Strain Fitness in Shewanella amazonensis SB2B around Sama_3029

Experiment: sodium fluoride 50 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	sodium fluoride 50 mM
3,604,233	-				-1.6
3,604,235	+				+0.5
3,604,241	-				-0.3
3,604,241	-				+0.2
3,604,262	-				-0.1
3,604,719	-				+1.3
3,604,719	-				-0.8
3,604,758	-				+0.9
3,604,758	-				-1.2
3,604,758	-				-0.8
3,604,760	-				-1.3
3,604,760	-				+0.4
3,604,773	-				-0.1
3,604,778	-				+0.3
3,604,786	-				-0.1
3,604,804	-				-0.2
3,604,804	-				-0.7
3,604,926	+		Sama_3030	0.10	-1.6
3,604,940	-		Sama_3030	0.11	-0.7
3,604,940	-		Sama_3030	0.11	+1.5
3,604,940	-		Sama_3030	0.11	+0.5
3,604,941	+		Sama_3030	0.11	+0.1
3,604,942	-		Sama_3030	0.11	+0.7
3,604,942	-		Sama_3030	0.11	-0.4
3,604,948	+		Sama_3030	0.12	-0.1
3,604,948	+		Sama_3030	0.12	-1.5
3,604,948	+		Sama_3030	0.12	+0.3
3,604,949	-		Sama_3030	0.12	+0.2
3,604,949	-		Sama_3030	0.12	-0.5
3,605,011	-		Sama_3030	0.16	-2.8
3,605,011	-		Sama_3030	0.16	+0.2
3,605,021	+		Sama_3030	0.17	-0.8
3,605,021	+		Sama_3030	0.17	-0.5
3,605,021	+		Sama_3030	0.17	+0.3
3,605,022	-		Sama_3030	0.17	+0.1
3,605,025	+		Sama_3030	0.17	-0.7
3,605,025	+		Sama_3030	0.17	-0.9
3,605,025	+		Sama_3030	0.17	+0.2
3,605,025	+		Sama_3030	0.17	+0.1
3,605,025	+		Sama_3030	0.17	-0.4
3,605,025	+		Sama_3030	0.17	-0.7
3,605,025	+		Sama_3030	0.17	-0.3
3,605,025	+		Sama_3030	0.17	+1.5
3,605,026	-		Sama_3030	0.17	+0.1
3,605,026	-		Sama_3030	0.17	+1.0
3,605,026	-		Sama_3030	0.17	+0.3
3,605,026	-		Sama_3030	0.17	-0.4
3,605,026	-		Sama_3030	0.17	-0.5
3,605,026	-		Sama_3030	0.17	-0.7
3,605,026	-		Sama_3030	0.17	+0.7
3,605,026	-		Sama_3030	0.17	+0.6
3,605,026	-		Sama_3030	0.17	+0.5
3,605,031	+		Sama_3030	0.17	+0.4
3,605,031	+		Sama_3030	0.17	-1.3
3,605,031	+		Sama_3030	0.17	-1.4
3,605,031	+		Sama_3030	0.17	-0.3
3,605,032	-		Sama_3030	0.18	+0.6
3,605,032	-		Sama_3030	0.18	-1.6
3,605,032	-		Sama_3030	0.18	+1.3
3,605,032	-		Sama_3030	0.18	-0.2
3,605,032	-		Sama_3030	0.18	+0.9
3,605,032	-		Sama_3030	0.18	-0.8
3,605,074	+		Sama_3030	0.20	+0.3
3,605,074	+		Sama_3030	0.20	-0.7
3,605,075	-		Sama_3030	0.20	+0.1
3,605,075	-		Sama_3030	0.20	-0.9
3,605,075	-		Sama_3030	0.20	+0.3
3,605,107	+		Sama_3030	0.23	+0.0
3,605,107	+		Sama_3030	0.23	-0.5
3,605,198	-		Sama_3030	0.29	+0.3
3,605,236	-		Sama_3030	0.31	+0.2
3,605,258	+		Sama_3030	0.33	-1.4
3,605,258	+		Sama_3030	0.33	-1.4
3,605,259	-		Sama_3030	0.33	+2.5
3,605,259	-		Sama_3030	0.33	-1.0
3,605,259	-		Sama_3030	0.33	-2.5
3,605,265	+		Sama_3030	0.33	-1.4
3,605,265	+		Sama_3030	0.33	-1.3
3,605,265	+		Sama_3030	0.33	-0.7
3,605,265	+		Sama_3030	0.33	-1.3
3,605,265	+		Sama_3030	0.33	+2.5
