Strain Fitness in Shewanella amazonensis SB2B around Sama_0825
Experiment: Bacitracin 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Bacitracin 0.125 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,010,618 | - | -1.2 | |||
1,010,618 | - | -2.5 | |||
1,010,713 | - | Sama_0825 | 0.18 | -1.8 | |
1,010,718 | - | Sama_0825 | 0.20 | -1.6 | |
1,010,746 | - | Sama_0825 | 0.26 | -1.8 | |
1,011,429 | + | -0.5 | |||
1,011,464 | + | -0.2 | |||
1,011,472 | + | -1.2 | |||
1,011,472 | + | -0.8 | |||
1,011,472 | + | +0.6 | |||
1,011,472 | + | -0.2 | |||
1,011,472 | + | -0.4 | |||
1,011,472 | + | -1.0 | |||
1,011,472 | + | -0.9 | |||
1,011,472 | + | -0.8 | |||
1,011,475 | + | -0.8 | |||
1,011,475 | + | -0.8 | |||
1,011,475 | + | -0.9 | |||
1,011,478 | + | -0.7 | |||
1,011,478 | + | -0.6 | |||
1,011,483 | + | -2.8 | |||
1,011,483 | + | -0.5 | |||
1,011,484 | - | +1.0 |
Or see this region's nucleotide sequence