Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_0631

Experiment: Neomycin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Neomycin 0.004 mg/ml
682,171	+		Psest_0629	0.89	-0.5
682,171	+		Psest_0629	0.89	+0.2
682,171	+		Psest_0629	0.89	+0.2
682,171	+		Psest_0629	0.89	+0.3
682,172	-		Psest_0629	0.89	+1.2
682,335	+				-0.0
682,335	+				-0.8
682,335	+				+0.8
682,336	-				-0.4
682,336	-				-0.8
682,340	-				+0.3
682,361	+				-0.2
682,361	+				+0.2
682,368	+				+0.5
682,369	-				-1.8
682,369	-				+0.6
682,369	-				-0.9
682,369	-				+1.2
682,369	-				+0.4
682,372	+				+1.2
682,372	+				-0.0
682,378	-				-1.1
682,416	+				-0.1
682,422	+				+1.2
682,422	+				+0.6
682,422	+				-0.1
682,422	+				-0.4
682,423	-				-0.6
682,423	-				-0.0
682,423	-				+0.1
682,428	+				+0.7
682,428	+				-1.6
682,428	+				-0.7
682,429	-				+0.1
682,429	-				+0.4
682,429	-				+0.2
682,542	-				-0.8
682,542	-				-0.6
682,542	-				-1.4
682,544	+				-0.2
682,545	-				-1.8
682,545	-				+0.2
682,561	+				+0.3
682,561	+				-1.3
682,579	-				-1.4
682,619	+				+0.6
682,619	+				-1.1
682,619	+				+0.2
682,619	+				-1.0
682,619	+				-2.0
682,619	+				-1.8
682,619	+				-1.0
682,619	+				-0.6
682,620	-				-0.5
682,620	-				+1.2
682,678	+				+0.2
682,678	+				-0.8
682,678	+				-1.0
682,678	+				-2.0
682,678	+				+0.0
682,678	+				-0.7
682,678	+				-0.4
682,678	+				+1.2
682,678	+				+1.2
682,678	+				-1.5
682,678	+				-2.4
682,678	+				-1.1
682,678	+				-0.5
682,678	+				+2.2
682,678	+				+0.6
682,678	+				+0.4
682,678	+				-0.8
682,678	+				-0.3
682,678	+				+0.4
682,679	-				-0.2
682,679	-				+1.2
682,679	-				-1.1
682,679	-				-1.2
682,679	-				+1.2
682,679	-				+1.2
682,679	-				-0.2
682,679	-				+0.5
682,679	-				-0.8
682,679	-				-2.0
682,679	-				+1.5
682,679	-				-1.6
682,679	-				-0.0
682,679	-				+1.2
682,679	-				+2.2
682,679	-				+1.8
682,679	-				-1.4
682,679	-				-1.1
682,679	-				-0.3
682,679	-				-0.8
682,788	+				-0.9
682,788	+				-0.2
682,788	+				-1.4
682,789	-				-0.7
683,146	+		Psest_0631	0.13	-0.7
683,146	+		Psest_0631	0.13	-0.2
683,147	-		Psest_0631	0.13	-0.7
683,148	+		Psest_0631	0.13	+0.2
683,226	-		Psest_0631	0.18	-0.3
683,558	-		Psest_0631	0.41	-1.1
683,611	+		Psest_0631	0.45	-0.9
683,670	-		Psest_0631	0.49	-0.7
683,674	-		Psest_0631	0.49	+1.2
683,674	-		Psest_0631	0.49	+0.2
683,810	+		Psest_0631	0.58	-1.3
683,811	-		Psest_0631	0.58	-1.3
683,811	-		Psest_0631	0.58	+0.6
683,811	-		Psest_0631	0.58	-0.6
683,856	+		Psest_0631	0.61	-1.6
683,857	-		Psest_0631	0.61	-1.8
684,091	-		Psest_0631	0.77	-1.4
684,134	+		Psest_0631	0.80	-0.3
684,135	-		Psest_0631	0.80	-0.8
684,169	-		Psest_0631	0.82	+0.6
684,190	+		Psest_0631	0.84	-1.1
684,228	+		Psest_0631	0.86	-0.6
684,261	+		Psest_0631	0.89	+0.2
684,261	+		Psest_0631	0.89	-0.4
684,261	+		Psest_0631	0.89	-0.6
684,261	+		Psest_0631	0.89	-0.8
684,261	+		Psest_0631	0.89	+0.3
684,274	+		Psest_0631	0.89	-2.1
684,275	-		Psest_0631	0.90	+0.8
684,350	+				-1.0
684,368	-				-1.2
684,390	-				-0.1
684,390	-				+0.8
684,398	+				-1.4
684,521	-		Psest_0632	0.16	-0.1
684,558	-		Psest_0632	0.22	-0.4
684,577	+		Psest_0632	0.25	-1.4
684,578	-		Psest_0632	0.25	+1.2
684,675	-		Psest_0632	0.41	+0.5
684,675	-		Psest_0632	0.41	-1.3
684,854	+		Psest_0632	0.70	-0.6
684,921	-		Psest_0632	0.81	+0.2
685,069	+				-0.8
685,180	+				-0.1
685,206	-				+0.2
685,215	-				-0.7
685,310	-		Psest_0633	0.13	+0.2