Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c27270

Experiment: L-Proline (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Proline (C)
2,839,757	+		PGA1_c27250	0.65	+0.7
2,839,778	+		PGA1_c27250	0.68	+0.9
2,839,804	-		PGA1_c27250	0.72	-0.8
2,839,809	-		PGA1_c27250	0.73	+0.7
2,839,869	+		PGA1_c27250	0.82	-2.4
2,839,875	+		PGA1_c27250	0.82	-0.4
2,839,877	-		PGA1_c27250	0.83	+0.4
2,839,877	-		PGA1_c27250	0.83	+0.8
2,839,934	-				+0.6
2,839,952	-				-1.1
2,839,990	+				-0.7
2,839,990	+				+0.9
2,839,998	-				-0.9
2,839,998	-				+0.6
2,839,998	-				+0.6
2,839,998	-				-0.4
2,839,998	-				-0.5
2,840,006	+				-0.2
2,840,006	+				-1.1
2,840,006	+				+0.7
2,840,006	+				+0.8
2,840,014	-				-2.9
2,840,014	-				+0.7
2,840,090	-		PGA1_c27260	0.10	+0.2
2,840,113	+		PGA1_c27260	0.13	+0.9
2,840,121	-		PGA1_c27260	0.14	+1.3
2,840,121	-		PGA1_c27260	0.14	-1.4
2,840,138	+		PGA1_c27260	0.17	-1.2
2,840,138	+		PGA1_c27260	0.17	+0.8
2,840,146	-		PGA1_c27260	0.18	+0.1
2,840,146	-		PGA1_c27260	0.18	+1.7
2,840,248	+		PGA1_c27260	0.32	+0.2
2,840,273	+		PGA1_c27260	0.35	-0.4
2,840,278	-		PGA1_c27260	0.36	-0.7
2,840,281	-		PGA1_c27260	0.37	-0.3
2,840,306	-		PGA1_c27260	0.40	+0.2
2,840,324	-		PGA1_c27260	0.42	-1.2
2,840,327	+		PGA1_c27260	0.43	+0.7
2,840,414	+		PGA1_c27260	0.55	+0.9
2,840,503	+		PGA1_c27260	0.67	+0.2
2,840,573	-		PGA1_c27260	0.77	-0.4
2,840,591	+		PGA1_c27260	0.80	-0.5
2,840,599	-		PGA1_c27260	0.81	-0.4
2,840,635	+		PGA1_c27260	0.86	+1.6
2,840,635	+		PGA1_c27260	0.86	-0.1
2,840,635	+		PGA1_c27260	0.86	-1.8
2,840,643	-		PGA1_c27260	0.87	-0.2
2,840,643	-		PGA1_c27260	0.87	+0.6
2,840,643	-		PGA1_c27260	0.87	+0.9
2,840,643	-		PGA1_c27260	0.87	-1.4
2,840,643	-		PGA1_c27260	0.87	+1.8
2,840,661	+		PGA1_c27260	0.89	+1.0
2,840,663	+		PGA1_c27260	0.90	-1.3
2,840,708	-				-3.1
2,840,716	+				-0.6
2,840,718	-				-0.7
2,840,770	+				+0.4
2,840,772	-				+2.2
2,840,773	-				-0.2
2,840,804	+				-1.3
2,840,832	-				-0.3
2,840,882	-		PGA1_c27270	0.11	+1.0
2,840,900	+		PGA1_c27270	0.12	+0.5
2,840,969	+		PGA1_c27270	0.17	+0.1
2,840,984	-		PGA1_c27270	0.18	+0.7
2,840,984	-		PGA1_c27270	0.18	+0.4
2,840,984	-		PGA1_c27270	0.18	-0.4
2,840,986	+		PGA1_c27270	0.19	-2.5
2,840,994	-		PGA1_c27270	0.19	+0.8
2,840,994	-		PGA1_c27270	0.19	+0.6
2,841,007	+		PGA1_c27270	0.20	+0.7
2,841,007	+		PGA1_c27270	0.20	-0.3
2,841,009	-		PGA1_c27270	0.20	-0.8
2,841,015	-		PGA1_c27270	0.21	+1.9
2,841,040	+		PGA1_c27270	0.22	+0.2
2,841,040	+		PGA1_c27270	0.22	-3.1
2,841,048	-		PGA1_c27270	0.23	+0.5
2,841,048	-		PGA1_c27270	0.23	+1.3
2,841,048	-		PGA1_c27270	0.23	+1.4
2,841,093	-		PGA1_c27270	0.26	+1.2
2,841,093	-		PGA1_c27270	0.26	+1.3
2,841,101	+		PGA1_c27270	0.27	+0.1
2,841,117	+		PGA1_c27270	0.28	-2.9
2,841,117	+		PGA1_c27270	0.28	+1.3
2,841,125	-		PGA1_c27270	0.28	+1.0
2,841,134	-		PGA1_c27270	0.29	-1.6
2,841,158	+		PGA1_c27270	0.31	+0.3
