Experiment: Aluminum chloride 1.25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Sama_0767 and Sama_0768 are separated by 53 nucleotides Sama_0768 and Sama_0769 are separated by 253 nucleotides Sama_0769 and Sama_0770 are separated by 45 nucleotides Sama_0770 and Sama_0771 are separated by 7 nucleotides
Sama_0767: Sama_0767 - putative methyl-accepting chemotaxis sensory transducer (RefSeq), at 950,251 to 951,891
_0767
Sama_0768: Sama_0768 - hypothetical protein (RefSeq), at 951,945 to 952,535
_0768
Sama_0769: Sama_0769 - UDP-N-acetylmuramate (RefSeq), at 952,789 to 954,165
_0769
Sama_0770: Sama_0770 - aromatic acid decarboxylase (RefSeq), at 954,211 to 954,852
_0770
Sama_0771: Sama_0771 - hypoxanthine phosphoribosyltransferase (RefSeq), at 954,860 to 955,390
_0771
Position (kb)
952
953
954
955 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 951.816 kb on + strand at 951.853 kb on - strand at 951.853 kb on - strand at 951.889 kb on + strand at 951.890 kb on - strand at 951.901 kb on - strand at 951.947 kb on - strand at 951.999 kb on + strand at 952.008 kb on - strand, within Sama_0768 at 952.176 kb on + strand, within Sama_0768 at 952.177 kb on - strand, within Sama_0768 at 952.177 kb on - strand, within Sama_0768 at 952.177 kb on - strand, within Sama_0768 at 952.261 kb on + strand, within Sama_0768 at 952.573 kb on + strand at 952.617 kb on + strand at 952.617 kb on + strand at 952.618 kb on - strand at 952.618 kb on - strand at 952.724 kb on + strand at 952.724 kb on + strand at 952.724 kb on + strand at 952.725 kb on - strand at 952.729 kb on + strand at 952.729 kb on + strand at 952.768 kb on + strand at 952.796 kb on + strand at 952.796 kb on + strand at 952.796 kb on + strand at 952.796 kb on + strand at 952.797 kb on - strand at 952.891 kb on + strand at 952.926 kb on + strand at 953.050 kb on + strand, within Sama_0769 at 953.050 kb on + strand, within Sama_0769 at 953.127 kb on + strand, within Sama_0769 at 953.272 kb on + strand, within Sama_0769 at 953.334 kb on + strand, within Sama_0769 at 953.364 kb on + strand, within Sama_0769 at 953.400 kb on + strand, within Sama_0769 at 953.400 kb on + strand, within Sama_0769 at 953.511 kb on + strand, within Sama_0769 at 953.511 kb on + strand, within Sama_0769 at 953.697 kb on + strand, within Sama_0769 at 953.718 kb on + strand, within Sama_0769 at 953.773 kb on + strand, within Sama_0769 at 953.773 kb on + strand, within Sama_0769 at 953.773 kb on + strand, within Sama_0769 at 953.922 kb on + strand, within Sama_0769 at 953.922 kb on + strand, within Sama_0769 at 953.951 kb on - strand, within Sama_0769 at 953.965 kb on - strand, within Sama_0769 at 954.022 kb on + strand, within Sama_0769 at 954.022 kb on + strand, within Sama_0769 at 954.022 kb on + strand, within Sama_0769 at 954.022 kb on + strand, within Sama_0769 at 954.022 kb on + strand, within Sama_0769 at 954.022 kb on + strand, within Sama_0769 at 954.023 kb on - strand, within Sama_0769 at 954.023 kb on - strand, within