Strain Fitness in Shewanella amazonensis SB2B around Sama_0091

Experiment: Paraquat dichloride 0.03125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.03125 mg/ml
101,346	-		Sama_0090	0.72	+0.9
101,346	-		Sama_0090	0.72	+1.0
101,371	+		Sama_0090	0.75	-0.2
101,498	+				-1.1
101,498	+				-0.1
101,498	+				+0.5
101,499	-				-0.5
101,499	-				-0.6
101,499	-				-1.9
101,499	-				-0.5
101,499	-				+0.3
101,499	-				-1.1
101,499	-				-0.5
101,561	+				-1.0
101,561	+				+0.2
101,561	+				+0.3
101,562	-				-0.6
101,578	+				+0.0
101,578	+				-0.1
101,578	+				-0.8
101,578	+				+0.3
101,579	-				+0.2
101,579	-				+0.3
101,579	-				-0.2
101,579	-				-0.4
101,579	-				+0.5
101,579	-				-2.9
101,580	+				-0.9
101,580	+				-1.8
101,580	+				-0.3
101,580	+				-1.7
101,580	+				-0.4
101,580	+				-1.7
101,580	+				-0.4
101,581	-				-1.5
101,581	-				+1.1
101,581	-				+0.6
101,581	-				-0.3
101,581	-				-0.4
101,581	-				-2.3
101,581	-				-1.0
101,581	-				+0.1
101,581	-				-0.8
101,610	+				-2.2
101,644	+				-1.2
101,645	-				-2.0
101,645	-				-0.0
101,645	-				-0.5
101,660	-				-0.5
101,660	-				-1.1
101,660	-				-1.2
101,660	-				-2.5
101,660	-				+0.4
101,660	-				-0.1
101,660	-				-0.5
101,660	-				-1.9
101,665	+				-0.7
101,665	+				+0.3
101,666	-				-1.7
101,666	-				-0.8
101,666	-				+0.1
101,666	-				-1.6
101,666	-				+0.9
101,666	-				-2.2
101,666	-				+0.4
101,666	-				-1.6
101,666	-				-1.1
101,666	-				-0.1
101,666	-				-1.2
101,672	+				+0.5
101,672	+				-0.6
101,672	+				-1.4
101,672	+				-1.2
101,672	+				-0.6
101,673	-				-1.6
101,673	-				-0.6
101,673	-				-0.7
101,673	-				-0.5
101,673	-				-0.9
101,673	-				-2.7
101,673	-				+0.2
101,673	-				+0.4
101,673	-				-0.4
101,673	-				-0.8
101,673	-				-1.9
101,673	-				-1.6
101,673	-				-1.0
101,673	-				+0.4
101,757	-				-1.1
101,788	+				+2.6
101,789	-				-0.5
101,789	-				-0.7
101,789	-				+1.1
101,789	-				+0.2
101,789	-				-0.1
101,789	-				-0.2
101,789	-				+0.3
101,813	+				-0.7
101,838	-				+0.7
101,838	-				-1.9
101,838	-				-1.5
101,841	+				-0.5
101,842	-				+0.1
101,861	+				-0.1
101,861	+				-0.7
101,862	-				+0.7
101,862	-				-0.0
101,862	-				-0.5
101,862	-				-2.0
101,862	-				-0.8
101,875	+				-0.9
101,875	+				-0.9
101,875	+				-0.0
101,876	-				+0.1
101,876	-				-0.5
101,876	-				-0.5
101,876	-				-1.4
101,876	-				-0.1
101,924	+				+2.5
101,925	-				-0.4
101,925	-				-0.7
101,925	-				-0.8
101,955	+				-0.9
101,982	-				+0.6
102,014	-				+0.9
102,020	+				-0.7
102,049	-				-0.4
102,056	-				-0.2
102,056	-				-0.2
102,056	-				-0.6
102,056	-				-0.3
102,058	+				-1.6
102,061	+				-1.8
102,062	-				-2.8
102,062	-				-0.7
102,081	-				-2.1
102,084	-				-2.1
102,084	-				+0.5
102,087	-				-0.7
102,087	-				-1.0
102,105	+				-1.2
102,105	+				-1.6
102,106	-				+0.1
102,113	+				+0.1
102,113	+				+0.2
102,125	-				-0.4
102,131	+				-0.8
102,143	+				+0.0
102,151	+				+0.9
102,151	+				-2.6
102,151	+				-1.7
102,152	-				-0.7
102,170	-				-1.0
102,170	-				-0.3
102,202	-				+1.3
102,315	-				+0.8
102,315	-				-0.3
102,315	-				-0.3
102,315	-				+0.2
102,315	-				+0.9
102,315	-				+0.3
102,324	+				-0.1
102,332	+				-0.7
102,332	+				-0.9
102,333	-				-0.6
102,333	-				-1.1
