Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2162

Experiment: Neomycin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Neomycin 0.004 mg/ml
2,313,475	+		Psest_2160	0.89	-1.1
2,313,608	+				-0.0
2,313,615	+				-0.1
2,313,615	+				-1.0
2,313,615	+				+0.9
2,313,615	+				-0.0
2,313,615	+				+0.6
2,313,615	+				+0.1
2,313,615	+				+0.5
2,313,615	+				-0.8
2,313,615	+				-0.5
2,313,615	+				+0.2
2,313,615	+				-0.4
2,313,615	+				+0.7
2,313,615	+				+0.9
2,313,615	+				+0.2
2,313,615	+				+0.0
2,313,615	+				+0.5
2,313,615	+				+0.4
2,313,615	+				-0.2
2,313,615	+				-0.4
2,313,616	-				-1.5
2,313,616	-				+1.6
2,313,616	-				-0.6
2,313,616	-				+0.7
2,313,616	-				+0.1
2,313,616	-				+0.8
2,313,616	-				-0.5
2,313,616	-				-0.1
2,313,616	-				+0.5
2,313,616	-				+0.3
2,313,616	-				+0.2
2,313,616	-				-1.0
2,313,616	-				-0.6
2,313,616	-				+0.1
2,313,616	-				+0.2
2,313,616	-				-0.0
2,313,616	-				+0.2
2,313,617	+				+1.1
2,313,617	+				-1.3
2,313,617	+				-0.2
2,313,617	+				+0.1
2,313,617	+				+2.4
2,313,617	+				+0.2
2,313,617	+				-0.2
2,313,617	+				-0.3
2,313,617	+				-0.2
2,313,617	+				-0.4
2,313,617	+				-0.5
2,313,617	+				-0.6
2,313,617	+				+1.5
2,313,617	+				+1.2
2,313,617	+				-0.6
2,313,617	+				+0.1
2,313,617	+				+0.0
2,313,617	+				+0.9
2,313,617	+				-0.6
2,313,617	+				-0.7
2,313,617	+				-0.7
2,313,617	+				-1.5
2,313,617	+				-0.4
2,313,617	+				+0.1
2,313,617	+				-0.6
2,313,617	+				-1.4
2,313,617	+				+0.2
2,313,617	+				-0.4
2,313,617	+				+0.4
2,313,617	+				-0.7
2,313,617	+				-0.2
2,313,617	+				-0.3
2,313,617	+				-0.6
2,313,617	+				+0.9
2,313,617	+				+0.2
2,313,617	+				-0.7
2,313,617	+				-0.2
2,313,617	+				+0.2
2,313,617	+				+0.0
2,313,617	+				+0.8
2,313,617	+				-0.0
2,313,617	+				-0.4
2,313,617	+				-0.0
2,313,617	+				-0.3
2,313,617	+				-0.0
2,313,617	+				-0.5
2,313,617	+				+1.4
2,313,617	+				-2.1
2,313,617	+				-0.3
2,313,617	+				-0.2
2,313,617	+				-0.4
2,313,617	+				-0.6
2,313,617	+				+0.0
2,313,617	+				-0.0
2,313,617	+				-0.1
2,313,617	+				-0.8
2,313,617	+				-0.5
2,313,617	+				-0.5
2,313,617	+				+1.4
2,313,618	-				-0.9
2,313,618	-				+0.0
2,313,618	-				-0.4
2,313,618	-				-1.1
2,313,618	-				+0.1
2,313,618	-				+0.6
2,313,618	-				-0.7
2,313,618	-				-0.0
2,313,618	-				-0.4
2,313,618	-				-0.6
2,313,618	-				-0.8
2,313,618	-				-0.2
2,313,618	-				+1.1
2,313,618	-				+0.2
2,313,618	-				-0.6
2,313,618	-				-0.7
2,313,618	-				+0.9
2,313,618	-				+0.6
2,313,618	-				-0.8
2,313,618	-				-0.5
2,313,618	-				-0.9
2,313,618	-				-0.3
2,313,618	-				-2.4
2,313,618	-				+1.1
2,313,618	-				-1.5
2,313,618	-				-0.6
2,313,618	-				-0.5
2,313,618	-				-1.8
2,313,618	-				-0.1
2,313,618	-				-0.4
2,313,618	-				-0.4
2,313,618	-				+0.6
2,313,618	-				-0.0
2,313,618	-				-0.2
2,313,618	-				-2.0
2,313,618	-				-0.5
2,313,618	-				-0.3
2,313,618	-				+0.0
2,313,618	-				-1.2
2,313,618	-				-0.0
2,313,621	+				-0.6
2,313,621	+				-1.1
2,313,621	+				-0.6
2,313,621	+				-0.8
2,313,621	+				+0.0
2,313,621	+				-0.4
2,313,621	+				+0.2
2,313,621	+				+0.2
2,313,621	+				+0.3
2,313,621	+				-0.6
2,313,621	+				+0.8
2,313,622	-				-0.4
2,313,622	-				-0.4
2,313,622	-				-0.3
2,313,622	-				+0.2
2,313,622	-				+0.6
2,313,622	-				-0.2
2,313,622	-				+0.4
2,313,622	-				+0.2
2,313,622	-				-0.5
2,313,622	-				+0.2
2,313,622	-				+0.5
