Strain Fitness in Shewanella amazonensis SB2B around Sama_0847

Experiment: Paraquat dichloride 0.03125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.03125 mg/ml
1,031,521	+		Sama_0846	0.70	-1.0
1,031,522	-		Sama_0846	0.70	-1.5
1,031,528	+		Sama_0846	0.71	+0.4
1,031,528	+		Sama_0846	0.71	+0.5
1,031,528	+		Sama_0846	0.71	+1.0
1,031,529	-		Sama_0846	0.71	+0.2
1,031,543	+		Sama_0846	0.71	-0.9
1,031,543	+		Sama_0846	0.71	-1.9
1,031,544	-		Sama_0846	0.71	+0.8
1,031,602	+		Sama_0846	0.74	-0.2
1,031,602	+		Sama_0846	0.74	+1.8
1,031,603	-		Sama_0846	0.74	+1.2
1,031,740	-		Sama_0846	0.79	-0.5
1,031,768	+		Sama_0846	0.80	-0.5
1,031,768	+		Sama_0846	0.80	+0.5
1,031,768	+		Sama_0846	0.80	+1.4
1,031,768	+		Sama_0846	0.80	+2.3
1,031,768	+		Sama_0846	0.80	-0.8
1,031,768	+		Sama_0846	0.80	-0.4
1,031,769	-		Sama_0846	0.80	-0.4
1,031,769	-		Sama_0846	0.80	-0.8
1,031,769	-		Sama_0846	0.80	-0.5
1,031,769	-		Sama_0846	0.80	-2.6
1,031,813	+		Sama_0846	0.82	-0.4
1,031,813	+		Sama_0846	0.82	-1.3
1,031,814	-		Sama_0846	0.82	+1.6
1,031,814	-		Sama_0846	0.82	+1.0
1,031,814	-		Sama_0846	0.82	-1.9
1,031,840	+		Sama_0846	0.83	-1.5
1,031,840	+		Sama_0846	0.83	-0.6
1,031,841	-		Sama_0846	0.83	-2.9
1,031,841	-		Sama_0846	0.83	-0.7
1,031,841	-		Sama_0846	0.83	+1.9
1,031,894	+		Sama_0846	0.85	-0.0
1,031,895	-		Sama_0846	0.85	+0.5
1,031,961	+		Sama_0846	0.88	+0.3
1,031,972	+		Sama_0846	0.88	+0.0
1,032,078	-				-2.5
1,032,158	+				-1.3
1,032,159	-				-1.1
1,032,159	-				+1.1
1,032,166	-				-0.3
1,032,233	+				-1.2
1,032,233	+				-0.2
1,032,233	+				+0.0
1,032,233	+				-0.8
1,032,234	-				-0.6
1,032,234	-				-0.1
1,032,234	-				-0.0
1,032,236	+				-0.4
1,032,236	+				+0.2
1,032,236	+				-1.5
1,032,237	-				+1.1
1,032,237	-				-0.6
1,032,237	-				+0.9
1,032,344	+				-0.3
1,032,383	+				+0.4
1,032,383	+				-0.2
1,032,448	+				-0.1
1,032,448	+				-2.9
1,032,448	+				-0.5
1,032,449	-				-0.2
1,032,451	+				-1.4
1,032,469	-				-0.7
1,032,510	+				+0.7
1,032,510	+				-1.2
1,032,510	+				-2.7
1,032,510	+				+0.4
1,032,511	-				-0.5
1,032,511	-				+0.4
1,032,511	-				+0.6
1,032,511	-				+1.7
1,032,532	+				-1.0
1,032,630	-				-0.5
1,032,630	-				-0.2
1,032,645	-				-0.1
1,032,697	+				-0.5
1,032,697	+				-0.6
1,032,697	+				+0.3
1,032,698	-				+0.3
1,032,698	-				-1.5
1,032,698	-				+0.8
1,032,698	-				+1.0
1,032,698	-				+0.1
1,032,701	+		Sama_0847	0.10	+0.6
1,032,701	+		Sama_0847	0.10	-1.3
1,032,702	-		Sama_0847	0.10	-0.9
1,032,702	-		Sama_0847	0.10	+0.7
