Strain Fitness in Shewanella amazonensis SB2B around Sama_3358

Experiment: Bacitracin 0.125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bacitracin 0.125 mg/ml
3,985,053	+				-3.0
3,985,053	+				-2.1
3,985,054	-				-2.5
3,985,054	-				-1.7
3,985,054	-				-1.1
3,985,054	-				-1.6
3,985,082	-				-1.4
3,985,116	+		Sama_3357	0.12	-0.9
3,985,117	-		Sama_3357	0.12	-2.6
3,985,246	+		Sama_3357	0.35	-1.4
3,985,247	-		Sama_3357	0.35	-2.3
3,985,308	+		Sama_3357	0.46	-1.8
3,985,308	+		Sama_3357	0.46	-1.4
3,985,315	+		Sama_3357	0.47	-2.0
3,985,348	-		Sama_3357	0.53	-2.7
3,985,348	-		Sama_3357	0.53	-0.8
3,985,348	-		Sama_3357	0.53	-0.0
3,985,348	-		Sama_3357	0.53	-0.8
3,985,422	+		Sama_3357	0.66	-0.8
3,985,469	-		Sama_3357	0.74	-1.1
3,985,551	+		Sama_3357	0.89	-2.7
3,985,565	-				-1.4
3,985,565	-				-3.8
3,985,582	+				-1.6
3,985,582	+				-1.8
3,985,583	-				-3.6
3,985,592	-				-2.0
3,985,751	+		Sama_3358	0.17	+0.5
3,985,751	+		Sama_3358	0.17	+0.2
3,985,752	-		Sama_3358	0.17	+0.5
3,985,768	+		Sama_3358	0.19	+0.2
3,985,768	+		Sama_3358	0.19	+1.0
3,985,784	+		Sama_3358	0.21	+3.2
3,985,785	-		Sama_3358	0.21	-0.6
3,985,785	-		Sama_3358	0.21	-0.2
3,985,785	-		Sama_3358	0.21	+0.2
3,985,785	-		Sama_3358	0.21	-0.7
3,985,785	-		Sama_3358	0.21	-0.1
3,985,831	+		Sama_3358	0.26	-2.0
3,985,831	+		Sama_3358	0.26	+1.2
3,985,831	+		Sama_3358	0.26	+0.4
3,985,832	-		Sama_3358	0.26	+0.6
3,985,832	-		Sama_3358	0.26	-0.4
3,985,832	-		Sama_3358	0.26	+0.0
3,985,832	-		Sama_3358	0.26	+0.1
3,985,832	-		Sama_3358	0.26	+1.0
3,985,839	+		Sama_3358	0.27	-0.2
3,985,839	+		Sama_3358	0.27	-0.0
3,985,872	+		Sama_3358	0.31	+0.6
3,985,872	+		Sama_3358	0.31	-0.8
3,985,898	+		Sama_3358	0.34	-1.4
3,985,916	+		Sama_3358	0.36	+0.8
3,985,916	+		Sama_3358	0.36	-1.1
3,985,916	+		Sama_3358	0.36	+0.1
3,985,917	-		Sama_3358	0.36	+0.6
3,985,917	-		Sama_3358	0.36	+2.6
3,985,917	-		Sama_3358	0.36	+0.4
3,985,943	+		Sama_3358	0.39	-0.8
3,985,944	-		Sama_3358	0.39	-0.2
3,985,944	-		Sama_3358	0.39	+0.8
3,985,945	+		Sama_3358	0.39	+0.7
3,985,945	+		Sama_3358	0.39	-0.1
3,985,945	+		Sama_3358	0.39	+0.2
3,985,945	+		Sama_3358	0.39	-0.9
3,985,946	-		Sama_3358	0.39	-0.3
3,985,946	-		Sama_3358	0.39	+1.4
