Strain Fitness in Shewanella amazonensis SB2B around Sama_1270

Experiment: benzoic 0.29 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	benzoic 0.29 mg/ml
1,558,256	+		Sama_1269	0.60	-1.5
1,558,767	+				-0.5
1,558,789	+				-0.2
1,558,802	+				+1.5
1,558,803	-				+0.3
1,558,890	-				+0.0
1,558,905	-				-0.2
1,559,026	-		Sama_1270	0.34	+0.2
1,559,026	-		Sama_1270	0.34	-1.5
1,559,082	-		Sama_1270	0.48	-0.5
1,559,136	-		Sama_1270	0.60	-0.2
1,559,136	-		Sama_1270	0.60	-1.5
1,559,154	-		Sama_1270	0.64	-0.7
1,559,199	+		Sama_1270	0.75	-1.7
1,559,199	+		Sama_1270	0.75	-0.2
1,559,200	-		Sama_1270	0.75	-0.7
1,559,200	-		Sama_1270	0.75	+0.1
1,559,267	+				+0.3
1,559,267	+				-1.7
1,559,267	+				+0.1
1,559,268	-				+0.1
1,559,391	+				+1.4
1,559,391	+				-1.7
1,559,392	-				+1.0
1,559,392	-				-0.3
1,559,451	+				+0.8
1,559,452	-				-0.5
1,559,484	-				+0.0
1,559,503	+				-0.2
1,559,538	+				-0.7
1,559,538	+				-0.5
1,559,578	+				+0.1
1,559,579	-				+0.0
1,559,654	+				-0.4
1,559,655	-				-1.3
1,559,692	+				-0.2
1,559,720	+		Sama_1271	0.13	-1.7
1,559,721	-		Sama_1271	0.14	+0.8
1,559,721	-		Sama_1271	0.14	-0.1
1,559,733	+		Sama_1271	0.16	+0.7
1,559,734	-		Sama_1271	0.16	-2.2
1,559,734	-		Sama_1271	0.16	+0.1
1,559,734	-		Sama_1271	0.16	+0.0
1,559,779	+		Sama_1271	0.25	+0.3
1,559,780	-		Sama_1271	0.26	+0.5
1,559,808	+		Sama_1271	0.31	-0.4
1,559,809	-		Sama_1271	0.31	+0.8
1,559,841	+		Sama_1271	0.38	-1.3
1,559,842	-		Sama_1271	0.38	+0.6
1,559,877	+		Sama_1271	0.45	+0.7
1,559,877	+		Sama_1271	0.45	+2.2
1,559,904	+		Sama_1271	0.50	+0.5
1,560,140	+				-0.4
1,560,141	-				+0.1
1,560,141	-				+0.4
1,560,141	-				-1.3
1,560,141	-				+1.2
1,560,184	+				+0.8
1,560,235	+		Sama_1272	0.20	+2.1
1,560,236	-		Sama_1272	0.20	+1.1
1,560,236	-		Sama_1272	0.20	+0.8
1,560,241	-		Sama_1272	0.21	+0.3