1,032,702	-		Sama_0847	0.10	-1.4
1,032,702	-		Sama_0847	0.10	-1.1
1,032,702	-		Sama_0847	0.10	-0.7
1,032,780	+		Sama_0847	0.14	+0.5
1,032,780	+		Sama_0847	0.14	+1.4
1,032,793	+		Sama_0847	0.15	-0.8
1,032,814	+		Sama_0847	0.16	-1.5
1,032,815	-		Sama_0847	0.16	+1.1
1,032,815	-		Sama_0847	0.16	+2.0
1,032,834	+		Sama_0847	0.16	+0.4
1,032,835	-		Sama_0847	0.17	-0.9
1,032,868	+		Sama_0847	0.18	-0.3
1,033,052	+		Sama_0847	0.27	+1.3
1,033,052	+		Sama_0847	0.27	+0.1
1,033,052	+		Sama_0847	0.27	-0.2
1,033,053	-		Sama_0847	0.27	-0.5
1,033,053	-		Sama_0847	0.27	+0.8
1,033,053	-		Sama_0847	0.27	+0.2
1,033,172	-		Sama_0847	0.33	-0.4
1,033,190	+		Sama_0847	0.33	-0.2
1,033,190	+		Sama_0847	0.33	+0.0
1,033,190	+		Sama_0847	0.33	-1.8
1,033,191	-		Sama_0847	0.33	+1.5
1,033,191	-		Sama_0847	0.33	-0.8
1,033,191	-		Sama_0847	0.33	+0.5
1,033,191	-		Sama_0847	0.33	-1.8
1,033,191	-		Sama_0847	0.33	-1.3
1,033,225	-		Sama_0847	0.35	+1.0
1,033,327	+		Sama_0847	0.40	-1.8
1,033,327	+		Sama_0847	0.40	+0.5
1,033,362	+		Sama_0847	0.42	+0.0
1,033,362	+		Sama_0847	0.42	-2.1
1,033,362	+		Sama_0847	0.42	-0.2
1,033,362	+		Sama_0847	0.42	+0.9
1,033,362	+		Sama_0847	0.42	+0.0
1,033,362	+		Sama_0847	0.42	+0.5
1,033,362	+		Sama_0847	0.42	+0.5
1,033,362	+		Sama_0847	0.42	+0.5
1,033,362	+		Sama_0847	0.42	+0.3
1,033,363	-		Sama_0847	0.42	-2.1
1,033,363	-		Sama_0847	0.42	-1.3
1,033,363	-		Sama_0847	0.42	+1.5
1,033,363	-		Sama_0847	0.42	+2.2
1,033,363	-		Sama_0847	0.42	+0.2
1,033,364	+		Sama_0847	0.42	+0.1
1,033,364	+		Sama_0847	0.42	-0.4
1,033,364	+		Sama_0847	0.42	-0.3
1,033,364	+		Sama_0847	0.42	+1.4
1,033,364	+		Sama_0847	0.42	+0.2
1,033,364	+		Sama_0847	0.42	+0.1
1,033,364	+		Sama_0847	0.42	-1.1
1,033,364	+		Sama_0847	0.42	+0.4
1,033,364	+		Sama_0847	0.42	-0.8
1,033,364	+		Sama_0847	0.42	+0.3
1,033,364	+		Sama_0847	0.42	-1.7
1,033,365	-		Sama_0847	0.42	-1.1
1,033,365	-		Sama_0847	0.42	-1.5
1,033,365	-		Sama_0847	0.42	+0.7
1,033,365	-		Sama_0847	0.42	-0.8
1,033,365	-		Sama_0847	0.42	+0.0
1,033,365	-		Sama_0847	0.42	-1.4
1,033,365	-		Sama_0847	0.42	+0.5
1,033,365	-		Sama_0847	0.42	-3.0
1,033,498	+		Sama_0847	0.48	+0.9
1,033,499	-		Sama_0847	0.48	+0.6
1,033,499	-		Sama_0847	0.48	+0.6
1,033,500	+		Sama_0847	0.48	-0.8
1,033,500	+		Sama_0847	0.48	-0.3
1,033,500	+		Sama_0847	0.48	-1.8
1,033,500	+		Sama_0847	0.48	+0.2
1,033,501	-		Sama_0847	0.48	-1.4
1,033,570	+		Sama_0847	0.51	-0.3
1,033,570	+		Sama_0847	0.51	+0.6
1,033,572	+		Sama_0847	0.52	+0.3