Sama_0769 at 954.023 kb on - strand, within Sama_0769 at 954.038 kb on + strand at 954.038 kb on + strand at 954.038 kb on + strand at 954.038 kb on + strand at 954.038 kb on + strand at 954.814 kb on + strand at 954.814 kb on + strand at 954.815 kb on - strand at 954.856 kb on + strand at 954.857 kb on - strand at 954.857 kb on - strand at 954.931 kb on + strand, within Sama_0771 at 954.945 kb on - strand, within Sama_0771 at 954.945 kb on - strand, within Sama_0771 at 954.945 kb on - strand, within Sama_0771 at 955.048 kb on + strand, within Sama_0771 at 955.048 kb on + strand, within Sama_0771 at 955.049 kb on - strand, within Sama_0771 at 955.064 kb on + strand, within Sama_0771 at 955.064 kb on + strand, within Sama_0771 at 955.065 kb on - strand, within Sama_0771 at 955.065 kb on - strand, within Sama_0771 at 955.144 kb on + strand, within Sama_0771 at 955.160 kb on - strand, within Sama_0771
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum chloride 1.25 mM remove 951,816 + -0.6 951,853 - +0.4 951,853 - -0.2 951,889 + -1.4 951,890 - -1.2 951,901 - +0.3 951,947 - -0.0 951,999 + +0.5 952,008 - Sama_0768 0.11 +0.2 952,176 + Sama_0768 0.39 -0.4 952,177 - Sama_0768 0.39 -0.8 952,177 - Sama_0768 0.39 -0.5 952,177 - Sama_0768 0.39 -0.7 952,261 + Sama_0768 0.53 +0.2 952,573 + -0.1 952,617 + +0.2 952,617 + -0.8 952,618 - +0.2 952,618 - +0.7 952,724 + -0.6 952,724 + +0.2 952,724 + -0.6 952,725 - -1.8 952,729 + +1.2 952,729 + -0.3 952,768 + -0.1 952,796 + +1.2 952,796 + -0.2 952,796 + -0.1 952,796 + -0.1 952,797 - -2.0 952,891 + +0.0 952,926 + +1.2 953,050 + Sama_0769 0.19 -0.7 953,050 + Sama_0769 0.19 -1.6 953,127 + Sama_0769 0.25 +2.5 953,272 + Sama_0769 0.35 -0.2 953,334 + Sama_0769 0.40 -1.2 953,364 + Sama_0769 0.42 -0.3 953,400 + Sama_0769 0.44 -0.2 953,400 + Sama_0769 0.44 -1.3 953,511 + Sama_0769 0.52 -0.5 953,511 + Sama_0769 0.52 +0.5 953,697 + Sama_0769 0.66 -2.5 953,718 + Sama_0769 0.67 +1.2 953,773 + Sama_0769 0.71 -0.8 953,773 + Sama_0769 0.71 +1.2 953,773 + Sama_0769 0.71 -0.3 953,922 + Sama_0769 0.82 -0.8 953,922 + Sama_0769 0.82 -0.6 953,951 - Sama_0769 0.84 +0.2 953,965 - Sama_0769 0.85 -0.0 954,022 + Sama_0769 0.90 -0.9 954,022 + Sama_0769 0.90 +0.2 954,022 + Sama_0769 0.90 -1.2 954,022 + Sama_0769 0.90 +0.4 954,022 + Sama_0769 0.90 -1.0 954,022 + Sama_0769 0.90 -0.6 954,023 - Sama_0769 0.90 -0.5 954,023 - Sama_0769 0.90 +0.9 954,023 - Sama_0769 0.90 +0.6 954,038 + +0.2 954,038 + -0.2 954,038 + -0.4 954,038 + +0.8 954,038 + -0.6 954,814 + -0.6 954,814 + -1.1 954,815 - -1.4 954,856 + -0.2 954,857 - +0.0 954,857 - -1.6 954,931 + Sama_0771 0.13 -2.6 954,945 - Sama_0771 0.16 -0.2 954,945 - Sama_0771 0.16 +0.6 954,945 - Sama_0771 0.16 -0.4 955,048 + Sama_0771 0.35 +0.0 955,048 + Sama_0771 0.35 +0.4 955,049 - Sama_0771 0.36 +1.2 955,064 + Sama_0771 0.38 +0.2 955,064 + Sama_0771 0.38 -0.7 955,065 - Sama_0771 0.39 +1.2 955,065 - Sama_0771 0.39 +0.6 955,144 + Sama_0771 0.53 -0.2 955,160 - Sama_0771 0.56 +0.4
Or see this region's nucleotide sequence