Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c27160

Experiment: L-Proline (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Proline (C)
2,827,817	+		PGA1_c27140	0.50	+1.8
2,827,822	+		PGA1_c27140	0.51	-0.3
2,827,830	-		PGA1_c27140	0.52	-0.8
2,827,830	-		PGA1_c27140	0.52	-0.8
2,827,830	-		PGA1_c27140	0.52	-1.2
2,827,897	-		PGA1_c27140	0.60	+0.9
2,827,922	-		PGA1_c27140	0.63	-0.6
2,827,992	-		PGA1_c27140	0.72	+1.5
2,827,993	+		PGA1_c27140	0.72	-2.5
2,828,009	-		PGA1_c27140	0.74	+0.6
2,828,073	+		PGA1_c27140	0.82	-0.6
2,828,089	+		PGA1_c27140	0.84	-0.3
2,828,126	+		PGA1_c27140	0.88	-1.9
2,828,134	-		PGA1_c27140	0.89	-0.1
2,828,134	-		PGA1_c27140	0.89	+0.4
2,828,134	-		PGA1_c27140	0.89	+0.5
2,828,134	-		PGA1_c27140	0.89	-0.0
2,828,134	-		PGA1_c27140	0.89	-0.1
2,828,134	-		PGA1_c27140	0.89	+1.4
2,828,179	+				+0.6
2,828,215	+				-1.8
2,828,223	-				+0.4
2,828,282	-		PGA1_c27150	0.12	-1.9
2,828,327	-		PGA1_c27150	0.19	-1.9
2,828,337	-		PGA1_c27150	0.21	-1.7
2,828,353	+		PGA1_c27150	0.23	-1.8
2,828,362	+		PGA1_c27150	0.25	+0.3
2,828,362	+		PGA1_c27150	0.25	-2.3
2,828,394	+		PGA1_c27150	0.30	+0.6
2,828,402	-		PGA1_c27150	0.32	+1.2
2,828,402	-		PGA1_c27150	0.32	-2.4
2,828,410	+		PGA1_c27150	0.33	+0.5
2,828,410	+		PGA1_c27150	0.33	+0.4
2,828,418	-		PGA1_c27150	0.34	+0.9
2,828,447	+		PGA1_c27150	0.39	-1.0
2,828,452	+		PGA1_c27150	0.40	+0.0
2,828,452	+		PGA1_c27150	0.40	+0.3
2,828,460	-		PGA1_c27150	0.41	+1.4
2,828,460	-		PGA1_c27150	0.41	-0.1
2,828,496	+		PGA1_c27150	0.47	+0.5
2,828,504	-		PGA1_c27150	0.49	-0.9
2,828,517	-		PGA1_c27150	0.51	-0.1
2,828,531	-		PGA1_c27150	0.53	+1.4
2,828,585	-		PGA1_c27150	0.62	-0.7
2,828,622	-		PGA1_c27150	0.69	+0.6
2,828,623	-		PGA1_c27150	0.69	-1.3
2,828,637	+		PGA1_c27150	0.71	-3.0
2,828,652	+		PGA1_c27150	0.74	+0.7
2,828,667	+		PGA1_c27150	0.76	+1.9
2,828,696	+		PGA1_c27150	0.81	+0.1
2,828,701	+		PGA1_c27150	0.82	+0.2
2,828,755	-				+0.9
2,828,788	+				-0.7
2,828,788	+				+0.3
2,828,811	-				-0.4
2,828,813	+				+0.9
2,828,813	+				-0.0
2,828,821	-				+1.9
2,828,821	-				+0.3
2,828,830	+				-1.1
2,828,882	-				+0.1
2,828,908	+				+1.9
2,828,962	+		PGA1_c27160	0.10	-1.9
2,828,970	-		PGA1_c27160	0.11	-2.2