1,033,572	+		Sama_0847	0.52	+1.9
1,033,572	+		Sama_0847	0.52	-0.9
1,033,572	+		Sama_0847	0.52	+0.1
1,033,573	-		Sama_0847	0.52	+0.4
1,033,573	-		Sama_0847	0.52	-0.6
1,033,611	+		Sama_0847	0.53	+0.7
1,033,612	-		Sama_0847	0.53	+0.3
1,033,613	+		Sama_0847	0.53	+0.6
1,033,613	+		Sama_0847	0.53	-1.5
1,033,613	+		Sama_0847	0.53	+0.1
1,033,613	+		Sama_0847	0.53	+0.3
1,033,614	-		Sama_0847	0.54	-0.3
1,033,614	-		Sama_0847	0.54	-0.5
1,033,614	-		Sama_0847	0.54	-0.9
1,033,614	-		Sama_0847	0.54	+0.5
1,033,647	-		Sama_0847	0.55	+1.8
1,033,651	+		Sama_0847	0.55	-1.5
1,033,651	+		Sama_0847	0.55	-0.8
1,033,652	-		Sama_0847	0.55	+1.7
1,033,652	-		Sama_0847	0.55	-2.4
1,033,652	-		Sama_0847	0.55	-0.1
1,033,653	+		Sama_0847	0.55	+1.5
1,033,699	-		Sama_0847	0.58	+1.0
1,033,742	+		Sama_0847	0.60	+0.1
1,033,742	+		Sama_0847	0.60	-1.3
1,033,742	+		Sama_0847	0.60	-0.2
1,033,742	+		Sama_0847	0.60	-0.9
1,033,742	+		Sama_0847	0.60	-0.5
1,033,743	-		Sama_0847	0.60	+0.2
1,033,743	-		Sama_0847	0.60	+0.9
1,033,743	-		Sama_0847	0.60	-1.2
1,033,743	-		Sama_0847	0.60	+0.9
1,033,743	-		Sama_0847	0.60	-1.6
1,033,743	-		Sama_0847	0.60	-1.5
1,033,743	-		Sama_0847	0.60	-1.1
1,033,743	-		Sama_0847	0.60	+1.3
1,033,749	-		Sama_0847	0.60	+0.9
1,033,749	-		Sama_0847	0.60	-1.7
1,033,749	-		Sama_0847	0.60	+0.9
1,033,749	-		Sama_0847	0.60	-1.2
1,033,753	+		Sama_0847	0.60	-1.9
1,033,753	+		Sama_0847	0.60	-0.8
1,033,753	+		Sama_0847	0.60	-0.5
1,033,753	+		Sama_0847	0.60	+0.1
1,033,753	+		Sama_0847	0.60	-1.3
1,033,753	+		Sama_0847	0.60	-1.8
1,033,754	-		Sama_0847	0.60	+0.5
1,033,754	-		Sama_0847	0.60	-0.8
1,033,754	-		Sama_0847	0.60	-2.0
1,033,850	+		Sama_0847	0.65	-0.8
1,033,851	-		Sama_0847	0.65	+0.7
1,034,002	+		Sama_0847	0.72	+0.0
1,034,003	-		Sama_0847	0.72	-0.1
1,034,003	-		Sama_0847	0.72	+0.0
1,034,038	+		Sama_0847	0.74	-0.9
1,034,039	-		Sama_0847	0.74	+0.5
1,034,039	-		Sama_0847	0.74	+1.2
1,034,050	+		Sama_0847	0.74	-0.6
1,034,051	-		Sama_0847	0.74	+1.1
1,034,051	-		Sama_0847	0.74	-0.5
1,034,096	+		Sama_0847	0.76	-1.4
1,034,096	+		Sama_0847	0.76	-0.3
1,034,096	+		Sama_0847	0.76	-0.1
1,034,096	+		Sama_0847	0.76	-1.7
1,034,096	+		Sama_0847	0.76	-1.4
1,034,096	+		Sama_0847	0.76	+1.7
1,034,097	-		Sama_0847	0.77	-0.1
1,034,097	-		Sama_0847	0.77	-1.8
1,034,097	-		Sama_0847	0.77	+0.0
1,034,098	+		Sama_0847	0.77	+1.7
1,034,098	+		Sama_0847	0.77	-0.1
1,034,098	+		Sama_0847	0.77	+0.8
1,034,098	+		Sama_0847	0.77	-0.5
1,034,098	+		Sama_0847	0.77	-0.1
1,034,098	+		Sama_0847	0.77	+0.3
