Strain Fitness in Shewanella amazonensis SB2B around Sama_2416

Experiment: sodium fluoride 50 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	sodium fluoride 50 mM
2,904,917	+		Sama_2415	0.77	-0.7
2,904,917	+		Sama_2415	0.77	+2.7
2,904,917	+		Sama_2415	0.77	+0.7
2,904,918	-		Sama_2415	0.77	+0.3
2,904,918	-		Sama_2415	0.77	-1.3
2,904,918	-		Sama_2415	0.77	-1.1
2,904,918	-		Sama_2415	0.77	-0.2
2,904,918	-		Sama_2415	0.77	-0.5
2,904,963	-		Sama_2415	0.78	+0.1
2,904,970	-		Sama_2415	0.78	-1.1
2,904,998	+		Sama_2415	0.79	-2.0
2,904,999	-		Sama_2415	0.79	+2.6
2,904,999	-		Sama_2415	0.79	-0.3
2,905,071	+		Sama_2415	0.82	-1.2
2,905,088	+		Sama_2415	0.82	-1.1
2,905,089	-		Sama_2415	0.82	+0.7
2,905,089	-		Sama_2415	0.82	+1.1
2,905,122	-		Sama_2415	0.83	-1.1
2,905,169	+		Sama_2415	0.85	-0.4
2,905,170	-		Sama_2415	0.85	+0.3
2,905,170	-		Sama_2415	0.85	-0.9
2,905,175	+		Sama_2415	0.85	-0.8
2,905,176	-		Sama_2415	0.85	-0.6
2,905,176	-		Sama_2415	0.85	+0.9
2,905,176	-		Sama_2415	0.85	+0.5
2,905,176	-		Sama_2415	0.85	-2.1
2,905,176	-		Sama_2415	0.85	-0.5
2,905,272	-		Sama_2415	0.88	-0.2
2,905,272	-		Sama_2415	0.88	+0.4
2,905,304	+		Sama_2415	0.89	-2.2
2,905,304	+		Sama_2415	0.89	-0.7
2,905,304	+		Sama_2415	0.89	-1.9
2,905,304	+		Sama_2415	0.89	-0.1
2,905,304	+		Sama_2415	0.89	-1.4
2,905,304	+		Sama_2415	0.89	-1.7
2,905,305	-		Sama_2415	0.89	+0.5
2,905,305	-		Sama_2415	0.89	-1.8
2,905,305	-		Sama_2415	0.89	-0.1
2,905,305	-		Sama_2415	0.89	-1.4
2,905,305	-		Sama_2415	0.89	+1.3
2,905,337	-		Sama_2415	0.90	+1.3
2,905,337	-		Sama_2415	0.90	-2.1
2,905,337	-		Sama_2415	0.90	+0.1
2,905,400	+				+0.5
2,905,400	+				-0.5
2,905,400	+				+0.9
2,905,400	+				-0.7
2,905,400	+				+0.3
2,905,400	+				+0.8
2,905,400	+				-0.1
2,905,400	+				+0.7
2,905,401	-				-1.5
2,905,401	-				+0.3
2,905,401	-				-0.2
2,905,401	-				+0.8
2,905,401	-				+0.3
2,905,401	-				+0.3
2,905,401	-				+0.7
2,905,401	-				-0.3
2,905,421	+				-1.9
2,905,422	-				+0.5
2,905,422	-				-0.6
2,905,528	+				-1.2
2,905,555	+				-1.7
2,905,555	+				+0.5
2,905,556	-				-0.6
2,905,563	+				+0.9
2,905,564	-				-0.8
2,905,564	-				+0.4
2,905,590	-				-0.2
2,905,593	-				-1.8
2,905,621	+				-1.1
2,905,621	+				-0.9
2,905,622	-				-1.4
2,905,622	-				-1.6
2,905,695	-				+1.3
2,905,747	+				-1.9
2,905,748	-				+0.3
2,905,748	-				-1.0
2,905,748	-				-0.2
2,905,779	-				-0.2
2,905,857	-				-1.3
2,905,999	-				-0.2
2,906,020	+				-1.2
2,906,020	+				+0.4
2,906,021	-				-0.1
2,906,021	-				+0.0
2,906,057	+				+1.1
2,906,057	+				-1.4
