Strain Fitness in Shewanella amazonensis SB2B around Sama_2743

Experiment: Bacitracin 0.125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bacitracin 0.125 mg/ml
3,277,463	+		Sama_2742	0.59	-3.5
3,277,463	+		Sama_2742	0.59	-1.2
3,277,466	-		Sama_2742	0.59	-2.3
3,277,466	-		Sama_2742	0.59	-1.8
3,277,466	-		Sama_2742	0.59	-1.7
3,277,466	-		Sama_2742	0.59	-2.9
3,277,774	+		Sama_2742	0.76	+0.2
3,277,816	+		Sama_2742	0.78	-0.3
3,277,817	-		Sama_2742	0.78	+0.1
3,277,832	+		Sama_2742	0.79	-0.1
3,277,832	+		Sama_2742	0.79	+0.6
3,277,832	+		Sama_2742	0.79	+0.1
3,277,833	-		Sama_2742	0.79	-0.1
3,277,833	-		Sama_2742	0.79	-0.8
3,277,833	-		Sama_2742	0.79	+0.2
3,277,921	+		Sama_2742	0.84	+0.6
3,278,036	+				-0.0
3,278,036	+				+1.7
3,278,037	-				-0.6
3,278,037	-				-0.4
3,278,037	-				-0.8
3,278,038	+				-0.4
3,278,038	+				-0.4
3,278,039	-				-0.0
3,278,039	-				+0.3
3,278,108	+				+0.6
3,278,109	-				-0.2
3,278,109	-				+0.4
3,278,109	-				-1.6
3,278,110	+				+0.1
3,278,110	+				-1.2
3,278,110	+				-0.0
3,278,111	-				-2.2
3,278,131	+				-0.1
3,278,131	+				-0.0
3,278,132	-				-0.4
3,278,304	-				-0.4
3,278,313	+				-0.6
3,278,314	-				+1.5
3,278,314	-				-1.8
3,278,357	-				+1.3
3,278,372	+				+0.2
3,278,374	+				-1.1
3,278,374	+				-0.9
3,278,374	+				-0.6
3,278,375	-				-1.6
3,278,375	-				-0.7
3,278,392	-				-1.0
3,278,392	-				-0.4
3,278,396	+				+0.7
3,278,397	-				-2.5
3,278,397	-				-1.0
3,278,397	-				-2.3
3,278,397	-				-1.0
3,278,412	+				+0.9
3,278,412	+				-0.0
3,278,412	+				+1.2
3,278,412	+				-0.9
3,278,412	+				-0.9
3,278,412	+				+0.7
3,278,412	+				+0.2
3,278,412	+				-2.3
3,278,412	+				-1.2
3,278,412	+				-0.0
3,278,412	+				-1.9
3,278,413	-				-2.3
3,278,413	-				-0.3
3,278,413	-				-2.3
3,278,413	-				-0.0
3,278,413	-				-1.9
3,278,413	-				-0.2
3,278,413	-				-1.3
3,278,413	-				-0.8
3,278,414	+				-1.1
3,278,414	+				-0.2
3,278,414	+				+1.6
3,278,414	+				-1.3
3,278,415	-				-2.2
3,278,415	-				-1.6
3,278,415	-				-1.7
3,278,415	-				-1.7
3,278,432	+				+0.3
3,278,433	-				-2.1
3,278,441	+				-2.4
3,278,441	+				-0.2
3,278,441	+				-1.3
3,278,441	+				+1.0
3,278,442	-				-1.4
3,278,442	-				-2.2
3,278,442	-				-2.3
3,278,442	-				-2.0
3,278,442	-				-0.6
3,278,442	-				-2.5
3,278,446	+				-0.2
3,278,446	+				-1.0
3,278,446	+				-0.3
3,278,446	+				-1.5