3,985,946	-		Sama_3358	0.39	-0.6
3,985,946	-		Sama_3358	0.39	-1.5
3,985,946	-		Sama_3358	0.39	+0.6
3,985,946	-		Sama_3358	0.39	-0.8
3,985,953	+		Sama_3358	0.40	-0.1
3,985,953	+		Sama_3358	0.40	+1.3
3,985,953	+		Sama_3358	0.40	-0.9
3,985,953	+		Sama_3358	0.40	+1.6
3,985,954	-		Sama_3358	0.40	+0.2
3,985,954	-		Sama_3358	0.40	+0.3
3,985,959	+		Sama_3358	0.41	+0.5
3,985,959	+		Sama_3358	0.41	-0.4
3,985,960	-		Sama_3358	0.41	-0.6
3,985,960	-		Sama_3358	0.41	-0.8
3,985,960	-		Sama_3358	0.41	-1.2
3,985,960	-		Sama_3358	0.41	-0.0
3,985,960	-		Sama_3358	0.41	-0.6
3,985,960	-		Sama_3358	0.41	+1.8
3,985,960	-		Sama_3358	0.41	+0.3
3,985,960	-		Sama_3358	0.41	+0.1
3,985,960	-		Sama_3358	0.41	+0.5
3,985,960	-		Sama_3358	0.41	+0.2
3,985,960	-		Sama_3358	0.41	+0.8
3,985,960	-		Sama_3358	0.41	+0.4
3,985,960	-		Sama_3358	0.41	+0.2
3,985,960	-		Sama_3358	0.41	-1.1
3,985,960	-		Sama_3358	0.41	-0.6
3,985,960	-		Sama_3358	0.41	+0.0
3,986,168	+		Sama_3358	0.64	-2.0
3,986,169	-		Sama_3358	0.65	+0.8
3,986,169	-		Sama_3358	0.65	-0.7
3,986,169	-		Sama_3358	0.65	-0.4
3,986,169	-		Sama_3358	0.65	-1.1
3,986,169	-		Sama_3358	0.65	+0.9
3,986,169	-		Sama_3358	0.65	+0.2
3,986,182	+		Sama_3358	0.66	+0.4
3,986,182	+		Sama_3358	0.66	+0.4
3,986,283	+		Sama_3358	0.78	+1.7
3,986,283	+		Sama_3358	0.78	-0.2
3,986,284	-		Sama_3358	0.78	-1.4
3,986,284	-		Sama_3358	0.78	-0.7
3,986,346	+		Sama_3358	0.85	-0.6
3,986,346	+		Sama_3358	0.85	+0.7
3,986,346	+		Sama_3358	0.85	+0.9
3,986,347	-		Sama_3358	0.85	-0.2
3,986,347	-		Sama_3358	0.85	+1.0
3,986,347	-		Sama_3358	0.85	-1.4
3,986,413	+				-0.6
3,986,414	-				+0.6
3,986,414	-				-0.4
3,986,482	-				-0.0
3,986,514	+				-0.1
3,986,514	+				+0.7
3,986,514	+				+0.9
3,986,514	+				-0.2
3,986,514	+				-1.6
3,986,514	+				+0.2
3,986,514	+				+0.3
3,986,514	+				-0.0
3,986,515	-				+0.4
3,986,515	-				-1.1
3,986,515	-				+0.1
3,986,515	-				-0.2
3,986,516	+				+0.2
3,986,516	+				+1.4
3,986,517	-				+0.7
3,986,517	-				+0.1
3,986,517	-				+0.3
3,986,527	+				-0.9
3,986,528	-				-0.7
3,986,566	-				-0.1
3,986,608	+				-0.5
3,986,608	+				-0.0
3,986,608	+				+0.8
3,986,608	+				-0.1
3,986,897	+		Sama_3359	0.33	+0.0
3,986,897	+		Sama_3359	0.33	-0.4
