Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3778

Experiment: Neomycin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Neomycin 0.004 mg/ml
3,945,729	-		Psest_3777	0.58	-0.6
3,945,729	-		Psest_3777	0.58	+0.2
3,945,953	+		Psest_3777	0.72	+0.8
3,946,384	+				-0.8
3,946,385	-				-0.4
3,946,385	-				+0.6
3,946,385	-				-0.4
3,946,385	-				-1.2
3,946,446	-				+0.7
3,946,446	-				+0.4
3,946,446	-				+1.3
3,946,446	-				+1.0
3,946,519	-				+1.7
3,946,519	-				+2.3
3,946,526	+				+1.5
3,946,527	-				+0.1
3,946,527	-				+0.6
3,946,527	-				+0.9
3,946,567	+				-0.2
3,946,568	-				+0.3
3,946,608	+				-0.4
3,948,696	-				-0.2
3,948,754	+				-0.5
3,948,755	-				+1.8
3,948,755	-				+0.4
3,948,883	+		Psest_3779	0.21	+0.4
3,948,883	+		Psest_3779	0.21	-1.6
3,948,884	-		Psest_3779	0.22	-0.6
3,948,884	-		Psest_3779	0.22	-0.1
3,948,907	+		Psest_3779	0.25	-2.3
3,948,907	+		Psest_3779	0.25	+0.1
3,948,907	+		Psest_3779	0.25	-0.2
3,948,926	-		Psest_3779	0.28	-0.6
3,948,926	-		Psest_3779	0.28	+0.3
3,948,985	+		Psest_3779	0.38	+0.5
3,948,985	+		Psest_3779	0.38	-0.0
3,948,985	+		Psest_3779	0.38	-0.1
3,948,985	+		Psest_3779	0.38	+0.0
3,948,986	-		Psest_3779	0.38	-0.2
3,948,986	-		Psest_3779	0.38	-0.3
3,949,007	-		Psest_3779	0.41	-1.1
3,949,007	-		Psest_3779	0.41	-0.4
3,949,144	+		Psest_3779	0.64	-1.2
3,949,144	+		Psest_3779	0.64	+2.2
3,949,144	+		Psest_3779	0.64	+1.2
3,949,145	-		Psest_3779	0.64	+0.5
3,949,145	-		Psest_3779	0.64	-0.1
3,949,243	+		Psest_3779	0.80	+0.5
3,949,251	-		Psest_3779	0.81	-1.4
3,949,357	+				-0.5
3,949,357	+				-0.4
3,949,357	+				+0.4
3,949,357	+				-0.2
3,949,357	+				+0.2
3,949,358	-				-0.4
3,949,358	-				+0.3
3,949,358	-				-0.8