3,278,446	+				-3.1
3,278,447	-				-1.6
3,278,447	-				-1.5
3,278,447	-				-1.5
3,278,447	-				-0.5
3,278,453	+				-0.0
3,278,454	-				-0.2
3,278,454	-				-2.3
3,278,454	-				-1.6
3,278,465	+				-3.3
3,278,466	-				-0.7
3,278,466	-				-1.4
3,278,469	-				-0.6
3,278,484	-				-2.2
3,278,484	-				-1.2
3,278,500	+				-1.4
3,278,501	-				-0.3
3,278,501	-				-0.6
3,278,501	-				-0.8
3,278,558	+		Sama_2743	0.12	-0.9
3,278,558	+		Sama_2743	0.12	-2.3
3,278,558	+		Sama_2743	0.12	-0.2
3,278,559	-		Sama_2743	0.12	-0.3
3,278,559	-		Sama_2743	0.12	-0.7
3,278,611	-		Sama_2743	0.16	-1.6
3,278,621	+		Sama_2743	0.17	-0.0
3,278,622	-		Sama_2743	0.17	-0.2
3,278,633	+		Sama_2743	0.18	-2.7
3,278,633	+		Sama_2743	0.18	-1.6
3,278,633	+		Sama_2743	0.18	-0.3
3,278,677	+		Sama_2743	0.21	-1.5
3,278,678	-		Sama_2743	0.21	+0.2
3,278,678	-		Sama_2743	0.21	-2.5
3,278,678	-		Sama_2743	0.21	+0.8
3,278,678	-		Sama_2743	0.21	-2.7
3,278,678	-		Sama_2743	0.21	-3.3
3,278,678	-		Sama_2743	0.21	-1.2
3,278,748	+		Sama_2743	0.27	-1.3
3,278,748	+		Sama_2743	0.27	-1.9
3,278,749	-		Sama_2743	0.27	-0.3
3,278,853	+		Sama_2743	0.36	-1.6
3,278,854	-		Sama_2743	0.36	-2.7
3,278,888	+		Sama_2743	0.39	-1.8
3,278,889	-		Sama_2743	0.39	-1.8
3,278,925	+		Sama_2743	0.42	-1.2
3,278,926	-		Sama_2743	0.42	-2.8
3,278,926	-		Sama_2743	0.42	-1.3
3,278,926	-		Sama_2743	0.42	-0.6
3,278,926	-		Sama_2743	0.42	-1.7
3,278,958	-		Sama_2743	0.44	-1.7
3,278,998	+		Sama_2743	0.48	-1.9
3,278,999	-		Sama_2743	0.48	-1.8
3,278,999	-		Sama_2743	0.48	-2.8
3,278,999	-		Sama_2743	0.48	-1.3
3,279,030	+		Sama_2743	0.50	-2.1
3,279,030	+		Sama_2743	0.50	-2.9
3,279,030	+		Sama_2743	0.50	-1.3
3,279,030	+		Sama_2743	0.50	-2.0
3,279,031	-		Sama_2743	0.50	-1.6
3,279,031	-		Sama_2743	0.50	-0.7
3,279,031	-		Sama_2743	0.50	-1.3
3,279,031	-		Sama_2743	0.50	-0.0
3,279,031	-		Sama_2743	0.50	-3.3
3,279,061	+		Sama_2743	0.53	-1.7
3,279,061	+		Sama_2743	0.53	-1.5
3,279,061	+		Sama_2743	0.53	-1.5
3,279,061	+		Sama_2743	0.53	-1.8
3,279,061	+		Sama_2743	0.53	-1.4
3,279,061	+		Sama_2743	0.53	-2.1
3,279,062	-		Sama_2743	0.53	-2.3
3,279,062	-		Sama_2743	0.53	-0.5
3,279,062	-		Sama_2743	0.53	-2.3
3,279,062	-		Sama_2743	0.53	-1.2
3,279,062	-		Sama_2743	0.53	-1.1
3,279,062	-		Sama_2743	0.53	-1.3
3,279,063	+		Sama_2743	0.53	-0.5
3,279,063	+		Sama_2743	0.53	-1.7
3,279,063	+		Sama_2743	0.53	-2.9