1,034,098	+		Sama_0847	0.77	-1.7
1,034,098	+		Sama_0847	0.77	+0.6
1,034,098	+		Sama_0847	0.77	+0.1
1,034,098	+		Sama_0847	0.77	+0.3
1,034,099	-		Sama_0847	0.77	+0.7
1,034,099	-		Sama_0847	0.77	-0.9
1,034,099	-		Sama_0847	0.77	-1.1
1,034,099	-		Sama_0847	0.77	-0.2
1,034,099	-		Sama_0847	0.77	-0.1
1,034,215	+		Sama_0847	0.82	-2.1
1,034,252	+		Sama_0847	0.84	-0.8
1,034,252	+		Sama_0847	0.84	+1.5
1,034,253	-		Sama_0847	0.84	-1.7
1,034,253	-		Sama_0847	0.84	+0.9
1,034,261	+		Sama_0847	0.84	-0.3
1,034,261	+		Sama_0847	0.84	-1.6
1,034,262	-		Sama_0847	0.84	-1.5
1,034,262	-		Sama_0847	0.84	+1.5
1,034,351	+		Sama_0847	0.89	-1.7
1,034,351	+		Sama_0847	0.89	+0.8
1,034,351	+		Sama_0847	0.89	-0.8
1,034,351	+		Sama_0847	0.89	+0.3
1,034,351	+		Sama_0847	0.89	-0.9
1,034,352	-		Sama_0847	0.89	+0.3
1,034,352	-		Sama_0847	0.89	+0.3
1,034,352	-		Sama_0847	0.89	-2.4
1,034,353	+		Sama_0847	0.89	-0.1
1,034,353	+		Sama_0847	0.89	-0.4
1,034,353	+		Sama_0847	0.89	+0.5
1,034,353	+		Sama_0847	0.89	+0.4
1,034,353	+		Sama_0847	0.89	+0.4
1,034,354	-		Sama_0847	0.89	-0.5
1,034,354	-		Sama_0847	0.89	+1.7
1,034,354	-		Sama_0847	0.89	-0.8
1,034,354	-		Sama_0847	0.89	-0.2
1,034,354	-		Sama_0847	0.89	-0.3
1,034,354	-		Sama_0847	0.89	-0.5
1,034,364	+		Sama_0847	0.89	+1.9
1,034,364	+		Sama_0847	0.89	+1.2
1,034,365	-		Sama_0847	0.89	-0.8
1,034,365	-		Sama_0847	0.89	-0.4
1,034,420	+				-0.2
1,034,421	-				+1.4
1,034,526	+				-0.7
1,034,605	+				-0.3
1,034,609	+				-0.2
1,034,644	+				-1.7
1,034,644	+				+1.3
1,034,645	-				+0.5
1,034,645	-				+0.1
1,034,801	+	anmK	Sama_0848	0.14	-1.9
1,034,801	+	anmK	Sama_0848	0.14	+1.5
1,034,810	+	anmK	Sama_0848	0.15	-0.7
1,034,853	-	anmK	Sama_0848	0.19	-1.7
1,034,853	-	anmK	Sama_0848	0.19	-0.3
1,034,874	+	anmK	Sama_0848	0.21	-1.3
1,034,874	+	anmK	Sama_0848	0.21	-1.4
1,034,874	+	anmK	Sama_0848	0.21	+0.2
1,034,875	-	anmK	Sama_0848	0.21	-0.7
1,034,875	-	anmK	Sama_0848	0.21	-0.2
1,034,875	-	anmK	Sama_0848	0.21	+0.4
1,034,875	-	anmK	Sama_0848	0.21	-0.3
1,034,934	+	anmK	Sama_0848	0.26	-1.3
1,034,935	-	anmK	Sama_0848	0.26	+0.3
1,035,043	+	anmK	Sama_0848	0.36	-0.1
1,035,043	+	anmK	Sama_0848	0.36	-3.1
1,035,053	+	anmK	Sama_0848	0.37	+0.8
1,035,053	+	anmK	Sama_0848	0.37	+0.5
1,035,054	-	anmK	Sama_0848	0.37	-1.3
1,035,058	+	anmK	Sama_0848	0.37	+0.1
1,035,059	-	anmK	Sama_0848	0.37	-0.4
1,035,059	-	anmK	Sama_0848	0.37	-0.1
1,035,089	+	anmK	Sama_0848	0.40	-1.2
1,035,089	+	anmK	Sama_0848	0.40	-0.8
1,035,090	-	anmK	Sama_0848	0.40	+1.2