102,333	-				-3.0
102,333	-				-3.0
102,408	+		Sama_0091	0.15	-2.7
102,409	-		Sama_0091	0.15	+1.9
102,449	+		Sama_0091	0.22	-0.1
102,449	+		Sama_0091	0.22	-1.3
102,449	+		Sama_0091	0.22	-0.5
102,449	+		Sama_0091	0.22	-2.6
102,450	-		Sama_0091	0.22	-1.5
102,450	-		Sama_0091	0.22	-2.9
102,450	-		Sama_0091	0.22	-1.1
102,450	-		Sama_0091	0.22	-3.3
102,450	-		Sama_0091	0.22	-1.5
102,501	+		Sama_0091	0.30	-2.7
102,526	-		Sama_0091	0.34	-1.5
102,563	+		Sama_0091	0.40	-1.2
102,563	+		Sama_0091	0.40	-2.9
102,564	-		Sama_0091	0.40	-2.8
102,564	-		Sama_0091	0.40	-0.8
102,586	+		Sama_0091	0.44	+0.3
102,586	+		Sama_0091	0.44	+1.5
102,648	+		Sama_0091	0.54	-2.2
102,648	+		Sama_0091	0.54	-0.5
102,670	+		Sama_0091	0.57	-1.5
102,687	+		Sama_0091	0.60	-1.5
102,687	+		Sama_0091	0.60	-0.7
102,688	-		Sama_0091	0.60	+0.3
102,688	-		Sama_0091	0.60	-1.1
102,688	-		Sama_0091	0.60	-2.2
102,758	+		Sama_0091	0.72	-2.5
102,759	-		Sama_0091	0.72	-0.1
102,759	-		Sama_0091	0.72	+0.3
102,759	-		Sama_0091	0.72	+0.3
102,762	+		Sama_0091	0.72	-1.1
102,762	+		Sama_0091	0.72	-1.1
102,762	+		Sama_0091	0.72	+1.3
102,763	-		Sama_0091	0.72	-0.7
102,763	-		Sama_0091	0.72	-0.6
102,763	-		Sama_0091	0.72	-2.8
102,763	-		Sama_0091	0.72	-0.4
102,763	-		Sama_0091	0.72	-0.7
102,763	-		Sama_0091	0.72	-1.1
102,763	-		Sama_0091	0.72	-0.7
102,763	-		Sama_0091	0.72	-1.8
102,788	+		Sama_0091	0.76	-0.5
102,788	+		Sama_0091	0.76	+0.3
102,789	-		Sama_0091	0.77	-0.9
102,792	+		Sama_0091	0.77	-2.2
102,792	+		Sama_0091	0.77	+0.9
102,792	+		Sama_0091	0.77	-0.7
102,792	+		Sama_0091	0.77	-1.3
102,793	-		Sama_0091	0.77	-1.2
102,793	-		Sama_0091	0.77	-1.1
102,793	-		Sama_0091	0.77	-1.7
102,793	-		Sama_0091	0.77	-1.3
102,793	-		Sama_0091	0.77	-1.5
102,879	+				-0.5
102,880	+				-3.2
102,880	-				-1.2
102,880	-				-0.1
102,888	+				-2.1
102,889	-				-0.5
102,889	-				-1.0
102,894	+				-1.4
102,894	+				-0.7
102,894	+				+0.5
102,894	+				-0.5
102,894	+				-1.7
102,894	+				+0.1
102,894	+				-0.5
102,894	+				-2.5
102,894	+				-0.1
102,894	+				-0.7
102,894	+				-0.3
102,895	-				-2.8
102,895	-				-1.8
102,895	-				-1.1
102,895	-				-0.1
102,895	-				-1.1
102,895	-				-1.1
102,895	-				-0.9
102,895	-				+0.3
102,895	-				-1.7
102,895	-				-2.4
102,895	-				-1.5
102,895	-				-2.3
102,895	-				-0.1
102,895	-				-1.4
102,895	-				-1.0
102,895	-				-0.5
102,895	-				-1.8
102,922	+				+0.5
102,933	+				-1.5
102,933	+				-2.7
102,933	+				-0.8
102,958	+				-0.8
102,958	+				-2.6
102,959	-				-0.1
102,959	-				-0.7
102,996	+				-1.1
102,996	+				-0.7
102,999	+				-1.5
103,001	+				-0.7
103,001	+				-1.8
103,001	+				+0.1
103,001	+				-1.6
103,001	+				-2.3
103,001	+				-2.2
103,001	+				-0.6
103,006	+				-0.7
103,006	+				-0.9
103,006	+				-1.3
103,006	+				-0.6
103,006	+				-0.1
103,008	+				-0.7
103,008	+				-0.1
103,008	+				-2.1
103,024	+				-0.9
103,049	+				-0.5
103,088	+				+2.2
103,088	+				+0.0
103,812	+				-0.1
103,812	+				-1.2
103,813	-				+0.3
103,876	+				+2.2
103,876	+				+0.6
103,876	-				-0.0
103,876	+				-0.8
103,876	+				-0.7
103,876	+				+0.6
103,876	+				-0.5
103,877	-				+0.9
103,877	-				-0.0
103,877	-				+0.7
103,877	-				+1.1
103,919	+				-0.7
103,920	-				+0.9
103,920	-				-0.0