama_0862	0.60	-1.0
1,052,889	-		Sama_0862	0.77	+0.4
1,052,889	-		Sama_0862	0.77	-2.7
1,052,889	-		Sama_0862	0.77	-0.4
1,052,901	-		Sama_0862	0.79	-2.0
1,053,124	-				+0.5
1,053,129	+				+2.5
1,053,133	+				-0.6
1,053,134	-				-1.2
1,053,175	-				-1.8
1,053,189	+				+2.0
1,053,189	+				+0.1
1,053,208	+				+0.3
1,053,360	-				+0.9
1,053,360	-				+0.3
1,053,360	-				+0.2
1,053,372	+				-1.5
1,053,372	+				+0.3
1,053,563	+				+0.4
1,053,571	+				-1.8
1,053,607	+				-1.1
1,053,607	+				+0.6
1,053,622	+				+0.6
1,053,707	+				-1.2
1,053,707	+				+0.2
1,053,708	-				-1.3
1,053,717	+				-0.5
1,053,717	+				-1.4
1,053,721	+				+0.3
1,054,252	+				-0.2
1,054,286	+				+0.5
1,054,287	-				-1.3
1,054,287	-				+0.5
1,054,303	-				-0.2
1,054,315	-				-0.9
1,054,414	+				-0.7
1,054,414	+				-0.1
1,054,414	+				-0.1
1,054,414	+				+0.4
1,054,414	+				-0.5
1,054,414	+				-0.3
1,054,414	+				+2.0
1,054,414	+				-2.4
1,054,414	+				+1.0
1,054,414	+				-1.5
1,054,415	-				-0.7
1,054,415	-				+1.1
1,054,415	-				-0.1
1,054,415	-				+1.5
1,054,415	-				+0.1
1,054,415	-				-1.1
1,054,415	-				-1.2
1,054,415	-				+1.3
1,054,415	-				+0.4
1,054,415	-				-0.9
1,054,416	+				-0.2
1,054,542	+		Sama_0864	0.11	-0.4
1,054,543	-		Sama_0864	0.11	-0.8
1,054,650	-		Sama_0864	0.16	+2.8
1,054,660	-		Sama_0864	0.16	-1.1
1,054,660	-		Sama_0864	0.16	+0.9
1,054,660	-		Sama_0864	0.16	+0.3
1,054,692	+		Sama_0864	0.18	-0.6
1,055,030	+		Sama_0864	0.33	-0.3
1,055,059	+		Sama_0864	0.34	-0.3
1,055,060	-		Sama_0864	0.34	+1.5
1,055,060	-		Sama_0864	0.34	-1.4
1,055,155	+		Sama_0864	0.39	-0.3
1,055,155	+		Sama_0864	0.39	-0.1
1,055,155	+		Sama_0864	0.39	-0.6
1,055,155	+		Sama_0864	0.39	+1.9
1,055,156	-		Sama_0864	0.39	-1.3
1,055,156	-		Sama_0864	0.39	-1.1
1,055,201	+		Sama_0864	0.41	-0.1
1,055,201	+		Sama_0864	0.41	+0.4
1,055,202	-		Sama_0864	0.41	-1.5
1,055,202	-		Sama_0864	0.41	+0.4
1,055,247	+		Sama_0864	0.43	+0.2