1,035,090	-	anmK	Sama_0848	0.40	-0.3
1,035,102	-	anmK	Sama_0848	0.41	-0.5
1,035,147	+	anmK	Sama_0848	0.45	-0.4
1,035,148	-	anmK	Sama_0848	0.45	-0.3
1,035,156	+	anmK	Sama_0848	0.46	+0.1
1,035,156	+	anmK	Sama_0848	0.46	+0.6
1,035,157	-	anmK	Sama_0848	0.46	-0.2
1,035,168	+	anmK	Sama_0848	0.47	-1.0
1,035,168	+	anmK	Sama_0848	0.47	+0.5
1,035,168	+	anmK	Sama_0848	0.47	-1.1
1,035,168	+	anmK	Sama_0848	0.47	-1.0
1,035,168	+	anmK	Sama_0848	0.47	-0.5
1,035,168	+	anmK	Sama_0848	0.47	-0.4
1,035,169	-	anmK	Sama_0848	0.47	-1.7
1,035,204	+	anmK	Sama_0848	0.50	-0.1
1,035,205	-	anmK	Sama_0848	0.50	+0.5
1,035,236	+	anmK	Sama_0848	0.53	+1.5
1,035,237	-	anmK	Sama_0848	0.53	+0.5
1,035,245	+	anmK	Sama_0848	0.54	-0.7
1,035,252	+	anmK	Sama_0848	0.55	-0.5
1,035,252	+	anmK	Sama_0848	0.55	-0.7
1,035,252	+	anmK	Sama_0848	0.55	+1.5
1,035,252	+	anmK	Sama_0848	0.55	-1.0
1,035,253	-	anmK	Sama_0848	0.55	+0.9
1,035,253	-	anmK	Sama_0848	0.55	+0.4
1,035,253	-	anmK	Sama_0848	0.55	-0.5
1,035,253	-	anmK	Sama_0848	0.55	+0.0
1,035,284	+	anmK	Sama_0848	0.57	-1.3
1,035,345	-	anmK	Sama_0848	0.63	+0.4
1,035,345	-	anmK	Sama_0848	0.63	+0.2
1,035,378	-	anmK	Sama_0848	0.66	-1.1
1,035,378	-	anmK	Sama_0848	0.66	-1.7
1,035,453	-	anmK	Sama_0848	0.73	+0.1
1,035,494	+	anmK	Sama_0848	0.76	-1.3
1,035,494	+	anmK	Sama_0848	0.76	+0.8
1,035,494	+	anmK	Sama_0848	0.76	-0.6
1,035,494	+	anmK	Sama_0848	0.76	-0.4
1,035,494	+	anmK	Sama_0848	0.76	+0.4
1,035,494	+	anmK	Sama_0848	0.76	-0.3
1,035,494	+	anmK	Sama_0848	0.76	-0.6
1,035,494	+	anmK	Sama_0848	0.76	-0.7
1,035,494	+	anmK	Sama_0848	0.76	-2.4
1,035,494	+	anmK	Sama_0848	0.76	+0.7
1,035,495	-	anmK	Sama_0848	0.76	-0.7
1,035,495	-	anmK	Sama_0848	0.76	-0.3
1,035,495	-	anmK	Sama_0848	0.76	+0.3
1,035,495	-	anmK	Sama_0848	0.76	+0.2
1,035,495	-	anmK	Sama_0848	0.76	-0.6
1,035,495	-	anmK	Sama_0848	0.76	+0.1
1,035,495	-	anmK	Sama_0848	0.76	-1.3
1,035,495	-	anmK	Sama_0848	0.76	-0.3
1,035,495	-	anmK	Sama_0848	0.76	-1.1
1,035,495	-	anmK	Sama_0848	0.76	-1.9
1,035,495	-	anmK	Sama_0848	0.76	-0.9
1,035,495	-	anmK	Sama_0848	0.76	+0.8
1,035,495	-	anmK	Sama_0848	0.76	-1.9
1,035,498	+	anmK	Sama_0848	0.77	+0.6
1,035,498	+	anmK	Sama_0848	0.77	-1.7
1,035,498	+	anmK	Sama_0848	0.77	-0.2
1,035,498	+	anmK	Sama_0848	0.77	-1.1
1,035,498	+	anmK	Sama_0848	0.77	-1.5
1,035,499	-	anmK	Sama_0848	0.77	-2.4
1,035,499	-	anmK	Sama_0848	0.77	+0.8
1,035,499	-	anmK	Sama_0848	0.77	-1.5
1,035,499	-	anmK	Sama_0848	0.77	+1.3
1,035,499	-	anmK	Sama_0848	0.77	+0.5