3,986,897	+		Sama_3359	0.33	-0.7
3,986,898	-		Sama_3359	0.33	-0.1
3,986,898	-		Sama_3359	0.33	-1.3
3,986,898	-		Sama_3359	0.33	-0.2
3,986,898	-		Sama_3359	0.33	-0.3
3,986,898	-		Sama_3359	0.33	+0.8
3,987,022	+		Sama_3359	0.47	+0.2
3,987,022	+		Sama_3359	0.47	+0.6
3,987,023	-		Sama_3359	0.47	+0.2
3,987,028	+		Sama_3359	0.48	+0.1
3,987,028	+		Sama_3359	0.48	-0.8
3,987,028	+		Sama_3359	0.48	+0.4
3,987,089	-		Sama_3359	0.55	-1.4
3,987,192	+		Sama_3359	0.66	-0.1
3,987,192	+		Sama_3359	0.66	+0.9
3,987,192	+		Sama_3359	0.66	+0.2
3,987,192	+		Sama_3359	0.66	-0.1
3,987,192	+		Sama_3359	0.66	+0.3
3,987,192	+		Sama_3359	0.66	+0.2
3,987,193	-		Sama_3359	0.66	-1.2
3,987,193	-		Sama_3359	0.66	+1.0
3,987,193	-		Sama_3359	0.66	-0.3
3,987,193	-		Sama_3359	0.66	-0.0
3,987,193	-		Sama_3359	0.66	+0.4
3,987,193	-		Sama_3359	0.66	+0.3
3,987,193	-		Sama_3359	0.66	-0.9
3,987,193	-		Sama_3359	0.66	+0.0
3,987,260	+		Sama_3359	0.74	-0.3
3,987,260	+		Sama_3359	0.74	+0.1
3,987,260	+		Sama_3359	0.74	-0.2
3,987,260	+		Sama_3359	0.74	+0.1
3,987,260	+		Sama_3359	0.74	-1.3
3,987,260	+		Sama_3359	0.74	-0.0
3,987,260	+		Sama_3359	0.74	+0.3
3,987,261	-		Sama_3359	0.74	-0.0
3,987,261	-		Sama_3359	0.74	+1.0
3,987,261	-		Sama_3359	0.74	-0.1
3,987,261	-		Sama_3359	0.74	-0.2
3,987,270	+		Sama_3359	0.75	-0.2
3,987,270	+		Sama_3359	0.75	-0.8
3,987,270	+		Sama_3359	0.75	-0.1
3,987,270	+		Sama_3359	0.75	+0.4
3,987,270	+		Sama_3359	0.75	+0.8
3,987,270	+		Sama_3359	0.75	+0.4
3,987,270	+		Sama_3359	0.75	-0.5
3,987,270	+		Sama_3359	0.75	-1.8
3,987,270	+		Sama_3359	0.75	+0.1
3,987,270	+		Sama_3359	0.75	-0.3
3,987,270	+		Sama_3359	0.75	+0.3
3,987,270	+		Sama_3359	0.75	-0.0
3,987,271	-		Sama_3359	0.75	-0.8
3,987,271	-		Sama_3359	0.75	-1.0
3,987,271	-		Sama_3359	0.75	+1.2
3,987,271	-		Sama_3359	0.75	+1.5
3,987,271	-		Sama_3359	0.75	-0.4
3,987,271	-		Sama_3359	0.75	+0.2
3,987,271	-		Sama_3359	0.75	-0.0
3,987,271	-		Sama_3359	0.75	-0.0
3,987,282	+		Sama_3359	0.76	-0.1
3,987,283	-		Sama_3359	0.76	+0.8
3,987,309	+		Sama_3359	0.79	+1.4
3,987,309	+		Sama_3359	0.79	-2.2
3,987,309	+		Sama_3359	0.79	-0.5
3,987,309	+		Sama_3359	0.79	+0.3
3,987,310	-		Sama_3359	0.79	-0.4
3,987,310	-		Sama_3359	0.79	+0.4