Strain Fitness in Shewanella amazonensis SB2B around Sama_2778

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,319,970	+		Sama_2777	0.21	-0.5
3,320,033	+		Sama_2777	0.26	+0.1
3,320,033	+		Sama_2777	0.26	+0.1
3,320,056	+		Sama_2777	0.28	-1.3
3,320,057	-		Sama_2777	0.28	+0.1
3,320,057	-		Sama_2777	0.28	-0.4
3,320,221	+		Sama_2777	0.41	-0.3
3,320,221	+		Sama_2777	0.41	-0.6
3,320,221	+		Sama_2777	0.41	-1.0
3,320,222	-		Sama_2777	0.41	-0.0
3,320,222	-		Sama_2777	0.41	+0.4
3,320,222	-		Sama_2777	0.41	+1.1
3,320,222	-		Sama_2777	0.41	-0.5
3,320,361	+		Sama_2777	0.53	-0.9
3,320,362	-		Sama_2777	0.53	-2.2
3,320,362	-		Sama_2777	0.53	+0.2
3,320,362	-		Sama_2777	0.53	+0.1
3,320,385	+		Sama_2777	0.55	+0.5
3,320,385	+		Sama_2777	0.55	+0.8
3,320,385	+		Sama_2777	0.55	-0.5
3,320,386	-		Sama_2777	0.55	-1.5
3,320,386	-		Sama_2777	0.55	-0.0
3,320,386	-		Sama_2777	0.55	+0.7
3,320,386	-		Sama_2777	0.55	-0.5
3,320,386	-		Sama_2777	0.55	-0.5
3,320,386	-		Sama_2777	0.55	+0.5
3,320,412	+		Sama_2777	0.57	-0.2
3,320,413	-		Sama_2777	0.57	+0.7
3,320,421	+		Sama_2777	0.58	-0.1
3,320,422	-		Sama_2777	0.58	-0.1
3,320,442	-		Sama_2777	0.59	-2.0
3,320,471	-		Sama_2777	0.62	+0.8
3,320,486	+		Sama_2777	0.63	+0.2
3,320,540	+		Sama_2777	0.67	-1.2
3,320,580	-		Sama_2777	0.70	-0.1
3,320,580	-		Sama_2777	0.70	+0.7
3,320,586	-		Sama_2777	0.71	-1.1
3,320,605	+		Sama_2777	0.73	-0.8
3,320,606	-		Sama_2777	0.73	+0.8
3,320,628	-		Sama_2777	0.74	-1.1
3,320,628	-		Sama_2777	0.74	+0.3
3,320,761	-		Sama_2777	0.85	+0.3
3,320,763	-		Sama_2777	0.85	+1.2
3,320,840	-				-2.6
3,320,840	-				-0.1
3,320,871	+				+1.5
3,320,871	+				+1.5
3,320,871	+				+0.1
3,320,872	-				-0.7
3,320,889	-				-0.2
3,320,889	-				-0.6
3,320,932	+				+0.5
3,320,932	+				-0.2
3,320,932	+				-1.3
3,320,932	+				+0.4
3,320,932	+				-1.3
3,320,932	+				+0.4
3,320,933	-				-0.3
3,320,933	-				+0.4
3,320,933	-				+0.3
3,320,967	+				+0.7
3,320,967	+				-1.0
3,320,967	+				+1.1
3,320,967	+				-1.4
3,320,967	+				-0.5
3,320,967	+				-1.8
3,320,967	+				+0.9
3,320,967	+				-0.1
3,320,968	-				-0.2
3,320,968	-				-0.7
3,320,968	-				+1.0
3,320,968	-				+0.5
3,320,968	-				+0.4
3,320,968	-				+0.2
3,320,968	-				+1.0
3,320,991	+				-0.0
3,321,173	+		Sama_2778	0.46	-1.9
3,321,173	+		Sama_2778	0.46	+0.5
3,321,173	+		Sama_2778	0.46	-0.0
3,321,174	-		Sama_2778	0.47	-1.8
3,321,174	-		Sama_2778	0.47	-1.1
3,321,205	+		Sama_2778	0.53	-0.5
3,321,244	-		Sama_2778	0.62	-0.6
3,321,244	-		Sama_2778	0.62	-0.4
3,321,312	-		Sama_2778	0.77	+0.3
3,321,368	+		Sama_2778	0.89	+0.4
3,321,368	+		Sama_2778	0.89	-0.4