2,313,622	-				-0.4
2,313,622	-				-0.1
2,313,622	-				-1.4
2,313,678	+				+0.6
2,313,678	+				-1.0
2,313,678	+				+1.2
2,313,678	+				+1.1
2,313,679	-				-3.6
2,313,712	+		Psest_2161	0.12	+0.6
2,313,712	+		Psest_2161	0.12	+0.0
2,313,712	+		Psest_2161	0.12	+2.0
2,313,712	+		Psest_2161	0.12	-0.4
2,313,712	+		Psest_2161	0.12	-0.1
2,313,712	+		Psest_2161	0.12	-0.5
2,313,712	+		Psest_2161	0.12	+0.9
2,313,712	+		Psest_2161	0.12	+0.3
2,313,712	+		Psest_2161	0.12	+0.8
2,313,712	+		Psest_2161	0.12	-0.8
2,313,712	+		Psest_2161	0.12	-1.0
2,313,712	+		Psest_2161	0.12	+0.1
2,313,712	+		Psest_2161	0.12	-0.2
2,313,713	-		Psest_2161	0.13	-2.3
2,313,990	+		Psest_2161	0.47	-0.8
2,313,990	+		Psest_2161	0.47	+1.6
2,313,990	+		Psest_2161	0.47	+0.0
2,313,991	-		Psest_2161	0.47	-2.0
2,313,991	-		Psest_2161	0.47	-0.5
2,314,162	+		Psest_2161	0.68	+1.1
2,314,163	-		Psest_2161	0.69	-0.3
2,314,206	-		Psest_2161	0.74	-0.8
2,314,430	+				+0.5
2,314,430	+				-0.1
2,314,430	+				+1.1
2,314,430	+				-0.1
2,314,430	+				+0.8
2,314,431	-				-0.4
2,314,431	-				-1.6
2,314,431	-				+0.9
2,314,431	-				-1.8
2,314,530	+		Psest_2162	0.13	-1.1
2,314,530	+		Psest_2162	0.13	-0.2
2,314,536	+		Psest_2162	0.14	-0.1
2,314,537	-		Psest_2162	0.14	-1.1
2,314,537	-		Psest_2162	0.14	-1.2
2,314,671	+		Psest_2162	0.28	-1.6
2,314,671	+		Psest_2162	0.28	-0.4
2,314,671	+		Psest_2162	0.28	-0.4
2,314,672	-		Psest_2162	0.28	-1.3
2,314,672	-		Psest_2162	0.28	-0.6
2,314,701	+		Psest_2162	0.31	-0.4
2,314,701	+		Psest_2162	0.31	-0.5
2,314,701	+		Psest_2162	0.31	-0.9
2,314,701	+		Psest_2162	0.31	-0.7
2,314,701	+		Psest_2162	0.31	-0.3
2,314,701	+		Psest_2162	0.31	-0.4
2,314,702	-		Psest_2162	0.32	-2.0
2,314,702	-		Psest_2162	0.32	-1.5
2,314,702	-		Psest_2162	0.32	-3.3
2,314,702	-		Psest_2162	0.32	-0.8
2,314,776	+		Psest_2162	0.40	+1.7
2,314,776	+		Psest_2162	0.40	+0.8
2,314,776	+		Psest_2162	0.40	-1.2
2,314,777	-		Psest_2162	0.40	+0.3
2,314,777	-		Psest_2162	0.40	-2.2
2,314,777	-		Psest_2162	0.40	-1.4
2,314,777	-		Psest_2162	0.40	-1.6
2,314,777	-		Psest_2162	0.40	-0.4
2,314,780	+		Psest_2162	0.40	-0.8
2,314,781	-		Psest_2162	0.40	-0.8
2,314,781	-		Psest_2162	0.40	-0.8
2,314,872	+		Psest_2162	0.50	+0.4
2,314,873	-		Psest_2162	0.50	-0.2
2,314,873	-		Psest_2162	0.50	-0.1
2,314,949	+		Psest_2162	0.58	-1.1
2,314,949	+		Psest_2162	0.58	+0.4
2,314,950	-		Psest_2162	0.59	-0.2
2,315,187	+		Psest_2162	0.84	+0.3
2,315,187	+		Psest_2162	0.84	+0.1
2,315,187	+		Psest_2162	0.84	-1.2
2,315,268	+				-0.8
2,315,268	+				-0.0
2,315,308	+				-0.7
2,315,308	+				-1.0
2,315,412	-				-0.7
2,315,412	-				-1.6
2,315,445	+				-0.0
2,315,445	+				+1.6
2,315,445	+				+0.7
2,315,445	+				-0.6
2,315,445	+				+0.1
2,315,445	+				+0.0
2,315,445	+				+0.0
2,315,446	-				-0.4
2,315,446	-				-1.2
2,315,446	-				-2.5
2,315,446	-				-0.2
2,315,446	-				-0.1
2,315,446	-				-1.2
2,315,446	-				-0.9
2,315,446	-				-1.1
2,315,446	-				-1.4
2,315,446	-				-2.4
2,315,537	+				-1.4
2,315,538	-				-0.7
2,315,555	+				+1.6
2,315,556	-				+0.3
2,315,556	-				-0.7
2,315,556	-				-0.1
2,315,765	+				-0.0
2,315,765	+				+0.2
2,315,915	+		Psest_2163	0.22	-0.0
2,315,916	-		Psest_2163	0.22	+0.6
2,315,916	-		Psest_2163	0.22	+0.5
2,315,916	-		Psest_2163	0.22	-0.5
2,316,211	-		Psest_2163	0.54	-0.5
2,316,249	+		Psest_2163	0.58	+0.1
2,316,249	+		Psest_2163	0.58	+0.6
2,316,268	+		Psest_2163	0.60	-1.3