Strain Fitness in Shewanella amazonensis SB2B around Sama_0882

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,071,454	+				-0.5
1,071,466	+				-0.1
1,071,494	+				-1.3
1,071,494	+				+0.5
1,071,537	+				+0.7
1,071,537	+				-0.1
1,071,538	-				+0.0
1,071,538	-				+0.2
1,071,636	+		Sama_0882	0.23	-0.9
1,071,637	-		Sama_0882	0.23	-1.5
1,071,637	-		Sama_0882	0.23	-1.0
1,071,677	-		Sama_0882	0.29	-1.2
1,071,692	+		Sama_0882	0.31	-0.5
1,071,693	-		Sama_0882	0.31	-0.5
1,071,728	+		Sama_0882	0.36	-1.9
1,071,736	+		Sama_0882	0.38	-0.7
1,071,737	-		Sama_0882	0.38	+0.5
1,071,737	-		Sama_0882	0.38	-0.3
1,071,740	+		Sama_0882	0.38	-0.9
1,071,740	+		Sama_0882	0.38	-0.5
1,071,741	-		Sama_0882	0.38	-0.7
1,071,741	-		Sama_0882	0.38	-0.8
1,071,741	-		Sama_0882	0.38	-1.1
1,071,741	-		Sama_0882	0.38	-0.8
1,071,741	-		Sama_0882	0.38	-1.8
1,071,741	-		Sama_0882	0.38	-0.8
1,071,806	+		Sama_0882	0.48	+0.0
1,071,806	+		Sama_0882	0.48	-0.6
1,071,806	+		Sama_0882	0.48	-0.5
1,071,806	+		Sama_0882	0.48	+1.8
1,071,807	-		Sama_0882	0.48	-0.9
1,071,916	+		Sama_0882	0.64	-0.3
1,071,916	+		Sama_0882	0.64	-0.8
1,071,950	+		Sama_0882	0.69	-0.1
1,071,950	+		Sama_0882	0.69	-0.5
1,071,986	-		Sama_0882	0.75	-1.3
1,071,986	-		Sama_0882	0.75	-0.6
1,072,108	+				-0.5
1,072,108	+				+0.5
1,072,108	+				-1.1
1,072,108	+				+0.2
1,072,188	+				+0.1
1,072,188	+				+0.5
1,072,188	+				+0.1
1,072,188	+				+0.2
1,072,188	+				-0.3
1,072,188	+				+1.5
1,072,188	+				-0.2
1,072,189	-				-0.3
1,072,189	-				+1.2
1,072,189	-				-0.1
1,072,189	-				+0.0
1,072,189	-				-0.3
1,072,189	-				-1.9
1,072,189	-				-0.8
1,072,192	+				-0.5
1,072,192	+				+0.0
1,072,192	+				+0.7
1,072,193	-				-0.1
1,072,193	-				-1.1
1,072,193	-				-1.1
1,072,193	-				+1.9
1,072,193	-				-0.7
1,072,193	-				+1.8
1,072,193	-				+1.1
1,072,193	-				-1.9
1,072,193	-				+0.3
1,072,193	-				+0.5
1,072,200	+				-1.1
1,072,200	+				-0.3
1,072,200	+				-1.1
1,072,201	-				-1.4
1,072,202	+				+0.6
1,072,202	+				+0.4
1,072,203	-				+2.1
1,072,225	+				+1.4
1,072,225	+				-0.2
1,073,035	+				-0.5
1,073,035	+				-0.9
1,073,035	+				-1.6
1,073,035	+				+0.5
1,073,035	+				-0.8
1,073,035	+				-2.9
1,073,035	+				-0.6
1,073,035	+				-0.4
1,073,035	+				-1.9
1,073,035	+				-2.8
1,073,035	+				+0.6
1,073,035	+				+0.5
1,073,035	+				+0.6
1,073,035	+				-0.9
1,073,035	+				+0.8
1,073,036	-				+0.2
1,073,036	-				+0.2
1,073,036	-				-1.1
1,073,036	-				-0.5
1,073,036	-				+0.5
1,073,036	-				-0.6
1,073,036	-				-0.6
1,073,036	-				-0.4
1,073,051	+	acpS	Sama_0884	0.12	+0.5
1,073,152	-	acpS	Sama_0884	0.38	-0.3
1,073,152	-	acpS	Sama_0884	0.38	+0.5