Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c31360

Experiment: L-Proline (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Proline (C)
3,276,742	+		PGA1_c31350	0.39	-0.3
3,276,750	-		PGA1_c31350	0.40	+0.3
3,276,755	+		PGA1_c31350	0.40	+1.6
3,276,755	+		PGA1_c31350	0.40	+0.3
3,276,755	+		PGA1_c31350	0.40	+0.4
3,276,763	-		PGA1_c31350	0.40	-0.5
3,276,771	+		PGA1_c31350	0.41	-0.7
3,276,857	+		PGA1_c31350	0.46	+1.5
3,276,902	+		PGA1_c31350	0.49	+0.6
3,276,962	-		PGA1_c31350	0.53	-1.0
3,276,987	+		PGA1_c31350	0.55	+1.6
3,276,987	+		PGA1_c31350	0.55	-0.1
3,277,027	+		PGA1_c31350	0.57	-0.5
3,277,035	-		PGA1_c31350	0.58	+0.1
3,277,063	+		PGA1_c31350	0.59	-0.1
3,277,063	+		PGA1_c31350	0.59	-1.1
3,277,068	+		PGA1_c31350	0.60	+0.5
3,277,068	+		PGA1_c31350	0.60	-2.7
3,277,076	-		PGA1_c31350	0.60	+1.9
3,277,083	+		PGA1_c31350	0.61	-0.6
3,277,088	+		PGA1_c31350	0.61	+0.8
3,277,103	-		PGA1_c31350	0.62	-1.4
3,277,140	+		PGA1_c31350	0.64	+0.3
3,277,146	-		PGA1_c31350	0.65	+0.5
3,277,160	-		PGA1_c31350	0.66	-2.0
3,277,200	+		PGA1_c31350	0.68	-0.5
3,277,208	-		PGA1_c31350	0.69	+0.7
3,277,233	+		PGA1_c31350	0.70	+0.8
3,277,233	+		PGA1_c31350	0.70	+0.9
3,277,241	-		PGA1_c31350	0.71	+0.5
3,277,247	+		PGA1_c31350	0.71	-2.1
3,277,247	+		PGA1_c31350	0.71	+0.5
3,277,247	+		PGA1_c31350	0.71	-3.5
3,277,255	-		PGA1_c31350	0.72	-0.4
3,277,255	-		PGA1_c31350	0.72	+0.6
3,277,255	-		PGA1_c31350	0.72	-0.6
3,277,255	-		PGA1_c31350	0.72	+0.9
3,277,257	+		PGA1_c31350	0.72	-0.7
3,277,257	+		PGA1_c31350	0.72	-1.5
3,277,257	+		PGA1_c31350	0.72	+0.7
3,277,265	-		PGA1_c31350	0.72	-1.6
3,277,298	-		PGA1_c31350	0.74	-1.9
3,277,341	+		PGA1_c31350	0.77	+0.2
3,277,422	+		PGA1_c31350	0.82	-2.7
3,277,422	+		PGA1_c31350	0.82	-0.2
3,277,430	-		PGA1_c31350	0.83	+1.1
3,277,462	+		PGA1_c31350	0.85	-0.1
3,277,468	-		PGA1_c31350	0.85	+0.2
3,277,470	-		PGA1_c31350	0.85	-1.4
3,277,517	-		PGA1_c31350	0.88	+0.5
3,277,556	+				-0.1
3,277,637	-				-0.4
3,277,640	-				+0.3
3,277,651	-				-1.0
3,277,660	+				+0.1
3,277,709	-				-0.5
3,277,719	-				+0.4
3,277,745	-				-1.2
3,277,756	-				+0.2
3,277,868	+		PGA1_c31360	0.14	+0.6
3,277,887	+		PGA1_c31360	0.15	+0.5
3,277,895	-		PGA1_c31360	0.16	-1.4
3,277,895	-		PGA1_c31360	0.16	+1.1
3,277,913	-		PGA1_c31360	0.17	+1.0
3,277,940	-		PGA1_c31360	0.19	-0.0
3,277,969	-		PGA1_c31360	0.21	+1.0
3,277,971	+		PGA1_c31360	0.22	-0.5
3,278,039	+		PGA1_c31360	0.27	-0.5
3,278,052	-		PGA1_c31360	0.28	-0.3
3,278,065	-		PGA1_c31360	0.29	-1.2
3,278,171	-		PGA1_c31360	0.37	+0.1
3,278,198	+		PGA1_c31360	0.39	+0.7
3,278,209	-		PGA1_c31360	0.40	+0.2
3,278,235	+		PGA1_c31360	0.42	+1.0
3,278,279	+		PGA1_c31360	0.46	+1.4
3,278,293	+		PGA1_c31360	0.47	-0.5
3,278,341	+		PGA1_c31360	0.51	+0.6
3,278,361	-		PGA1_c31360	0.52	+0.6
3,278,370	+		PGA1_c31360	0.53	+0.1
3,278,385	+		PGA1_c31360	0.54	-0.1
3,278,385	+		PGA1_c31360	0.54	-0.6
3,278,385	+		PGA1_c31360	0.54	+2.3
3,278,393	-		PGA1_c31360	0.55	-0.9
3,278,393	-		PGA1_c31360	0.55	+0.4
3,278,393	-		PGA1_c31360	0.55	+1.0