2,906,057	+				-0.1
2,906,058	-				+2.1
2,906,104	-		Sama_2416	0.12	-1.1
2,906,225	-		Sama_2416	0.18	-0.7
2,906,232	+		Sama_2416	0.19	+0.3
2,906,279	+		Sama_2416	0.21	-0.5
2,906,343	+		Sama_2416	0.24	-0.5
2,906,344	-		Sama_2416	0.24	-1.6
2,906,366	+		Sama_2416	0.26	-0.9
2,906,367	-		Sama_2416	0.26	-0.6
2,906,367	-		Sama_2416	0.26	-1.5
2,906,400	+		Sama_2416	0.27	+0.8
2,906,400	+		Sama_2416	0.27	-1.0
2,906,401	-		Sama_2416	0.28	+1.3
2,906,444	+		Sama_2416	0.30	+0.7
2,906,444	+		Sama_2416	0.30	-0.1
2,906,444	+		Sama_2416	0.30	+0.5
2,906,444	+		Sama_2416	0.30	+0.2
2,906,445	-		Sama_2416	0.30	-0.3
2,906,446	+		Sama_2416	0.30	+0.7
2,906,446	+		Sama_2416	0.30	+0.8
2,906,446	+		Sama_2416	0.30	+0.0
2,906,446	+		Sama_2416	0.30	-0.6
2,906,447	-		Sama_2416	0.30	-0.1
2,906,447	-		Sama_2416	0.30	-0.3
2,906,447	-		Sama_2416	0.30	-2.5
2,906,447	-		Sama_2416	0.30	-0.2
2,906,447	-		Sama_2416	0.30	-1.2
2,906,447	-		Sama_2416	0.30	+0.3
2,906,447	-		Sama_2416	0.30	+1.3
2,906,469	-		Sama_2416	0.31	+0.7
2,906,506	-		Sama_2416	0.33	+0.6
2,906,526	+		Sama_2416	0.34	-1.4
2,906,526	+		Sama_2416	0.34	-0.4
2,906,526	+		Sama_2416	0.34	+0.8
2,906,526	+		Sama_2416	0.34	-1.4
2,906,526	+		Sama_2416	0.34	-0.3
2,906,526	+		Sama_2416	0.34	-0.5
2,906,526	+		Sama_2416	0.34	+0.3
2,906,527	-		Sama_2416	0.34	+1.5
2,906,527	-		Sama_2416	0.34	+0.5
2,906,527	-		Sama_2416	0.34	-1.3
2,906,527	-		Sama_2416	0.34	+2.0
2,906,527	-		Sama_2416	0.34	-1.4
2,906,527	-		Sama_2416	0.34	-1.2
2,906,527	-		Sama_2416	0.34	-0.3
2,906,527	-		Sama_2416	0.34	-1.6
2,906,527	-		Sama_2416	0.34	-1.4
2,906,527	-		Sama_2416	0.34	+1.6
2,906,528	+		Sama_2416	0.34	+0.3
2,906,528	+		Sama_2416	0.34	+0.2
2,906,528	+		Sama_2416	0.34	+0.7
2,906,528	+		Sama_2416	0.34	+0.9
2,906,528	+		Sama_2416	0.34	+0.6
2,906,528	+		Sama_2416	0.34	-0.4
2,906,528	+		Sama_2416	0.34	-0.6
2,906,529	-		Sama_2416	0.34	-0.7
2,906,529	-		Sama_2416	0.34	+0.3
2,906,529	-		Sama_2416	0.34	+0.1
2,906,529	-		Sama_2416	0.34	-0.7
2,906,529	-		Sama_2416	0.34	-1.1
2,906,529	-		Sama_2416	0.34	+0.9
2,906,529	-		Sama_2416	0.34	+1.3
2,906,529	-		Sama_2416	0.34	+0.6
2,906,529	-		Sama_2416	0.34	-1.0
2,906,541	-		Sama_2416	0.35	-1.8
2,906,541	-		Sama_2416	0.35	-0.1
2,906,541	-		Sama_2416	0.35	+0.9
2,906,541	-		Sama_2416	0.35	-0.3
2,906,548	+		Sama_2416	0.35	-1.3
2,906,548	+		Sama_2416	0.35	+0.5
2,906,548	+		Sama_2416	0.35	-0.1
2,906,549	-		Sama_2416	0.35	-1.1
2,906,567	+		Sama_2416	0.36	-0.1
2,906,568	-		Sama_2416	0.36	-0.1
2,906,568	-		Sama_2416	0.36	+0.1
2,906,656	-		Sama_2416	0.41	-1.5
