Experiment: Aluminum chloride 0.625 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Sama_2756 and pgk are separated by 132 nucleotides pgk and Sama_2758 are separated by 81 nucleotides
Sama_2756: Sama_2756 - fructose-1,6-bisphosphate aldolase (RefSeq), at 3,295,251 to 3,296,318
_2756
Sama_2757: pgk - phosphoglycerate kinase (RefSeq), at 3,296,451 to 3,297,632
pgk
Sama_2758: Sama_2758 - erythrose 4-phosphate dehydrogenase (RefSeq), at 3,297,714 to 3,298,730
_2758
Position (kb)
3296
3297
3298 Strain fitness (log2 ratio)
-2
-1
0
1 at 3295.601 kb on - strand, within Sama_2756 at 3296.332 kb on - strand at 3296.332 kb on - strand at 3296.335 kb on - strand at 3296.427 kb on + strand at 3296.428 kb on - strand at 3296.428 kb on - strand at 3296.428 kb on - strand at 3296.431 kb on - strand at 3296.431 kb on - strand at 3296.431 kb on - strand at 3296.433 kb on + strand at 3296.433 kb on + strand at 3296.433 kb on + strand at 3296.433 kb on + strand at 3296.433 kb on + strand at 3296.434 kb on - strand at 3296.434 kb on - strand at 3296.434 kb on - strand at 3296.434 kb on - strand at 3296.437 kb on - strand at 3296.453 kb on - strand at 3296.453 kb on - strand at 3296.453 kb on - strand at 3296.453 kb on - strand at 3297.647 kb on - strand at 3297.702 kb on + strand at 3297.910 kb on - strand, within Sama_2758 at 3298.328 kb on - strand, within Sama_2758 at 3298.328 kb on - strand, within Sama_2758 at 3298.369 kb on - strand, within Sama_2758 at 3298.375 kb on - strand, within Sama_2758 at 3298.455 kb on + strand, within Sama_2758 at 3298.456 kb on - strand, within Sama_2758 at 3298.456 kb on - strand, within Sama_2758
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum chloride 0.625 mM remove 3,295,601 - Sama_2756 0.33 +0.7 3,296,332 - +1.1 3,296,332 - +1.6 3,296,335 - -0.1 3,296,427 + -0.8 3,296,428 - -1.9 3,296,428 - -0.6 3,296,428 - -0.5 3,296,431 - +0.2 3,296,431 - -0.1 3,296,431 - +0.6 3,296,433 + +1.5 3,296,433 + +0.6 3,296,433 + +1.5 3,296,433 + -1.9 3,296,433 + -0.6 3,296,434 - -0.5 3,296,434 - -0.6 3,296,434 - -1.0 3,296,434 - +0.1 3,296,437 - +0.5 3,296,453 - -0.1 3,296,453 - -0.5 3,296,453 - -0.3 3,296,453 - -1.6 3,297,647 - -1.2 3,297,702 + +0.3 3,297,910 - Sama_2758 0.19 -1.3 3,298,328 - Sama_2758 0.60 +1.0 3,298,328 - Sama_2758 0.60 -0.7 3,298,369 - Sama_2758 0.64 +0.7 3,298,375 - Sama_2758 0.65 -0.0 3,298,455 + Sama_2758 0.73 -0.3 3,298,456 - Sama_2758 0.73 +0.9 3,298,456 - Sama_2758 0.73 -1.0
Or see this region's nucleotide sequence