3,279,063	+		Sama_2743	0.53	-2.8
3,279,063	+		Sama_2743	0.53	-1.0
3,279,063	+		Sama_2743	0.53	-1.8
3,279,063	+		Sama_2743	0.53	-2.2
3,279,063	+		Sama_2743	0.53	-1.3
3,279,063	+		Sama_2743	0.53	-1.1
3,279,063	+		Sama_2743	0.53	-1.3
3,279,063	+		Sama_2743	0.53	-1.2
3,279,063	+		Sama_2743	0.53	-0.3
3,279,064	-		Sama_2743	0.53	-1.6
3,279,064	-		Sama_2743	0.53	-2.6
3,279,118	-		Sama_2743	0.57	-0.4
3,279,118	-		Sama_2743	0.57	-1.4
3,279,130	+		Sama_2743	0.58	-1.7
3,279,187	+		Sama_2743	0.63	-2.5
3,279,188	-		Sama_2743	0.63	-3.0
3,279,202	+		Sama_2743	0.64	-1.9
3,279,202	+		Sama_2743	0.64	-2.6
3,279,202	+		Sama_2743	0.64	-2.3
3,279,202	+		Sama_2743	0.64	-1.8
3,279,203	-		Sama_2743	0.64	-2.1
3,279,203	-		Sama_2743	0.64	-1.6
3,279,203	-		Sama_2743	0.64	-1.6
3,279,203	-		Sama_2743	0.64	-1.3
3,279,203	-		Sama_2743	0.64	-1.3
3,279,203	-		Sama_2743	0.64	-1.6
3,279,234	-		Sama_2743	0.67	-1.7
3,279,246	+		Sama_2743	0.68	-0.6
3,279,246	+		Sama_2743	0.68	-2.3
3,279,247	-		Sama_2743	0.68	-2.1
3,279,247	-		Sama_2743	0.68	-1.4
3,279,247	-		Sama_2743	0.68	-0.6
3,279,247	-		Sama_2743	0.68	-1.8
3,279,273	+		Sama_2743	0.70	-0.6
3,279,273	+		Sama_2743	0.70	-0.6
3,279,274	-		Sama_2743	0.70	-3.1
3,279,274	-		Sama_2743	0.70	-2.0
3,279,287	+		Sama_2743	0.71	-1.9
3,279,288	-		Sama_2743	0.71	-2.3
3,279,288	-		Sama_2743	0.71	+0.2
3,279,288	-		Sama_2743	0.71	-1.8
3,279,288	-		Sama_2743	0.71	-2.6
3,279,315	+		Sama_2743	0.73	-0.3
3,279,315	+		Sama_2743	0.73	-1.5
3,279,315	+		Sama_2743	0.73	-1.4
3,279,315	+		Sama_2743	0.73	-2.9
3,279,316	-		Sama_2743	0.73	-1.8
3,279,316	-		Sama_2743	0.73	-0.3
3,279,316	-		Sama_2743	0.73	-1.3
3,279,316	-		Sama_2743	0.73	-3.1
3,279,316	-		Sama_2743	0.73	-0.0
3,279,316	-		Sama_2743	0.73	-3.2
3,279,316	-		Sama_2743	0.73	-1.9
3,279,316	-		Sama_2743	0.73	-0.5
3,279,316	-		Sama_2743	0.73	+0.6
3,279,320	+		Sama_2743	0.74	-2.0
3,279,321	-		Sama_2743	0.74	-0.0
3,279,321	-		Sama_2743	0.74	-0.8
3,279,321	-		Sama_2743	0.74	-1.5
3,279,362	+		Sama_2743	0.77	-0.0
3,279,364	+		Sama_2743	0.77	-2.0
3,279,364	+		Sama_2743	0.77	-1.9
3,279,364	+		Sama_2743	0.77	-3.0
3,279,365	-		Sama_2743	0.77	-2.5
3,279,365	-		Sama_2743	0.77	+0.7
3,279,471	+		Sama_2743	0.86	-0.7
3,279,471	+		Sama_2743	0.86	-1.8
3,279,471	+		Sama_2743	0.86	-1.0
3,279,471	+		Sama_2743	0.86	-0.2
3,279,471	+		Sama_2743	0.86	-0.0
