Experiment: m.b. 1-ethyl-3-methylimidazolium chloride 7.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_498 and HP15_499 are separated by 138 nucleotides HP15_499 and HP15_500 are separated by 110 nucleotides HP15_500 and HP15_501 are separated by 33 nucleotides HP15_501 and HP15_502 are separated by 59 nucleotides
HP15_498: HP15_498 - thiolase-like protein, at 511,896 to 512,099
_498
HP15_499: HP15_499 - hypothetical protein, at 512,238 to 512,348
_499
HP15_500: HP15_500 - conserved hypothetical protein, at 512,459 to 513,064
_500
HP15_501: HP15_501 - acyltransferase, WS/DGAT/MGAT, at 513,098 to 514,684
_501
HP15_502: HP15_502 - transcriptional regulator, LysR family protein, at 514,744 to 515,655
_502
Position (kb) 513
514
515 Strain fitness (log2 ratio) -2
-1
0
1 at 512.113 kb on - strand at 512.376 kb on + strand at 512.455 kb on - strand at 512.551 kb on + strand, within HP15_500 at 512.551 kb on - strand, within HP15_500 at 512.635 kb on - strand, within HP15_500 at 512.785 kb on - strand, within HP15_500 at 512.985 kb on + strand, within HP15_500 at 512.985 kb on + strand, within HP15_500 at 513.003 kb on - strand, within HP15_500 at 513.073 kb on - strand at 513.167 kb on + strand at 513.167 kb on + strand at 513.172 kb on + strand at 513.180 kb on - strand at 513.218 kb on - strand at 513.363 kb on + strand, within HP15_501 at 513.363 kb on - strand, within HP15_501 at 513.400 kb on + strand, within HP15_501 at 513.400 kb on + strand, within HP15_501 at 513.433 kb on - strand, within HP15_501 at 513.479 kb on - strand, within HP15_501 at 513.525 kb on - strand, within HP15_501 at 513.528 kb on + strand, within HP15_501 at 513.528 kb on + strand, within HP15_501 at 513.581 kb on + strand, within HP15_501 at 513.586 kb on + strand, within HP15_501 at 513.588 kb on - strand, within HP15_501 at 513.802 kb on - strand, within HP15_501 at 514.060 kb on - strand, within HP15_501 at 514.300 kb on - strand, within HP15_501 at 514.347 kb on - strand, within HP15_501 at 514.791 kb on - strand at 514.808 kb on + strand at 514.816 kb on - strand at 514.816 kb on - strand at 514.816 kb on - strand at 514.816 kb on - strand at 514.979 kb on - strand, within HP15_502 at 515.212 kb on + strand, within HP15_502 at 515.358 kb on - strand, within HP15_502 at 515.375 kb on + strand, within HP15_502 at 515.383 kb on - strand, within HP15_502 at 515.433 kb on + strand, within HP15_502 at 515.473 kb on - strand, within HP15_502 at 515.540 kb on + strand, within HP15_502 at 515.548 kb on - strand, within HP15_502 at 515.631 kb on + strand at 515.639 kb on - strand at 515.639 kb on - strand at 515.678 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. 1-ethyl-3-methylimidazolium chloride 7.5 mM remove 512,113 - -0.7 512,376 + -0.0 512,455 - +0.3 512,551 + HP15_500 0.15 -0.3 512,551 - HP15_500 0.15 -0.1 512,635 - HP15_500 0.29 +1.0 512,785 - HP15_500 0.54 -0.3 512,985 + HP15_500 0.87 +0.6 512,985 + HP15_500 0.87 +0.3 513,003 - HP15_500 0.90 -0.8 513,073 - +1.3 513,167 + +0.6 513,167 + +0.3 513,172 + +0.2 513,180 - -0.2 513,218 - -1.8 513,363 + HP15_501 0.17 +0.6 513,363 - HP15_501 0.17 +1.2 513,400 + HP15_501 0.19 +0.9 513,400 + HP15_501 0.19 -0.1 513,433 - HP15_501 0.21 -0.2 513,479 - HP15_501 0.24 +0.8 513,525 - HP15_501 0.27 +0.3 513,528 + HP15_501 0.27 +0.0 513,528 + HP15_501 0.27 +1.5 513,581 + HP15_501 0.30 +0.2 513,586 + HP15_501 0.31 +0.2 513,588 - HP15_501 0.31 -1.5 513,802 - HP15_501 0.44 +0.4 514,060 - HP15_501 0.61 +0.0 514,300 - HP15_501 0.76 +0.7 514,347 - HP15_501 0.79 -0.1 514,791 - +0.3 514,808 + +0.1 514,816 - -2.0 514,816 - -2.1 514,816 - +1.3 514,816 - +0.3 514,979 - HP15_502 0.26 +0.4 515,212 + HP15_502 0.51 +0.6 515,358 - HP15_502 0.67 +0.5 515,375 + HP15_502 0.69 -1.0 515,383 - HP15_502 0.70 -1.6 515,433 + HP15_502 0.76 -0.1 515,473 - HP15_502 0.80 +0.6 515,540 + HP15_502 0.87 +0.3 515,548 - HP15_502 0.88 -1.7 515,631 + -1.3 515,639 - -0.5 515,639 - +0.5 515,678 + +0.2
Or see this region's nucleotide sequence