2,906,656	-		Sama_2416	0.41	-0.9
2,906,729	+		Sama_2416	0.45	-0.3
2,906,730	-		Sama_2416	0.45	+1.3
2,906,730	-		Sama_2416	0.45	+0.4
2,906,730	-		Sama_2416	0.45	-0.6
2,906,783	+		Sama_2416	0.48	-0.2
2,906,783	+		Sama_2416	0.48	+0.0
2,906,783	+		Sama_2416	0.48	+1.3
2,906,783	+		Sama_2416	0.48	-0.6
2,906,784	-		Sama_2416	0.48	+0.1
2,906,784	-		Sama_2416	0.48	-2.5
2,906,784	-		Sama_2416	0.48	-2.3
2,906,789	+		Sama_2416	0.48	-0.7
2,906,790	-		Sama_2416	0.48	-1.5
2,906,790	-		Sama_2416	0.48	+0.5
2,906,790	-		Sama_2416	0.48	-0.1
2,906,790	-		Sama_2416	0.48	+0.3
2,906,790	-		Sama_2416	0.48	-1.3
2,906,832	+		Sama_2416	0.51	+0.4
2,906,838	+		Sama_2416	0.51	+0.3
2,906,862	+		Sama_2416	0.52	-2.3
2,906,874	-		Sama_2416	0.53	-1.7
2,906,895	+		Sama_2416	0.54	-0.4
2,906,895	+		Sama_2416	0.54	-1.7
2,906,970	+		Sama_2416	0.58	+0.1
2,906,970	+		Sama_2416	0.58	-0.3
2,906,970	+		Sama_2416	0.58	-1.5
2,906,971	-		Sama_2416	0.58	-0.7
2,906,971	-		Sama_2416	0.58	-1.1
2,906,971	-		Sama_2416	0.58	-0.9
2,906,971	-		Sama_2416	0.58	+1.0
2,906,971	-		Sama_2416	0.58	-1.1
2,906,971	-		Sama_2416	0.58	+0.5
2,906,971	-		Sama_2416	0.58	+0.3
2,906,971	-		Sama_2416	0.58	-0.7
2,906,971	-		Sama_2416	0.58	+1.5
2,906,972	+		Sama_2416	0.58	+0.1
2,906,972	+		Sama_2416	0.58	-1.7
2,906,972	+		Sama_2416	0.58	-0.5
2,906,972	+		Sama_2416	0.58	-1.1
2,906,972	+		Sama_2416	0.58	+0.6
2,906,972	+		Sama_2416	0.58	+0.0
2,906,972	+		Sama_2416	0.58	-0.4
2,906,972	+		Sama_2416	0.58	+1.5
2,906,972	+		Sama_2416	0.58	-2.8
2,906,972	+		Sama_2416	0.58	-0.8
2,906,973	-		Sama_2416	0.58	-0.1
2,906,973	-		Sama_2416	0.58	-0.1
2,906,973	-		Sama_2416	0.58	-1.3
2,906,973	-		Sama_2416	0.58	-0.2
2,906,973	-		Sama_2416	0.58	+1.1
2,906,973	-		Sama_2416	0.58	-0.5
2,906,973	-		Sama_2416	0.58	-0.7
2,906,973	-		Sama_2416	0.58	-0.2
2,906,973	-		Sama_2416	0.58	-1.8
2,906,973	-		Sama_2416	0.58	+0.9
2,906,973	-		Sama_2416	0.58	+0.8
2,906,979	-		Sama_2416	0.58	-0.4
2,907,051	+		Sama_2416	0.62	-0.2
2,907,062	+		Sama_2416	0.63	-0.9
2,907,062	+		Sama_2416	0.63	-0.5
2,907,062	+		Sama_2416	0.63	+0.3
2,907,062	+		Sama_2416	0.63	-0.1
2,907,062	+		Sama_2416	0.63	-2.1
2,907,062	+		Sama_2416	0.63	-0.1
2,907,062	+		Sama_2416	0.63	-1.3
2,907,063	-		Sama_2416	0.63	-1.2
2,907,063	-		Sama_2416	0.63	-0.2
2,907,063	-		Sama_2416	0.63	+0.1
2,907,063	-		Sama_2416	0.63	+0.0
2,907,092	+		Sama_2416	0.64	-0.4
2,907,093	-		Sama_2416	0.64	-0.1
2,907,093	-		Sama_2416	0.64	-0.3
2,907,130	+		Sama_2416	0.66	+0.5
2,907,130	+		Sama_2416	0.66	-0.5
2,907,131	-		Sama_2416	0.66	-0.9