3,279,471	+		Sama_2743	0.86	-0.7
3,279,471	+		Sama_2743	0.86	-2.4
3,279,472	-		Sama_2743	0.86	-0.2
3,279,472	-		Sama_2743	0.86	-1.3
3,279,477	+		Sama_2743	0.87	-1.2
3,279,478	-		Sama_2743	0.87	-0.3
3,279,478	-		Sama_2743	0.87	+0.5
3,279,478	-		Sama_2743	0.87	-1.7
3,279,635	+				-2.3
3,279,639	+				-2.1
3,279,639	+				-3.0
3,279,639	+				+1.0
3,279,639	+				-1.2
3,279,640	-				-1.2
3,279,640	-				-2.6
3,279,640	-				-0.7
3,279,640	-				-0.4
3,279,640	-				-1.2
3,279,640	-				-2.5
3,279,658	+				-0.7
3,279,658	+				-1.3
3,279,658	+				-2.3
3,279,658	+				-0.9
3,279,659	-				-0.2
3,279,660	+				-1.3
3,279,660	+				-1.0
3,279,660	+				+0.1
3,279,660	+				+1.0
3,279,660	+				-2.3
3,279,660	+				+0.1
3,279,661	-				+0.3
3,279,661	-				-1.3
3,279,661	-				-1.5
3,279,730	-				-0.6
3,279,749	-				-1.6
3,279,923	-				+1.0
3,280,034	+		Sama_2744	0.12	+0.4
3,280,042	-		Sama_2744	0.13	-3.9
3,280,059	+		Sama_2744	0.13	-0.3
3,280,059	+		Sama_2744	0.13	-0.4
3,280,060	-		Sama_2744	0.13	+0.7
3,280,076	+		Sama_2744	0.14	-1.8
3,280,076	+		Sama_2744	0.14	-1.7
3,280,076	+		Sama_2744	0.14	+0.7
3,280,084	+		Sama_2744	0.14	-2.5
3,280,085	-		Sama_2744	0.14	-0.5
3,280,121	-		Sama_2744	0.15	-0.8
3,280,185	-		Sama_2744	0.17	-1.3
3,280,226	+		Sama_2744	0.18	-1.8
3,280,226	+		Sama_2744	0.18	-3.6
3,280,316	-		Sama_2744	0.21	-0.8
3,280,327	+		Sama_2744	0.21	-1.6
3,280,344	-		Sama_2744	0.22	-0.0
3,280,368	+		Sama_2744	0.23	-0.6
3,280,369	-		Sama_2744	0.23	-2.2
3,280,369	-		Sama_2744	0.23	-2.5
3,280,369	-		Sama_2744	0.23	+0.2
3,280,369	-		Sama_2744	0.23	-0.8
3,280,369	-		Sama_2744	0.23	-1.0
3,280,369	-		Sama_2744	0.23	-3.0
3,280,454	+		Sama_2744	0.25	-1.5
3,280,454	+		Sama_2744	0.25	-1.5
3,280,454	+		Sama_2744	0.25	-0.3
3,280,455	-		Sama_2744	0.25	-1.1
3,280,455	-		Sama_2744	0.25	-2.2
3,280,455	-		Sama_2744	0.25	-1.5
3,280,485	+		Sama_2744	0.26	-1.7
3,280,485	+		Sama_2744	0.26	-2.9
3,280,486	-		Sama_2744	0.26	-2.7
3,280,547	+		Sama_2744	0.28	-1.5
3,280,616	+		Sama_2744	0.30	-0.9
3,280,616	+		Sama_2744	0.30	-1.2
3,280,617	-		Sama_2744	0.30	-2.4
3,280,617	-		Sama_2744	0.30	-0.0
3,280,617	-		Sama_2744	0.30	-1.6
3,280,617	-		Sama_2744	0.30	-1.0
3,280,617	-		Sama_2744	0.30	-2.1
3,280,636	+		Sama_2744	0.31	-2.0
3,280,637	-		Sama_2744	0.31	-2.5
3,280,637	-		Sama_2744	0.31	-0.8
3,280,637	-		Sama_2744	0.31	-0.4