2,829,020	+		PGA1_c27160	0.14	-1.6
2,829,027	-		PGA1_c27160	0.15	-0.8
2,829,028	-		PGA1_c27160	0.15	+1.0
2,829,054	+		PGA1_c27160	0.16	+0.0
2,829,062	-		PGA1_c27160	0.17	-0.4
2,829,087	+		PGA1_c27160	0.18	-0.4
2,829,087	+		PGA1_c27160	0.18	-0.9
2,829,087	+		PGA1_c27160	0.18	+1.8
2,829,087	+		PGA1_c27160	0.18	+0.5
2,829,087	+		PGA1_c27160	0.18	+1.1
2,829,087	+		PGA1_c27160	0.18	+0.4
2,829,087	+		PGA1_c27160	0.18	+0.8
2,829,095	-		PGA1_c27160	0.19	-0.4
2,829,190	-		PGA1_c27160	0.25	+0.9
2,829,241	+		PGA1_c27160	0.29	-0.3
2,829,276	+		PGA1_c27160	0.31	+0.1
2,829,276	+		PGA1_c27160	0.31	-0.7
2,829,278	+		PGA1_c27160	0.31	-0.0
2,829,294	-		PGA1_c27160	0.32	-2.0
2,829,330	+		PGA1_c27160	0.35	+0.5
2,829,330	+		PGA1_c27160	0.35	-1.2
2,829,338	-		PGA1_c27160	0.35	-0.3
2,829,338	-		PGA1_c27160	0.35	+0.6
2,829,409	-		PGA1_c27160	0.40	-0.7
2,829,411	+		PGA1_c27160	0.40	-0.9
2,829,413	-		PGA1_c27160	0.40	-0.6
2,829,427	+		PGA1_c27160	0.41	-1.6
2,829,434	+		PGA1_c27160	0.42	-1.8
2,829,435	-		PGA1_c27160	0.42	+1.9
2,829,494	-		PGA1_c27160	0.46	-0.3
2,829,547	-		PGA1_c27160	0.49	-0.4
2,829,547	-		PGA1_c27160	0.49	+1.4
2,829,584	-		PGA1_c27160	0.52	-3.4
2,829,586	+		PGA1_c27160	0.52	+0.1
2,829,586	+		PGA1_c27160	0.52	+0.1
2,829,586	+		PGA1_c27160	0.52	-0.7
2,829,586	+		PGA1_c27160	0.52	+0.4
2,829,594	-		PGA1_c27160	0.52	-0.8
2,829,594	-		PGA1_c27160	0.52	-0.3
2,829,594	-		PGA1_c27160	0.52	-1.4
2,829,594	-		PGA1_c27160	0.52	+1.0
2,829,594	-		PGA1_c27160	0.52	-1.4
2,829,594	-		PGA1_c27160	0.52	-0.6
2,829,623	+		PGA1_c27160	0.54	+0.1
2,829,631	+		PGA1_c27160	0.55	+1.5
2,829,668	-		PGA1_c27160	0.57	-1.4
2,829,678	-		PGA1_c27160	0.58	-2.4
2,829,718	+		PGA1_c27160	0.60	-0.6
2,829,718	+		PGA1_c27160	0.60	-1.3
2,829,759	-		PGA1_c27160	0.63	+1.4
2,829,779	+		PGA1_c27160	0.65	+1.2
2,829,803	-		PGA1_c27160	0.66	-0.1
2,829,823	+		PGA1_c27160	0.67	+0.8
2,829,891	+		PGA1_c27160	0.72	-0.9
2,829,891	+		PGA1_c27160	0.72	-0.6
2,830,024	+		PGA1_c27160	0.81	+0.3
2,830,044	+		PGA1_c27160	0.82	+0.6
2,830,088	+		PGA1_c27160	0.85	-0.2
2,830,091	-		PGA1_c27160	0.85	+0.4
2,830,098	+		PGA1_c27160	0.86	-1.2
2,830,098	+		PGA1_c27160	0.86	+0.5
2,830,106	-		PGA1_c27160	0.86	+1.2