3,278,434	+		PGA1_c31360	0.58	+0.3
3,278,462	-		PGA1_c31360	0.60	+0.1
3,278,462	-		PGA1_c31360	0.60	+0.6
3,278,481	-		PGA1_c31360	0.62	+0.5
3,278,552	-		PGA1_c31360	0.67	+1.7
3,278,564	-		PGA1_c31360	0.68	-1.3
3,278,613	-		PGA1_c31360	0.72	+1.1
3,278,620	-		PGA1_c31360	0.73	-0.0
3,278,649	-		PGA1_c31360	0.75	+0.5
3,278,649	-		PGA1_c31360	0.75	-0.7
3,278,649	-		PGA1_c31360	0.75	+0.6
3,278,649	-		PGA1_c31360	0.75	+0.5
3,278,652	-		PGA1_c31360	0.75	-2.3
3,278,652	-		PGA1_c31360	0.75	+1.7
3,278,652	-		PGA1_c31360	0.75	+0.7
3,278,708	+		PGA1_c31360	0.79	-1.0
3,278,724	+		PGA1_c31360	0.81	+0.8
3,278,740	-		PGA1_c31360	0.82	+1.4
3,278,740	-		PGA1_c31360	0.82	+0.9
3,278,819	+		PGA1_c31360	0.88	+0.6
3,278,870	+				+1.7
3,278,878	-				+1.1
3,278,880	+				-0.1
3,278,959	+				+0.3
3,278,964	+				-0.1
3,278,967	-				+0.2
3,278,969	+				-1.0
3,278,972	-				-0.0
3,279,003	-				+0.2
3,279,037	-		PGA1_c31370	0.13	+0.9
3,279,056	-		PGA1_c31370	0.17	-2.5
3,279,056	-		PGA1_c31370	0.17	-0.3
3,279,056	-		PGA1_c31370	0.17	+1.0
3,279,069	+		PGA1_c31370	0.20	+1.2
3,279,077	-		PGA1_c31370	0.22	-1.0
3,279,149	+		PGA1_c31370	0.39	-0.2
3,279,149	+		PGA1_c31370	0.39	+1.1
3,279,156	-		PGA1_c31370	0.40	+1.8
3,279,157	-		PGA1_c31370	0.41	+0.3
3,279,164	+		PGA1_c31370	0.42	-0.2
3,279,177	-		PGA1_c31370	0.45	-1.1
3,279,224	+		PGA1_c31370	0.56	-1.5
3,279,227	-		PGA1_c31370	0.57	-0.8
3,279,227	-		PGA1_c31370	0.57	+0.2
3,279,253	+		PGA1_c31370	0.63	+0.4
3,279,285	+		PGA1_c31370	0.70	-0.3
3,279,285	+		PGA1_c31370	0.70	+0.6
3,279,290	+		PGA1_c31370	0.71	+0.6
3,279,291	-		PGA1_c31370	0.71	-0.3
3,279,298	-		PGA1_c31370	0.73	-1.0
3,279,303	-		PGA1_c31370	0.74	+0.8
3,279,304	+		PGA1_c31370	0.74	+0.4
3,279,319	+		PGA1_c31370	0.78	-0.4
3,279,319	+		PGA1_c31370	0.78	+2.5
3,279,327	-		PGA1_c31370	0.80	+2.2
3,279,327	-		PGA1_c31370	0.80	-2.2
3,279,359	-		PGA1_c31370	0.87	-0.3
3,279,387	+				-0.9
3,279,395	-				-0.6
3,279,405	+				-0.0
3,279,410	+				-1.1
3,279,418	-		PGA1_c31380	0.15	+0.4
3,279,456	+		PGA1_c31380	0.38	-0.4
3,279,464	-		PGA1_c31380	0.43	+1.0
3,279,472	-		PGA1_c31380	0.48	+0.4
3,279,489	+		PGA1_c31380	0.58	+0.8
3,279,498	+		PGA1_c31380	0.63	+0.8
3,279,503	-		PGA1_c31380	0.66	-0.7
3,279,507	+		PGA1_c31380	0.68	-1.3
3,279,520	-		PGA1_c31380	0.76	-0.1
3,279,628	+				+0.4
3,279,628	+				+0.1
3,279,628	+				-0.1
3,279,636	-				-1.3
3,279,636	-				-1.9
3,279,636	-				+1.8
3,279,636	-				-1.9
3,279,707	-				+0.3
3,279,713	+				+0.1
3,279,713	+				+0.6
3,279,713	+				+0.4
3,279,713	+				-3.5
3,279,713	+				+0.5
3,279,721	-				-1.7
3,279,721	-				+0.7
3,279,721	-				+0.5
3,279,721	-				+1.6
3,279,721	-				-0.2
3,279,721	-				-0.9
3,279,721	-				-1.7
3,279,750	+				+0.9
3,279,769	+				+0.3
3,279,807	-		PGA1_c31390	0.12	+0.2
3,279,807	-		PGA1_c31390	0.12	-0.5
3,279,849	+		PGA1_c31390	0.15	+0.2
3,279,849	+		PGA1_c31390	0.15	+1.0
3,279,861	+		PGA1_c31390	0.15	-0.3
3,279,908	+		PGA1_c31390	0.19	-0.6
3,279,954	-		PGA1_c31390	0.22	-3.1
3,279,954	-		PGA1_c31390	0.22	+0.7