2,841,158	+		PGA1_c27270	0.31	+0.3
2,841,158	+		PGA1_c27270	0.31	+0.5
2,841,158	+		PGA1_c27270	0.31	+1.7
2,841,166	-		PGA1_c27270	0.31	-1.5
2,841,168	-		PGA1_c27270	0.32	-0.2
2,841,189	-		PGA1_c27270	0.33	+0.6
2,841,262	-		PGA1_c27270	0.38	+0.8
2,841,421	+		PGA1_c27270	0.50	+0.3
2,841,499	+		PGA1_c27270	0.55	+0.8
2,841,499	+		PGA1_c27270	0.55	-2.4
2,841,507	-		PGA1_c27270	0.56	+1.3
2,841,507	-		PGA1_c27270	0.56	+2.3
2,841,507	-		PGA1_c27270	0.56	-0.2
2,841,542	+		PGA1_c27270	0.58	+1.0
2,841,589	-		PGA1_c27270	0.62	-1.8
2,841,606	+		PGA1_c27270	0.63	-0.2
2,841,608	-		PGA1_c27270	0.63	+0.1
2,841,642	+		PGA1_c27270	0.65	-2.5
2,841,777	+		PGA1_c27270	0.75	+0.9
2,841,822	-		PGA1_c27270	0.78	+2.4
2,841,824	+		PGA1_c27270	0.78	-2.4
2,841,824	+		PGA1_c27270	0.78	-0.6
2,841,865	-		PGA1_c27270	0.81	-1.9
2,841,865	-		PGA1_c27270	0.81	+0.5
2,841,901	+		PGA1_c27270	0.84	+0.4
2,841,922	+		PGA1_c27270	0.85	+0.9
2,841,927	+		PGA1_c27270	0.86	-1.6
2,841,985	-				-0.9
2,842,127	+				-0.2
2,842,131	+				+0.3
2,842,170	+				-0.4
2,842,172	+				-1.0
2,842,180	+				+0.4
2,842,180	-				+0.2
2,842,180	-				+0.9
2,842,180	-				+0.7
2,842,180	-				+0.3
2,842,180	-				-1.2
2,842,180	-				+0.2
2,842,180	-				+1.7
2,842,180	-				-0.7
2,842,180	-				-1.0
2,842,180	-				+1.5
2,842,195	+				-0.3
2,842,195	+				-0.5
2,842,196	-				-0.5
2,842,203	-				+1.1
2,842,216	+				+0.0
2,842,224	-				-1.1
2,842,244	+				+1.2
2,842,251	+				-2.1
2,842,251	+				+0.0
2,842,259	-				+0.5
2,842,259	-				+0.9
2,842,259	-				+1.7
2,842,259	-				-0.2
2,842,259	-				-2.3
2,842,259	-				-0.4
2,842,259	-				-0.2
2,842,284	+				-0.8
2,842,292	-				+0.7
2,842,315	+				-0.6
2,842,318	-				+0.2
2,842,323	-				-0.6
2,842,324	-				-0.3
2,842,330	-				-0.4
2,842,332	+				+0.2
2,842,339	+				-0.4
2,842,340	-				+0.2
2,842,409	+				-0.3
2,842,409	+				+0.3
2,842,409	+				-0.9
2,842,417	-				+1.0
2,842,425	+		PGA1_c27280	0.10	-2.4
2,842,434	-		PGA1_c27280	0.11	+0.9
2,842,448	-		PGA1_c27280	0.11	-1.3
2,842,465	+		PGA1_c27280	0.12	+0.3
2,842,538	+		PGA1_c27280	0.16	-0.2
2,842,563	-		PGA1_c27280	0.17	+0.3
2,842,567	-		PGA1_c27280	0.18	-1.6
2,842,627	-		PGA1_c27280	0.21	-0.3
2,842,627	-		PGA1_c27280	0.21	-0.0
2,842,689	+		PGA1_c27280	0.24	+0.6
2,842,697	-		PGA1_c27280	0.25	-0.3
2,842,708	-		PGA1_c27280	0.25	-0.1
2,842,708	-		PGA1_c27280	0.25	-2.1
2,842,739	-		PGA1_c27280	0.27	-0.2
2,842,867	-		PGA1_c27280	0.34	-0.1
2,842,872	-		PGA1_c27280	0.34	-1.1
2,843,041	-		PGA1_c27280	0.43	+1.1
2,843,041	-		PGA1_c27280	0.43	+0.7
2,843,043	+		PGA1_c27280	0.43	+0.4
2,843,055	+		PGA1_c27280	0.44	-0.2
2,843,055	+		PGA1_c27280	0.44	-0.2
2,843,055	+		PGA1_c27280	0.44	+0.7
2,843,055	+		PGA1_c27280	0.44	-1.2
2,843,063	-		PGA1_c27280	0.44	+0.8
2,843,063	-		PGA1_c27280	0.44	-1.4
2,843,063	-		PGA1_c27280	0.44	-2.3
2,843,063	-		PGA1_c27280	0.44	-0.2
2,843,063	-		PGA1_c27280	0.44	-0.7
2,843,073	-		PGA1_c27280	0.45	+0.2