Strain Fitness in Shewanella amazonensis SB2B around Sama_1547

Experiment: Bacitracin 0.125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bacitracin 0.125 mg/ml
1,882,292	+		Sama_1545	0.81	+1.0
1,882,338	+		Sama_1545	0.84	+0.7
1,882,434	+				-0.5
1,882,435	-				-1.6
1,882,446	-				-0.0
1,882,492	+				-0.1
1,882,603	+				-0.8
1,882,720	+				-0.6
1,882,720	+				+1.7
1,882,721	-				+1.0
1,883,068	-				+2.7
1,883,091	+				+0.5
1,883,102	-				+0.2
1,883,122	-				+0.9
1,883,135	+				-0.6
1,883,194	-				+1.9
1,883,213	-				+0.5
1,883,279	+		Sama_1547	0.11	-1.6
1,883,279	+		Sama_1547	0.11	-0.3
1,883,280	-		Sama_1547	0.11	+0.4
1,883,280	-		Sama_1547	0.11	+0.7
1,883,309	+		Sama_1547	0.15	-0.1
1,883,351	+		Sama_1547	0.20	+0.1
1,883,352	-		Sama_1547	0.20	-0.9
1,883,352	-		Sama_1547	0.20	-0.1
1,883,352	-		Sama_1547	0.20	-2.1
1,883,356	+		Sama_1547	0.21	-1.3
1,883,518	+		Sama_1547	0.41	-0.3
1,883,518	+		Sama_1547	0.41	+0.1
1,883,519	-		Sama_1547	0.41	-0.1
1,883,519	-		Sama_1547	0.41	-0.0
1,883,519	-		Sama_1547	0.41	-0.2
1,883,519	-		Sama_1547	0.41	-0.8
1,883,519	-		Sama_1547	0.41	+1.1
1,883,543	+		Sama_1547	0.44	-0.2
1,883,544	-		Sama_1547	0.45	+1.7
1,883,544	-		Sama_1547	0.45	+0.3
1,883,544	-		Sama_1547	0.45	+1.7
1,883,671	+		Sama_1547	0.61	-1.6
1,883,671	+		Sama_1547	0.61	-0.9
1,883,756	+		Sama_1547	0.71	-0.0
1,883,756	+		Sama_1547	0.71	-0.1
1,883,756	+		Sama_1547	0.71	+0.6
1,883,804	-		Sama_1547	0.78	-0.6
1,883,840	+		Sama_1547	0.82	-0.5
1,883,840	+		Sama_1547	0.82	-1.1
1,883,841	-		Sama_1547	0.82	+0.2
1,883,930	-				+1.1
1,884,100	-				-0.3
1,884,136	-				-0.2
1,884,167	+				+0.7
1,884,168	-				-0.5
1,884,222	+				+1.2
1,884,266	+				+1.3
1,884,266	+				-2.2
1,884,266	+				-0.4
1,884,267	-				+0.1
1,884,267	-				+0.2
1,884,295	+				-0.0
1,884,295	+				-0.3
1,884,296	-				-0.3
1,884,304	+				+0.2
1,884,304	+				+0.8
1,884,304	+				-1.7
1,884,304	+				+1.0
1,884,305	-				-0.2
1,884,305	-				-0.3
1,884,305	-				+0.3
1,884,319	+				+1.1
1,884,340	+				-0.3
1,884,340	+				+0.7
1,884,340	+				-1.1
1,884,340	+				-0.4
1,884,341	-				-0.4
1,884,344	+				-0.9
1,884,350	+				-1.2
1,884,368	+				-0.3
1,884,369	-				+0.9
1,884,369	-				-0.7
1,884,369	-				-0.3
1,884,392	+				+0.2
1,884,392	+				+1.0
1,884,476	+				+0.6
1,884,476	+				+0.0
1,884,476	+				-0.4
1,884,476	+				+0.6
1,884,477	-				-0.1
1,884,477	-				+0.5
1,884,778	+		Sama_1548	0.30	+0.3
1,884,857	+		Sama_1548	0.35	-0.7
1,884,857	+		Sama_1548	0.35	-0.3
1,884,857	+		Sama_1548	0.35	-2.0
1,884,857	+		Sama_1548	0.35	+0.2
1,884,858	-		Sama_1548	0.35	-0.5
1,884,858	-		Sama_1548	0.35	-0.6
1,884,858	-		Sama_1548	0.35	-0.7
1,884,858	-		Sama_1548	0.35	+0.9
1,884,912	+		Sama_1548	0.38	-3.0
1,884,912	+		Sama_1548	0.38	-0.1
1,884,913	-		Sama_1548	0.38	+0.1
1,884,913	-		Sama_1548	0.38	+0.1
1,884,913	-		Sama_1548	0.38	-1.3