2,830,107	-		PGA1_c27160	0.86	-1.3
2,830,145	+		PGA1_c27160	0.89	-0.8
2,830,145	+		PGA1_c27160	0.89	-0.8
2,830,145	+		PGA1_c27160	0.89	-0.6
2,830,244	-				-2.1
2,830,244	-				+0.3
2,830,245	-				-0.1
2,830,276	+				-0.1
2,830,277	+				-1.6
2,830,342	-				+0.3
2,830,373	+				-2.5
2,830,427	+				-0.4
2,830,451	-				+0.9
2,830,462	+				-1.9
2,830,493	+		PGA1_c27170	0.13	-2.8
2,830,495	+		PGA1_c27170	0.13	-1.4
2,830,511	+		PGA1_c27170	0.14	+0.3
2,830,541	+		PGA1_c27170	0.17	+1.4
2,830,560	+		PGA1_c27170	0.19	-3.8
2,830,567	+		PGA1_c27170	0.20	+0.1
2,830,568	-		PGA1_c27170	0.20	-0.2
2,830,568	-		PGA1_c27170	0.20	-0.1
2,830,578	+		PGA1_c27170	0.21	+0.2
2,830,578	+		PGA1_c27170	0.21	-0.7
2,830,611	+		PGA1_c27170	0.24	+0.1
2,830,619	+		PGA1_c27170	0.25	-0.7
2,830,619	-		PGA1_c27170	0.25	-1.6
2,830,619	-		PGA1_c27170	0.25	+0.0
2,830,643	-		PGA1_c27170	0.27	-2.3
2,830,692	+		PGA1_c27170	0.32	-1.8
2,830,720	-		PGA1_c27170	0.34	-0.4
2,830,750	+		PGA1_c27170	0.37	+0.6
2,830,755	+		PGA1_c27170	0.38	+0.8
2,830,797	-		PGA1_c27170	0.42	+0.2
2,830,802	-		PGA1_c27170	0.42	+0.4
2,830,867	+		PGA1_c27170	0.49	+0.4
2,830,874	-		PGA1_c27170	0.49	+1.2
2,830,875	+		PGA1_c27170	0.49	-1.9
2,830,938	+		PGA1_c27170	0.56	+0.4
2,831,010	+		PGA1_c27170	0.63	-0.6
2,831,018	-		PGA1_c27170	0.63	+0.5
2,831,027	+		PGA1_c27170	0.64	-0.8
2,831,027	+		PGA1_c27170	0.64	-0.5
2,831,088	-		PGA1_c27170	0.70	+0.9
2,831,089	-		PGA1_c27170	0.70	+1.1
2,831,103	-		PGA1_c27170	0.71	-2.1
2,831,150	+		PGA1_c27170	0.76	-0.5
2,831,150	+		PGA1_c27170	0.76	-0.7
2,831,150	+		PGA1_c27170	0.76	-0.3
2,831,150	+		PGA1_c27170	0.76	-0.9
2,831,158	-		PGA1_c27170	0.77	-1.2
2,831,158	-		PGA1_c27170	0.77	+0.9
2,831,164	+		PGA1_c27170	0.77	-0.4
2,831,173	+		PGA1_c27170	0.78	+0.2
2,831,181	-		PGA1_c27170	0.79	-1.8
2,831,181	-		PGA1_c27170	0.79	-1.0
2,831,198	+		PGA1_c27170	0.81	+0.3
2,831,198	+		PGA1_c27170	0.81	-0.3
2,831,206	-		PGA1_c27170	0.81	+0.7
2,831,225	+		PGA1_c27170	0.83	-0.9
2,831,264	+		PGA1_c27170	0.87	-0.2
2,831,266	+		PGA1_c27170	0.87	-0.8
2,831,266	+		PGA1_c27170	0.87	+0.1
2,831,266	+		PGA1_c27170	0.87	-1.1
2,831,272	-		PGA1_c27170	0.88	+1.4
2,831,274	-		PGA1_c27170	0.88	+0.4