2,907,131	-		Sama_2416	0.66	-0.1
2,907,167	+		Sama_2416	0.68	-0.7
2,907,167	+		Sama_2416	0.68	+0.3
2,907,168	-		Sama_2416	0.68	-0.9
2,907,168	-		Sama_2416	0.68	-0.1
2,907,168	-		Sama_2416	0.68	-0.2
2,907,284	+		Sama_2416	0.75	-0.1
2,907,285	-		Sama_2416	0.75	-0.9
2,907,285	-		Sama_2416	0.75	-1.2
2,907,285	-		Sama_2416	0.75	-1.6
2,907,285	-		Sama_2416	0.75	+0.3
2,907,288	+		Sama_2416	0.75	-0.3
2,907,288	+		Sama_2416	0.75	-0.1
2,907,289	-		Sama_2416	0.75	-0.2
2,907,311	+		Sama_2416	0.76	-0.2
2,907,312	-		Sama_2416	0.76	+1.1
2,907,312	-		Sama_2416	0.76	-1.6
2,907,312	-		Sama_2416	0.76	-0.1
2,907,312	-		Sama_2416	0.76	-2.3
2,907,331	-		Sama_2416	0.77	+0.9
2,907,363	-		Sama_2416	0.79	-0.5
2,907,363	-		Sama_2416	0.79	+0.4
2,907,363	-		Sama_2416	0.79	-1.5
2,907,363	-		Sama_2416	0.79	-1.8
2,907,363	-		Sama_2416	0.79	-1.5
2,907,372	-		Sama_2416	0.79	-0.1
2,907,372	-		Sama_2416	0.79	-1.5
2,907,463	+		Sama_2416	0.84	-0.2
2,907,463	+		Sama_2416	0.84	-0.9
2,907,463	+		Sama_2416	0.84	+1.6
2,907,464	-		Sama_2416	0.84	-1.3
2,907,464	-		Sama_2416	0.84	+1.8
2,907,464	-		Sama_2416	0.84	+1.1
2,907,464	-		Sama_2416	0.84	-0.1
2,907,464	-		Sama_2416	0.84	-1.2
2,907,465	-		Sama_2416	0.84	-0.5
2,907,509	+		Sama_2416	0.87	-1.0
2,907,510	-		Sama_2416	0.87	-0.4
2,907,513	+		Sama_2416	0.87	-0.7
2,907,514	-		Sama_2416	0.87	-2.3
2,907,514	-		Sama_2416	0.87	-0.5
2,907,574	+				-1.4
2,907,624	-				-0.1
2,907,671	-				-0.3
2,907,683	-				+0.5
2,907,709	-				-2.0
2,907,710	+				+0.0
2,907,710	+				-0.9
2,907,710	+				+0.5
2,907,710	+				-0.9
2,907,711	-				+0.9
2,907,711	-				-2.0
2,907,711	-				+0.9
2,907,711	-				+0.7
2,907,711	-				+0.8
2,907,711	-				+0.3
2,907,711	-				-0.5
2,907,711	-				+1.3
2,907,711	-				-0.1
2,907,711	-				-1.5
2,907,711	-				-0.5
2,907,711	-				+0.3
2,907,711	-				-0.5
2,907,711	-				-0.8
2,907,714	+				-0.6
2,907,714	+				-2.1
2,907,715	-				-0.9
2,907,715	-				+0.3
2,907,715	-				+1.3
2,907,715	-				+0.5
2,907,715	-				-0.1
2,907,730	-				+1.8
2,907,743	+				+1.8
2,907,743	+				+2.0
2,907,744	-				-0.7
2,907,744	-				-0.9
2,907,744	-				-0.5
2,907,744	-				+1.3
2,907,745	+				-2.7
2,907,746	-				-0.2
2,907,746	-				+0.8
2,907,850	-				-1.5
2,907,880	-				+0.1
2,907,928	+				+0.2
2,907,929	-				-1.6
2,908,019	+				-0.9
2,908,038	+				-0.9
2,908,039	-				-0.5
2,908,044	+				+0.3
2,908,045	-				+1.5
2,908,165	+		Sama_2417	0.15	-0.5
2,908,165	+		Sama_2417	0.15	-2.1
2,908,165	+		Sama_2417	0.15	+0.9
2,908,165	+		Sama_2417	0.15	-1.1
2,908,166	-		Sama_2417	0.15	+0.9
2,908,166	-		Sama_2417	0.15	+0.7
