Experiment: m.b. 1-ethyl-3-methylimidazolium acetate 15 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_746 and HP15_747 are separated by 165 nucleotides HP15_747 and HP15_748 are separated by 257 nucleotides
HP15_746: HP15_746 - two component transcriptional regulator, winged helix family, at 754,504 to 755,241
_746
HP15_747: HP15_747 - integral membrane sensor signal transduction histidine kinase, at 755,407 to 756,882
_747
HP15_748: HP15_748 - glycerol kinase, at 757,140 to 758,621
_748
Position (kb) 755
756
757 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 754.511 kb on + strand at 754.610 kb on + strand, within HP15_746 at 755.008 kb on + strand, within HP15_746 at 755.016 kb on - strand, within HP15_746 at 755.016 kb on - strand, within HP15_746 at 755.124 kb on - strand, within HP15_746 at 755.137 kb on - strand, within HP15_746 at 755.193 kb on + strand at 755.193 kb on + strand at 755.215 kb on + strand at 755.298 kb on + strand at 755.792 kb on + strand, within HP15_747 at 755.925 kb on - strand, within HP15_747 at 756.243 kb on - strand, within HP15_747 at 756.314 kb on + strand, within HP15_747 at 756.317 kb on - strand, within HP15_747 at 756.342 kb on - strand, within HP15_747 at 756.509 kb on + strand, within HP15_747 at 756.851 kb on - strand at 756.872 kb on + strand at 756.877 kb on + strand at 756.891 kb on + strand at 756.896 kb on + strand at 756.954 kb on + strand at 756.959 kb on + strand at 756.962 kb on - strand at 757.169 kb on + strand at 757.336 kb on - strand, within HP15_748 at 757.406 kb on - strand, within HP15_748 at 757.683 kb on - strand, within HP15_748 at 757.727 kb on + strand, within HP15_748 at 757.735 kb on - strand, within HP15_748 at 757.803 kb on + strand, within HP15_748 at 757.803 kb on + strand, within HP15_748
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. 1-ethyl-3-methylimidazolium acetate 15 mM remove 754,511 + -1.3 754,610 + HP15_746 0.14 -1.1 755,008 + HP15_746 0.68 -1.5 755,016 - HP15_746 0.69 -3.8 755,016 - HP15_746 0.69 -2.1 755,124 - HP15_746 0.84 -1.1 755,137 - HP15_746 0.86 -2.1 755,193 + -0.7 755,193 + -1.1 755,215 + -0.1 755,298 + +0.1 755,792 + HP15_747 0.26 +1.8 755,925 - HP15_747 0.35 -2.4 756,243 - HP15_747 0.57 -1.4 756,314 + HP15_747 0.61 +1.6 756,317 - HP15_747 0.62 +1.2 756,342 - HP15_747 0.63 -3.3 756,509 + HP15_747 0.75 -1.0 756,851 - -2.5 756,872 + -0.1 756,877 + -2.8 756,891 + +0.0 756,896 + +0.9 756,954 + -0.0 756,959 + +0.4 756,962 - -2.0 757,169 + +0.0 757,336 - HP15_748 0.13 +0.6 757,406 - HP15_748 0.18 +0.1 757,683 - HP15_748 0.37 -3.0 757,727 + HP15_748 0.40 -0.1 757,735 - HP15_748 0.40 -0.3 757,803 + HP15_748 0.45 -1.6 757,803 + HP15_748 0.45 -2.4
Or see this region's nucleotide sequence