Strain Fitness in Marinobacter adhaerens HP15 around HP15_614

Experiment: m.b. acetate 175 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_613 and HP15_614 are separated by 114 nucleotidesHP15_614 and HP15_615 are separated by 89 nucleotides HP15_613: HP15_613 - methyl-accepting chemotaxis sensory transducer, at 634,378 to 636,504 _613 HP15_614: HP15_614 - protein containing glutaredoxin domain, at 636,619 to 636,879 _614 HP15_615: HP15_615 - 6-phosphofructokinase, at 636,969 to 638,231 _615 Position (kb) 636 637Strain fitness (log2 ratio) -1 0 1 2at 635.769 kb on - strand, within HP15_613at 635.769 kb on - strand, within HP15_613at 635.863 kb on + strand, within HP15_613at 635.887 kb on - strand, within HP15_613at 635.946 kb on + strand, within HP15_613at 636.115 kb on + strand, within HP15_613at 636.122 kb on - strand, within HP15_613at 636.187 kb on + strand, within HP15_613at 636.442 kb on + strandat 636.456 kb on - strandat 636.461 kb on - strandat 636.500 kb on - strandat 636.702 kb on + strand, within HP15_614at 636.777 kb on + strand, within HP15_614at 636.860 kb on + strandat 636.912 kb on + strandat 636.928 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. acetate 175 mM
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635,769 - HP15_613 0.65 -0.2
635,769 - HP15_613 0.65 -0.4
635,863 + HP15_613 0.70 +1.4
635,887 - HP15_613 0.71 -0.4
635,946 + HP15_613 0.74 +0.3
636,115 + HP15_613 0.82 +0.3
636,122 - HP15_613 0.82 -0.2
636,187 + HP15_613 0.85 +0.3
636,442 + +0.1
636,456 - +0.0
636,461 - +0.4
636,500 - -0.2
636,702 + HP15_614 0.32 -1.4
636,777 + HP15_614 0.61 +0.2
636,860 + -0.7
636,912 + +2.0
636,928 - -0.7

Or see this region's nucleotide sequence