Strain Fitness in Marinobacter adhaerens HP15 around HP15_1483

Experiment: m.b. 1-ethyl-3-methylimidazolium lysine 5 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_1482 and HP15_1483 are separated by 85 nucleotidesHP15_1483 and HP15_1484 are separated by 593 nucleotides HP15_1482: HP15_1482 - preprotein translocase subunit SecF, at 1,558,681 to 1,559,634 _1482 HP15_1483: HP15_1483 - 1,6-bisphosphatase and related enzyme of inositol monophosphatase-like protein, at 1,559,720 to 1,560,109 _1483 HP15_1484: HP15_1484 - RNA methyltransferase, TrmH family, group 1, at 1,560,703 to 1,561,566 _1484 Position (kb) 1559 1560 1561Strain fitness (log2 ratio) -1 0 1at 1559.626 kb on - strandat 1560.619 kb on + strandat 1560.620 kb on + strandat 1560.638 kb on - strandat 1560.761 kb on - strandat 1561.039 kb on + strand, within HP15_1484at 1561.083 kb on - strand, within HP15_1484at 1561.096 kb on + strand, within HP15_1484

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. 1-ethyl-3-methylimidazolium lysine 5 mM
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1,559,626 - -0.7
1,560,619 + -0.4
1,560,620 + +0.4
1,560,638 - +0.1
1,560,761 - +0.5
1,561,039 + HP15_1484 0.39 -0.5
1,561,083 - HP15_1484 0.44 +1.0
1,561,096 + HP15_1484 0.45 -0.1

Or see this region's nucleotide sequence