2,908,172	+		Sama_2417	0.16	+1.7
2,908,251	-		Sama_2417	0.19	+0.2
2,908,251	-		Sama_2417	0.19	-0.9
2,908,267	+		Sama_2417	0.20	+0.5
2,908,268	-		Sama_2417	0.20	-1.6
2,908,268	-		Sama_2417	0.20	-0.8
2,908,339	+		Sama_2417	0.23	-0.1
2,908,339	+		Sama_2417	0.23	+1.4
2,908,339	+		Sama_2417	0.23	-0.5
2,908,339	+		Sama_2417	0.23	-0.8
2,908,339	+		Sama_2417	0.23	+0.3
2,908,340	-		Sama_2417	0.23	-0.7
2,908,340	-		Sama_2417	0.23	+0.0
2,908,340	-		Sama_2417	0.23	-2.2
2,908,340	-		Sama_2417	0.23	-2.3
2,908,343	+		Sama_2417	0.24	+1.3
2,908,343	+		Sama_2417	0.24	-0.5
2,908,343	+		Sama_2417	0.24	-1.1
2,908,343	+		Sama_2417	0.24	+1.1
2,908,343	+		Sama_2417	0.24	+0.3
2,908,343	+		Sama_2417	0.24	-0.7
2,908,343	+		Sama_2417	0.24	-2.6
2,908,343	+		Sama_2417	0.24	-0.4
2,908,343	+		Sama_2417	0.24	-2.2
2,908,343	+		Sama_2417	0.24	-1.5
2,908,344	-		Sama_2417	0.24	-1.4
2,908,344	-		Sama_2417	0.24	-1.1
2,908,344	-		Sama_2417	0.24	-0.2
2,908,344	-		Sama_2417	0.24	-0.3
2,908,344	-		Sama_2417	0.24	+0.3
2,908,344	-		Sama_2417	0.24	+0.5
2,908,344	-		Sama_2417	0.24	+1.3
2,908,365	+		Sama_2417	0.25	-1.1
2,908,366	-		Sama_2417	0.25	-0.7
2,908,407	-		Sama_2417	0.27	+0.8
2,908,407	-		Sama_2417	0.27	+0.1
2,908,407	-		Sama_2417	0.27	+0.3
2,908,425	-		Sama_2417	0.27	+0.1
2,908,425	-		Sama_2417	0.27	-0.5
2,908,425	-		Sama_2417	0.27	-0.7
2,908,425	-		Sama_2417	0.27	-0.5
2,908,432	-		Sama_2417	0.28	+2.5
2,908,460	+		Sama_2417	0.29	-0.4
2,908,460	+		Sama_2417	0.29	-0.0
2,908,460	+		Sama_2417	0.29	+0.2
2,908,460	+		Sama_2417	0.29	+0.7
2,908,460	+		Sama_2417	0.29	+0.9
2,908,460	+		Sama_2417	0.29	+1.0
2,908,460	+		Sama_2417	0.29	+0.5
2,908,461	-		Sama_2417	0.29	-1.3
2,908,463	+		Sama_2417	0.29	-2.0
2,908,464	-		Sama_2417	0.29	-0.4
2,908,464	-		Sama_2417	0.29	-0.4
2,908,502	+		Sama_2417	0.31	+1.3
2,908,502	+		Sama_2417	0.31	+0.8
2,908,503	-		Sama_2417	0.31	-1.2
2,908,503	-		Sama_2417	0.31	-2.3
2,908,584	-		Sama_2417	0.35	-0.6
2,908,584	-		Sama_2417	0.35	+0.2
2,908,584	-		Sama_2417	0.35	-0.5
2,908,584	-		Sama_2417	0.35	+0.9
2,908,593	+		Sama_2417	0.35	-0.9
2,908,654	-		Sama_2417	0.38	+1.5
2,908,711	+		Sama_2417	0.41	-0.9
2,908,711	+		Sama_2417	0.41	+0.1
2,908,711	+		Sama_2417	0.41	-0.2
2,908,712	-		Sama_2417	0.41	-0.9
2,908,739	+		Sama_2417	0.42	-0.1
2,908,739	+		Sama_2417	0.42	+1.3
2,908,740	-		Sama_2417	0.42	-0.3
2,908,740	-		Sama_2417	0.42	-0.1
2,908,742	+		Sama_2417	0.42	-1.5
2,908,742	+		Sama_2417	0.42	+0.3
2,908,743	-		Sama_2417	0.42	-1.9
2,908,743	-		Sama_2417	0.42	-2.2
2,908,743	-		Sama_2417	0.42	-0.5