3,605,265	+		Sama_3030	0.33	-0.5
3,605,265	+		Sama_3030	0.33	+0.3
3,605,265	+		Sama_3030	0.33	-1.6
3,605,265	+		Sama_3030	0.33	-0.6
3,605,265	+		Sama_3030	0.33	+0.2
3,605,265	+		Sama_3030	0.33	+1.3
3,605,265	+		Sama_3030	0.33	+0.2
3,605,266	-		Sama_3030	0.33	-0.1
3,605,266	-		Sama_3030	0.33	-0.2
3,605,266	-		Sama_3030	0.33	+0.1
3,605,266	-		Sama_3030	0.33	-0.6
3,605,266	-		Sama_3030	0.33	+1.9
3,605,266	-		Sama_3030	0.33	-0.2
3,605,266	-		Sama_3030	0.33	+1.1
3,605,266	-		Sama_3030	0.33	+1.0
3,605,266	-		Sama_3030	0.33	+0.9
3,605,266	-		Sama_3030	0.33	+0.7
3,605,266	-		Sama_3030	0.33	+0.6
3,605,266	-		Sama_3030	0.33	+1.1
3,605,266	-		Sama_3030	0.33	+1.2
3,605,266	-		Sama_3030	0.33	-0.7
3,605,266	-		Sama_3030	0.33	+0.3
3,605,268	-		Sama_3030	0.33	-0.4
3,605,268	-		Sama_3030	0.33	-0.8
3,605,333	+		Sama_3030	0.38	-0.7
3,605,333	+		Sama_3030	0.38	-0.8
3,605,333	+		Sama_3030	0.38	+0.1
3,605,333	+		Sama_3030	0.38	-0.9
3,605,333	+		Sama_3030	0.38	-0.9
3,605,333	+		Sama_3030	0.38	+0.3
3,605,333	+		Sama_3030	0.38	-0.9
3,605,333	+		Sama_3030	0.38	+1.3
3,605,333	+		Sama_3030	0.38	-0.5
3,605,333	+		Sama_3030	0.38	+0.5
3,605,333	+		Sama_3030	0.38	+1.5
3,605,333	+		Sama_3030	0.38	+1.2
3,605,334	-		Sama_3030	0.38	+0.5
3,605,334	-		Sama_3030	0.38	-0.2
3,605,334	-		Sama_3030	0.38	-2.1
3,605,334	-		Sama_3030	0.38	+0.9
3,605,334	-		Sama_3030	0.38	-0.7
3,605,334	-		Sama_3030	0.38	-0.2
3,605,334	-		Sama_3030	0.38	-0.9
3,605,334	-		Sama_3030	0.38	-0.4
3,605,492	+		Sama_3030	0.48	-1.2
3,605,492	+		Sama_3030	0.48	+0.5
3,605,492	+		Sama_3030	0.48	-1.8
3,605,492	+		Sama_3030	0.48	+2.5
3,605,492	+		Sama_3030	0.48	-1.6
3,605,492	+		Sama_3030	0.48	+0.1
3,605,492	+		Sama_3030	0.48	+0.6
3,605,492	+		Sama_3030	0.48	+0.7
3,605,492	+		Sama_3030	0.48	+0.1
3,605,492	+		Sama_3030	0.48	+0.7
3,605,492	+		Sama_3030	0.48	+0.9
3,605,492	+		Sama_3030	0.48	-0.8
3,605,493	-		Sama_3030	0.48	-2.1
3,605,493	-		Sama_3030	0.48	+0.4
3,605,493	-		Sama_3030	0.48	+0.6
3,605,493	-		Sama_3030	0.48	+0.8
3,605,493	-		Sama_3030	0.48	+1.0
3,605,493	-		Sama_3030	0.48	+0.4
3,605,493	-		Sama_3030	0.48	-0.6
3,605,493	-		Sama_3030	0.48	-0.7
3,605,493	-		Sama_3030	0.48	-0.5
3,605,493	-		Sama_3030	0.48	+0.3
3,605,493	-		Sama_3030	0.48	+0.2
3,605,493	-		Sama_3030	0.48	-0.9
3,605,493	-		Sama_3030	0.48	-0.3
3,605,493	-		Sama_3030	0.48	+1.1
3,605,493	-		Sama_3030	0.48	-0.0
3,605,512	-		Sama_3030	0.50	-0.7
3,605,574	-		Sama_3030	0.54	-0.3
3,605,574	-		Sama_3030	0.54	-0.9
3,605,626	-		Sama_3030	0.57	-0.5
3,605,679	+		Sama_3030	0.61	-1.8
3,605,679	+		Sama_3030	0.61	-0.1
3,605,680	-		Sama_3030	0.61	-0.9
3,605,680	-		Sama_3030	0.61	+0.8
3,605,680	-		Sama_3030	0.61	-0.4