Strain Fitness in Shewanella amazonensis SB2B around Sama_0103

Experiment: Paraquat dichloride 0.03125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.03125 mg/ml
115,226	+		Sama_0102	0.13	-0.7
115,309	+		Sama_0102	0.21	+0.3
115,573	-		Sama_0102	0.46	-1.1
115,573	-		Sama_0102	0.46	-0.1
115,653	+		Sama_0102	0.53	-0.5
115,798	-		Sama_0102	0.67	-0.1
116,143	+				-0.3
116,143	+				-0.2
116,143	+				-0.7
116,143	+				-0.2
116,143	+				+0.5
116,143	+				+0.5
116,143	+				-1.2
116,143	+				+0.6
116,143	+				+0.4
116,143	+				+0.5
116,143	+				+0.7
116,144	-				-1.1
116,144	-				-3.9
116,144	-				-1.7
116,144	-				-2.9
116,144	-				-1.5
116,144	-				-1.3
116,144	-				-0.9
116,149	+				+0.6
116,150	-				-1.1
116,191	+				-0.2
116,191	+				-0.6
116,191	+				-2.5
116,191	+				-3.0
116,191	+				-1.7
116,191	+				-0.3
116,191	+				-1.1
116,191	+				-0.4
116,191	+				-1.5
116,191	+				+1.0
116,191	+				-2.4
116,246	+				-0.1
116,246	+				-0.9
116,333	+		Sama_0103	0.17	-1.4
116,333	+		Sama_0103	0.17	-2.9
116,333	+		Sama_0103	0.17	-1.3
116,333	+		Sama_0103	0.17	-2.2
116,540	-		Sama_0103	0.35	-1.5
116,583	+		Sama_0103	0.39	-1.7
116,629	+		Sama_0103	0.44	+0.9
116,647	+		Sama_0103	0.45	-2.8
116,665	+		Sama_0103	0.47	-1.9
116,665	+		Sama_0103	0.47	-2.3
116,665	+		Sama_0103	0.47	-2.5
116,666	-		Sama_0103	0.47	-2.2
116,666	-		Sama_0103	0.47	-1.1
116,723	+		Sama_0103	0.52	-1.5
116,724	-		Sama_0103	0.52	+0.9
116,724	-		Sama_0103	0.52	-1.8
116,776	+		Sama_0103	0.57	-0.1
116,776	+		Sama_0103	0.57	-1.7
116,776	+		Sama_0103	0.57	-3.3
116,776	+		Sama_0103	0.57	-0.5
116,776	+		Sama_0103	0.57	-3.2
116,831	+		Sama_0103	0.62	-1.4
116,831	+		Sama_0103	0.62	-2.1
116,831	+		Sama_0103	0.62	-2.3
116,831	+		Sama_0103	0.62	-1.6
116,832	-		Sama_0103	0.62	-0.7
116,832	-		Sama_0103	0.62	-2.1
116,832	-		Sama_0103	0.62	-2.5
116,877	-		Sama_0103	0.66	-3.3
116,932	+		Sama_0103	0.71	-1.6
116,933	-		Sama_0103	0.71	-0.1
116,942	-		Sama_0103	0.72	-2.8
116,944	+		Sama_0103	0.72	-0.9
116,944	+		Sama_0103	0.72	-2.5
116,989	+		Sama_0103	0.76	-1.7
117,217	+				-0.9
117,217	+				-1.4
117,223	+				-0.9
117,223	+				+1.5
117,224	-				-2.3
117,359	+		Sama_0104	0.10	-1.0
117,359	+		Sama_0104	0.10	-2.4
117,359	+		Sama_0104	0.10	+0.5
117,359	+		Sama_0104	0.10	-2.6
117,359	+		Sama_0104	0.10	-1.5
117,359	+		Sama_0104	0.10	-1.5
117,359	+		Sama_0104	0.10	+0.7
117,359	+		Sama_0104	0.10	-1.3
117,359	+		Sama_0104	0.10	+1.5
117,359	+		Sama_0104	0.10	-1.9
117,359	+		Sama_0104	0.10	-1.3
117,359	+		Sama_0104	0.10	-0.5
117,359	+		Sama_0104	0.10	-0.9
117,359	+		Sama_0104	0.10	-1.5
117,360	-		Sama_0104	0.10	-1.8
117,360	-		Sama_0104	0.10	-1.8
117,360	-		Sama_0104	0.10	-2.2
117,360	-		Sama_0104	0.10	-1.0
117,360	-		Sama_0104	0.10	-0.7
117,360	-		Sama_0104	0.10	-4.0
117,360	-		Sama_0104	0.10	-2.7
117,360	-		Sama_0104	0.10	-1.3
117,441	+		Sama_0104	0.18	-1.5
117,441	+		Sama_0104	0.18	-1.1
117,482	+		Sama_0104	0.21	-1.8
117,482	+		Sama_0104	0.21	-2.1
117,482	+		Sama_0104	0.21	-2.8
117,494	+		Sama_0104	0.22	-0.2
117,592	+		Sama_0104	0.31	-2.5
117,639	+		Sama_0104	0.36	-2.5
117,639	+		Sama_0104	0.36	-1.7
117,639	+		Sama_0104	0.36	-3.0
117,639	+		Sama_0104	0.36	+0.5
117,639	+		Sama_0104	0.36	-2.4
117,639	+		Sama_0104	0.36	-2.1
117,639	+		Sama_0104	0.36	-1.1
117,640	-		Sama_0104	0.36	-1.0
117,640	-		Sama_0104	0.36	-1.7
117,666	+		Sama_0104	0.38	-0.9
117,713	+		Sama_0104	0.42	-1.8
117,713	+		Sama_0104	0.42	-2.3
117,714	-		Sama_0104	0.43	-0.1
117,781	+		Sama_0104	0.49	-3.1
117,781	+		Sama_0104	0.49	-1.7
117,781	+		Sama_0104	0.49	-1.7
117,781	+		Sama_0104	0.49	-3.0
117,782	-		Sama_0104	0.49	+0.3
117,783	+		Sama_0104	0.49	-2.7
117,784	-		Sama_0104	0.49	-1.3
117,853	+		Sama_0104	0.55	-4.1
117,853	+		Sama_0104	0.55	-0.7
117,853	+		Sama_0104	0.55	-1.6
117,853	+		Sama_0104	0.55	-0.3
117,853	+		Sama_0104	0.55	-0.8
117,854	-		Sama_0104	0.55	-3.5
117,854	-		Sama_0104	0.55	-2.2
117,854	-		Sama_0104	0.55	-2.3
117,854	-		Sama_0104	0.55	-2.2
117,854	-		Sama_0104	0.55	-0.5
117,854	-		Sama_0104	0.55	-3.7
117,854	-		Sama_0104	0.55	-3.6
118,014	+		Sama_0104	0.70	-0.9
118,050	-		Sama_0104	0.73	-1.6
118,050	-		Sama_0104	0.73	-0.5
118,050	-		Sama_0104	0.73	-1.9
118,050	-		Sama_0104	0.73	-1.5
118,084	+		Sama_0104	0.76	+0.3
118,084	+		Sama_0104	0.76	-1.1