Experiment: m.b. 1-ethyl-3-methylimidazolium chloride 7.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_1148 and HP15_1149 are separated by 57 nucleotides HP15_1149 and HP15_1150 are separated by 34 nucleotides
HP15_1148: HP15_1148 - alpha amylase, catalytic region, at 1,182,134 to 1,183,873
_1148
HP15_1149: HP15_1149 - quinone oxidoreductase putative, PIG3, at 1,183,931 to 1,184,923
_1149
HP15_1150: HP15_1150 - oxidoreductase, zinc-binding dehydrogenase family, at 1,184,958 to 1,185,983
_1150
Position (kb)
1183
1184
1185 Strain fitness (log2 ratio)
-1
0
1
2 at 1183.081 kb on + strand, within HP15_1148 at 1183.150 kb on + strand, within HP15_1148 at 1183.298 kb on + strand, within HP15_1148 at 1183.385 kb on - strand, within HP15_1148 at 1183.422 kb on + strand, within HP15_1148 at 1183.485 kb on + strand, within HP15_1148 at 1183.532 kb on + strand, within HP15_1148 at 1183.537 kb on - strand, within HP15_1148 at 1183.546 kb on + strand, within HP15_1148 at 1183.578 kb on + strand, within HP15_1148 at 1183.629 kb on + strand, within HP15_1148 at 1183.758 kb on + strand at 1183.821 kb on + strand at 1183.821 kb on + strand at 1183.829 kb on - strand at 1183.830 kb on - strand at 1183.847 kb on - strand at 1183.956 kb on - strand at 1184.068 kb on - strand, within HP15_1149 at 1184.068 kb on - strand, within HP15_1149 at 1184.154 kb on - strand, within HP15_1149 at 1184.174 kb on - strand, within HP15_1149 at 1184.182 kb on + strand, within HP15_1149 at 1184.552 kb on + strand, within HP15_1149 at 1184.570 kb on - strand, within HP15_1149 at 1184.592 kb on - strand, within HP15_1149 at 1184.642 kb on - strand, within HP15_1149 at 1184.793 kb on - strand, within HP15_1149 at 1184.793 kb on - strand, within HP15_1149 at 1184.851 kb on + strand at 1184.922 kb on + strand at 1184.932 kb on + strand at 1184.940 kb on - strand at 1184.940 kb on - strand at 1184.941 kb on + strand at 1185.041 kb on - strand at 1185.425 kb on + strand, within HP15_1150 at 1185.493 kb on - strand, within HP15_1150 at 1185.499 kb on + strand, within HP15_1150 at 1185.501 kb on + strand, within HP15_1150 at 1185.579 kb on - strand, within HP15_1150 at 1185.614 kb on - strand, within HP15_1150 at 1185.670 kb on + strand, within HP15_1150 at 1185.691 kb on + strand, within HP15_1150 at 1185.724 kb on - strand, within HP15_1150 at 1185.749 kb on + strand, within HP15_1150 at 1185.842 kb on + strand, within HP15_1150
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. 1-ethyl-3-methylimidazolium chloride 7.5 mM remove 1,183,081 + HP15_1148 0.54 +0.2 1,183,150 + HP15_1148 0.58 -1.4 1,183,298 + HP15_1148 0.67 -0.8 1,183,385 - HP15_1148 0.72 +0.2 1,183,422 + HP15_1148 0.74 -0.2 1,183,485 + HP15_1148 0.78 +0.1 1,183,532 + HP15_1148 0.80 +0.4 1,183,537 - HP15_1148 0.81 -1.1 1,183,546 + HP15_1148 0.81 +0.3 1,183,578 + HP15_1148 0.83 -1.0 1,183,629 + HP15_1148 0.86 +0.5 1,183,758 + +0.0 1,183,821 + -0.4 1,183,821 + +0.3 1,183,829 - -0.7 1,183,830 - +0.1 1,183,847 - +2.0 1,183,956 - +0.1 1,184,068 - HP15_1149 0.14 +1.8 1,184,068 - HP15_1149 0.14 +0.4 1,184,154 - HP15_1149 0.22 +0.5 1,184,174 - HP15_1149 0.24 +0.2 1,184,182 + HP15_1149 0.25 +1.2 1,184,552 + HP15_1149 0.63 -1.5 1,184,570 - HP15_1149 0.64 +0.1 1,184,592 - HP15_1149 0.67 +0.8 1,184,642 - HP15_1149 0.72 +0.4 1,184,793 - HP15_1149 0.87 +0.6 1,184,793 - HP15_1149 0.87 -0.6 1,184,851 + -0.4 1,184,922 + -0.3 1,184,932 + -0.6 1,184,940 - -0.2 1,184,940 - -0.1 1,184,941 + +0.1 1,185,041 - -1.5 1,185,425 + HP15_1150 0.46 -0.0 1,185,493 - HP15_1150 0.52 -1.2 1,185,499 + HP15_1150 0.53 +0.6 1,185,501 + HP15_1150 0.53 +0.6 1,185,579 - HP15_1150 0.61 -0.5 1,185,614 - HP15_1150 0.64 +0.2 1,185,670 + HP15_1150 0.69 +0.9 1,185,691 + HP15_1150 0.71 -0.6 1,185,724 - HP15_1150 0.75 -0.3 1,185,749 + HP15_1150 0.77 -0.4 1,185,842 + HP15_1150 0.86 +0.5
Or see this region's nucleotide sequence