3,321,368	+		Sama_2778	0.89	-0.8
3,321,369	-		Sama_2778	0.89	-0.8
3,321,369	-		Sama_2778	0.89	-2.0
3,321,393	-				-0.0
3,321,397	-				+0.5
3,321,397	-				+0.8
3,321,470	+				+0.3
3,321,470	+				+0.7
3,321,471	-				-0.4
3,321,471	-				+1.2
3,321,471	-				-2.0
3,321,471	-				-0.5
3,321,520	+				-0.2
3,321,520	+				-0.3
3,321,520	+				+1.2
3,321,520	+				-0.1
3,321,521	-				-0.9
3,321,521	-				-0.3
3,321,521	-				-0.8
3,321,521	-				-0.3
3,321,521	-				-0.8
3,321,521	-				-1.0
3,321,521	-				+0.1
3,321,521	-				-1.0
3,321,521	-				+0.3
3,321,524	+				-0.3
3,321,524	+				-0.3
3,321,524	+				-0.3
3,321,524	+				-0.0
3,321,524	+				-0.6
3,321,524	+				-0.3
3,321,524	+				-2.2
3,321,524	+				+0.2
3,321,524	+				+0.5
3,321,524	+				-0.3
3,321,524	+				+1.5
3,321,524	+				-1.2
3,321,524	+				-0.1
3,321,524	+				+0.3
3,321,524	+				+0.2
3,321,525	-				-0.5
3,321,525	-				-1.0
3,321,525	-				+1.5
3,321,525	-				-0.2
3,321,525	-				-0.8
3,321,525	-				+0.5
3,321,525	-				+0.5
3,321,587	-		Sama_2779	0.15	-0.6
3,321,587	-		Sama_2779	0.15	-1.1
3,321,618	-		Sama_2779	0.18	+0.6
3,321,643	+		Sama_2779	0.20	-0.6
3,321,643	+		Sama_2779	0.20	+0.4
3,321,656	-		Sama_2779	0.21	-0.7
3,321,656	-		Sama_2779	0.21	+0.2
3,321,656	-		Sama_2779	0.21	+0.8
3,321,656	-		Sama_2779	0.21	+0.5
3,321,656	-		Sama_2779	0.21	-1.3
3,321,810	-		Sama_2779	0.35	+0.3
3,321,810	-		Sama_2779	0.35	-0.3
3,321,842	-		Sama_2779	0.37	-0.2
3,321,880	+		Sama_2779	0.41	-0.6
3,321,880	+		Sama_2779	0.41	-0.0
3,321,881	-		Sama_2779	0.41	-1.3
3,321,959	-		Sama_2779	0.48	-0.1
3,322,040	+		Sama_2779	0.55	+1.0
3,322,040	+		Sama_2779	0.55	-0.5
3,322,040	+		Sama_2779	0.55	-0.0
3,322,040	+		Sama_2779	0.55	-0.6
3,322,040	+		Sama_2779	0.55	-0.8
3,322,041	-		Sama_2779	0.55	+0.1
3,322,041	-		Sama_2779	0.55	+0.3
3,322,041	-		Sama_2779	0.55	-1.1
3,322,041	-		Sama_2779	0.55	-1.1
3,322,041	-		Sama_2779	0.55	-1.0
3,322,041	-		Sama_2779	0.55	+1.5
3,322,154	+		Sama_2779	0.65	-0.7
3,322,155	-		Sama_2779	0.65	+0.7
3,322,155	-		Sama_2779	0.65	+0.1
3,322,155	-		Sama_2779	0.65	+1.0
3,322,155	-		Sama_2779	0.65	-0.0
3,322,167	+		Sama_2779	0.66	+0.3
3,322,167	+		Sama_2779	0.66	+1.0
3,322,168	-		Sama_2779	0.66	+1.5
3,322,168	-		Sama_2779	0.66	+1.9
3,322,216	+		Sama_2779	0.70	+0.1
3,322,216	+		Sama_2779	0.70	+0.5
3,322,216	+		Sama_2779	0.70	+0.5
3,322,217	-		Sama_2779	0.70	+0.2
3,322,217	-		Sama_2779	0.70	-0.8
3,322,217	-		Sama_2779	0.70	+0.1
3,322,217	-		Sama_2779	0.70	+1.5
3,322,254	+		Sama_2779	0.74	-1.5
3,322,254	+		Sama_2779	0.74	-0.3
3,322,348	+		Sama_2779	0.82	-1.0