Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_4338

Experiment: Neomycin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Neomycin 0.004 mg/ml
4,537,601	+		Psest_4337	0.64	-0.3
4,537,601	+		Psest_4337	0.64	+0.2
4,537,602	-		Psest_4337	0.64	-0.3
4,537,602	-		Psest_4337	0.64	+2.1
4,537,602	-		Psest_4337	0.64	-0.1
4,537,602	-		Psest_4337	0.64	+1.1
4,537,700	+		Psest_4337	0.68	+0.7
4,537,700	+		Psest_4337	0.68	+1.1
4,537,748	+		Psest_4337	0.70	+0.6
4,537,748	+		Psest_4337	0.70	+1.4
4,537,748	+		Psest_4337	0.70	+0.5
4,537,748	+		Psest_4337	0.70	+0.9
4,537,748	+		Psest_4337	0.70	+0.3
4,537,749	-		Psest_4337	0.70	+1.4
4,537,749	-		Psest_4337	0.70	-0.8
4,537,749	-		Psest_4337	0.70	-0.8
4,537,749	-		Psest_4337	0.70	-0.9
4,537,772	+		Psest_4337	0.71	-0.2
4,537,772	+		Psest_4337	0.71	+0.5
4,537,772	+		Psest_4337	0.71	+0.3
4,537,772	+		Psest_4337	0.71	+0.8
4,537,772	+		Psest_4337	0.71	+0.6
4,537,773	-		Psest_4337	0.71	+0.1
4,537,773	-		Psest_4337	0.71	+0.4
4,537,773	-		Psest_4337	0.71	-0.3
4,537,773	-		Psest_4337	0.71	-0.4
4,537,812	-		Psest_4337	0.73	+0.2
4,537,812	-		Psest_4337	0.73	+0.0
4,537,812	-		Psest_4337	0.73	-1.2
4,537,856	+		Psest_4337	0.75	+0.2
4,537,856	+		Psest_4337	0.75	+1.7
4,537,856	+		Psest_4337	0.75	-1.2
4,537,856	+		Psest_4337	0.75	-0.2
4,537,857	-		Psest_4337	0.75	-0.1
4,537,857	-		Psest_4337	0.75	-0.5
4,537,857	-		Psest_4337	0.75	+1.1
4,537,857	-		Psest_4337	0.75	-0.3
4,537,857	-		Psest_4337	0.75	-0.1
4,537,857	-		Psest_4337	0.75	+0.1
4,537,908	-		Psest_4337	0.77	+0.3
4,538,039	+		Psest_4337	0.82	-0.1
4,538,039	+		Psest_4337	0.82	-0.2
4,538,040	-		Psest_4337	0.82	+0.8
4,538,040	-		Psest_4337	0.82	+0.7
4,538,141	+		Psest_4337	0.86	-0.4
4,538,141	+		Psest_4337	0.86	-0.6
4,538,142	-		Psest_4337	0.86	-0.4
4,538,142	-		Psest_4337	0.86	-1.2
4,538,142	-		Psest_4337	0.86	+2.1
4,538,142	-		Psest_4337	0.86	-0.2
4,538,340	-				-0.2
4,538,340	-				+0.6
4,538,515	+				+0.8
4,538,515	+				+0.6
4,538,515	+				+0.3
4,538,515	+				+0.3
4,538,516	-				-1.4
4,538,516	-				+2.0
4,538,516	-				-1.3
4,538,522	-				-2.4
4,538,522	-				+0.4
4,538,757	+		Psest_4338	0.18	-2.9
4,538,758	-		Psest_4338	0.18	-1.4
4,538,936	+		Psest_4338	0.36	-0.3
4,538,936	+		Psest_4338	0.36	-1.0
4,538,936	+		Psest_4338	0.36	-1.1
4,538,936	+		Psest_4338	0.36	+0.3
4,538,937	-		Psest_4338	0.36	-0.7
4,538,937	-		Psest_4338	0.36	+0.1
4,538,937	-		Psest_4338	0.36	-1.5
4,538,937	-		Psest_4338	0.36	-0.0
4,538,937	-		Psest_4338	0.36	-0.8
4,538,937	-		Psest_4338	0.36	-1.1
4,538,937	-		Psest_4338	0.36	-0.7
4,538,937	-		Psest_4338	0.36	-3.6
4,538,937	-		Psest_4338	0.36	-0.9
4,538,964	-		Psest_4338	0.39	-1.4
4,538,964	-		Psest_4338	0.39	+1.7
4,538,964	-		Psest_4338	0.39	-3.1
4,538,964	-		Psest_4338	0.39	-0.9
4,539,105	+		Psest_4338	0.54	-1.7
4,539,106	-		Psest_4338	0.54	-1.7
4,539,537	+				-0.1
4,539,599	+				+0.5
4,539,599	+				-0.3
4,539,599	+				-0.7
4,539,599	+				+0.4
4,539,599	+				+0.1
4,539,599	+				-0.2
4,539,599	+				+0.7
4,539,599	+				+0.9
4,539,599	+				-0.8
4,539,599	+				-0.8
4,539,599	+				-0.4
4,539,599	+				+2.1
4,539,599	+				-1.5
4,539,599	+				-0.5
4,539,600	-				+1.1
4,539,600	-				+0.9
4,539,600	-				+0.6
4,539,600	-				+0.4
4,539,600	-				+1.0
4,539,600	-				+0.7
4,539,600	-				+0.8
4,539,600	-				+1.9
4,539,600	-				+0.7
4,539,600	-				-1.5
4,539,600	-				+2.1
4,539,600	-				-0.4
4,539,600	-				+0.5
4,539,600	-				+0.8
4,539,600	-				+1.1
4,539,650	+		Psest_4339	0.19	+1.1
4,539,650	+		Psest_4339	0.19	-0.1
4,539,650	+		Psest_4339	0.19	-2.2
4,539,650	+		Psest_4339	0.19	-0.1
4,539,650	+		Psest_4339	0.19	-0.4
4,539,650	+		Psest_4339	0.19	+1.6
4,539,651	-		Psest_4339	0.20	+0.9
4,539,651	-		Psest_4339	0.20	+0.7
4,539,809	+		Psest_4339	0.50	-1.5
4,539,809	+		Psest_4339	0.50	-0.3
4,539,810	-		Psest_4339	0.50	+1.2
4,539,875	+		Psest_4339	0.63	-0.6
4,539,875	+		Psest_4339	0.63	-1.0
4,539,936	+		Psest_4339	0.75	+0.7
4,539,936	+		Psest_4339	0.75	-0.0
4,539,937	-		Psest_4339	0.75	-0.4
4,539,937	-		Psest_4339	0.75	+0.2
4,540,020	-				+1.7
4,540,020	-				+0.5
4,540,050	+				-0.2
4,540,050	+				-0.8
4,540,050	+				-0.4
4,540,050	+				-0.5
4,540,051	-				+1.1
4,540,051	-				+0.5
4,540,453	-		Psest_4340	0.42	-1.7