Strain Fitness in Shewanella amazonensis SB2B around Sama_1904

Experiment: Bacitracin 0.125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bacitracin 0.125 mg/ml
2,328,758	+				+0.3
2,328,762	+				+1.0
2,328,790	+				+0.3
2,328,839	+				-1.2
2,328,850	-				-0.7
2,328,851	+				-0.0
2,328,955	+				-1.3
2,329,061	-				-1.1
2,329,061	-				+0.1
2,329,061	-				-0.1
2,329,101	-				+0.3
2,329,101	-				+0.1
2,329,101	-				+0.1
2,329,184	-		Sama_1904	0.11	+0.4
2,329,192	+		Sama_1904	0.11	-0.3
2,329,193	-		Sama_1904	0.11	-0.1
2,329,193	-		Sama_1904	0.11	+0.4
2,329,242	-		Sama_1904	0.14	-2.6
2,329,263	+		Sama_1904	0.15	-0.3
2,329,281	+		Sama_1904	0.16	-1.5
2,329,282	-		Sama_1904	0.16	-0.4
2,329,282	-		Sama_1904	0.16	+1.1
2,329,338	+		Sama_1904	0.19	+0.7
2,329,339	-		Sama_1904	0.20	+0.2
2,329,339	-		Sama_1904	0.20	+2.0
2,329,422	+		Sama_1904	0.24	-1.9
2,329,435	+		Sama_1904	0.25	-0.3
2,329,509	-		Sama_1904	0.29	-1.5
2,329,518	+		Sama_1904	0.30	-0.0
2,329,519	-		Sama_1904	0.30	+0.3
2,329,582	-		Sama_1904	0.34	+0.8
2,329,603	+		Sama_1904	0.35	+0.4
2,329,717	-		Sama_1904	0.41	-0.9
2,329,795	+		Sama_1904	0.46	+0.4
2,329,809	+		Sama_1904	0.47	-1.5
2,329,887	+		Sama_1904	0.51	+0.5
2,329,888	-		Sama_1904	0.51	+0.4
2,329,948	-		Sama_1904	0.55	+0.4
2,329,981	+		Sama_1904	0.57	+0.1
2,330,084	+		Sama_1904	0.63	+0.1
2,330,084	+		Sama_1904	0.63	+2.3
2,330,084	+		Sama_1904	0.63	+0.1
2,330,085	-		Sama_1904	0.63	+1.4
2,330,246	+		Sama_1904	0.72	-0.4
2,330,246	+		Sama_1904	0.72	-0.4
2,330,246	+		Sama_1904	0.72	-0.4
2,330,246	+		Sama_1904	0.72	-0.7
2,330,246	+		Sama_1904	0.72	+0.1
2,330,247	-		Sama_1904	0.72	-0.5
2,330,247	-		Sama_1904	0.72	+0.1
2,330,312	+		Sama_1904	0.76	-1.6
2,330,368	+		Sama_1904	0.79	+0.7
2,330,372	+		Sama_1904	0.80	-1.1
2,330,372	+		Sama_1904	0.80	+0.7
2,330,372	+		Sama_1904	0.80	-1.3
2,330,372	+		Sama_1904	0.80	-1.3
2,330,372	+		Sama_1904	0.80	-0.7
2,330,373	-		Sama_1904	0.80	+0.7
2,330,373	-		Sama_1904	0.80	-0.6
2,330,373	-		Sama_1904	0.80	+0.5
2,330,425	+		Sama_1904	0.83	-0.5
2,330,454	+		Sama_1904	0.84	+0.1
2,330,502	+		Sama_1904	0.87	+0.5
2,330,503	-		Sama_1904	0.87	+0.7
2,330,506	+		Sama_1904	0.87	+1.4
2,330,617	+				+0.4
2,330,618	-				-0.1
2,330,618	-				+1.2
2,330,638	+				-0.5
2,330,638	+				+0.2
2,330,692	+				+0.7
2,330,736	+				-1.9
2,330,901	+				-1.0
2,330,902	-				-1.6
2,330,926	+				-1.1
2,331,055	+				-1.6
2,331,056	-				-3.4
2,331,056	-				-2.1
2,331,148	+		Sama_1905	0.11	-1.5
2,331,182	-		Sama_1905	0.12	-0.5
2,331,182	-		Sama_1905	0.12	-1.0
2,331,189	-		Sama_1905	0.12	-1.4
2,331,203	-		Sama_1905	0.12	-1.1
2,331,266	-		Sama_1905	0.14	-0.9
2,331,272	-		Sama_1905	0.15	-0.0
2,331,289	+		Sama_1905	0.15	-2.2
2,331,290	-		Sama_1905	0.15	-1.7
2,331,290	-		Sama_1905	0.15	-1.6
2,331,290	-		Sama_1905	0.15	-0.2
2,331,290	-		Sama_1905	0.15	-0.3
2,331,290	-		Sama_1905	0.15	-3.1
2,331,291	+		Sama_1905	0.15	-0.3
2,331,291	+		Sama_1905	0.15	-1.0
2,331,292	-		Sama_1905	0.15	-0.6
2,331,292	-		Sama_1905	0.15	-3.3
2,331,292	-		Sama_1905	0.15	-0.7
2,331,292	-		Sama_1905	0.15	-0.9
2,331,292	-		Sama_1905	0.15	-1.8
2,331,292	-		Sama_1905	0.15	-0.1
2,331,292	-		Sama_1905	0.15	-1.7
2,331,324	-		Sama_1905	0.16	-1.8
2,331,324	-		Sama_1905	0.16	-1.5
2,331,355	-		Sama_1905	0.17	-2.2
2,331,355	-		Sama_1905	0.17	+0.1
2,331,355	-		Sama_1905	0.17	-1.3
2,331,355	-		Sama_1905	0.17	-1.1
2,331,378	+		Sama_1905	0.18	-1.8
2,331,426	+		Sama_1905	0.20	-2.6
2,331,427	-		Sama_1905	0.20	-1.9
2,331,435	-		Sama_1905	0.20	-0.3
2,331,473	-		Sama_1905	0.21	+0.7
2,331,473	-		Sama_1905	0.21	-0.1
2,331,473	-		Sama_1905	0.21	-2.4
2,331,473	-		Sama_1905	0.21	-1.3
2,331,474	+		Sama_1905	0.21	-2.1
2,331,475	-		Sama_1905	0.21	-1.3
2,331,558	-		Sama_1905	0.24	-2.2
2,331,558	-		Sama_1905	0.24	-0.9
2,331,584	+		Sama_1905	0.25	-1.4
2,331,612	+		Sama_1905	0.26	-3.6
2,331,612	+		Sama_1905	0.26	-1.5
2,331,612	+		Sama_1905	0.26	+0.7
2,331,612	+		Sama_1905	0.26	-0.9
2,331,612	+		Sama_1905	0.26	-1.5
2,331,613	-		Sama_1905	0.26	-1.2
2,331,613	-		Sama_1905	0.26	-0.9
2,331,676	-		Sama_1905	0.28	-1.6
2,331,676	-		Sama_1905	0.28	-0.9
2,331,676	-		Sama_1905	0.28	-3.4
2,331,676	-		Sama_1905	0.28	-3.2
2,331,676	-		Sama_1905	0.28	+0.7
2,331,676	-		Sama_1905	0.28	-0.8
2,331,676	-		Sama_1905	0.28	-1.2
2,331,695	-		Sama_1905	0.28	-1.2