Strain Fitness in Shewanella amazonensis SB2B around Sama_3566

Experiment: Chlorite 0.078125 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chlorite 0.078125 mM
4,199,789	+				-1.0
4,199,789	+				+0.6
4,199,789	+				+0.4
4,199,789	+				+0.4
4,199,790	-				-0.5
4,199,790	-				+0.3
4,199,790	-				+0.1
4,199,793	+				+0.1
4,199,793	+				+1.8
4,199,793	+				-0.8
4,199,794	-				-1.3
4,199,794	-				-1.6
4,199,794	-				-0.4
4,199,794	-				-0.6
4,199,794	-				-0.4
4,199,794	-				-0.6
4,199,794	-				-0.8
4,199,805	+				-0.0
4,199,806	-				-0.2
4,199,827	+				+2.0
4,199,827	+				-0.6
4,199,827	+				-2.0
4,199,827	+				+0.4
4,199,828	-				-0.6
4,199,842	+				+2.0
4,199,842	+				-0.9
4,199,843	-				+0.1
4,199,843	-				-0.0
4,199,843	-				-1.2
4,199,847	+				+0.1
4,199,857	+				-0.8
4,199,857	+				-1.4
4,199,858	-				-0.5
4,199,858	-				-0.8
4,199,858	-				-0.3
4,199,864	+				-0.1
4,199,864	+				+0.6
4,199,864	+				-1.7
4,199,865	-				+0.4
4,199,865	-				+0.4
4,199,865	-				+0.8
4,199,865	-				+0.4
4,199,879	+		Sama_3565	0.10	+0.1
4,199,879	+		Sama_3565	0.10	+1.8
4,199,880	-		Sama_3565	0.11	-0.2
4,199,880	-		Sama_3565	0.11	-0.2
4,199,880	-		Sama_3565	0.11	+0.2
4,199,880	-		Sama_3565	0.11	-0.9
4,199,946	+		Sama_3565	0.18	-0.2
4,199,946	+		Sama_3565	0.18	+0.3
4,199,947	-		Sama_3565	0.18	-0.9
4,199,947	-		Sama_3565	0.18	+0.4
4,199,958	-		Sama_3565	0.19	+1.8
4,199,958	+		Sama_3565	0.19	-1.0
4,199,959	-		Sama_3565	0.20	+0.3
4,199,959	-		Sama_3565	0.20	+1.5
4,199,984	+		Sama_3565	0.22	+0.4
4,199,984	+		Sama_3565	0.22	-0.3
4,199,984	+		Sama_3565	0.22	-1.6
4,199,984	+		Sama_3565	0.22	+1.0
4,199,984	+		Sama_3565	0.22	-0.0
4,199,984	+		Sama_3565	0.22	-1.6
4,199,984	+		Sama_3565	0.22	-0.8
4,199,985	-		Sama_3565	0.22	-1.5
4,199,985	-		Sama_3565	0.22	+0.9
4,199,985	-		Sama_3565	0.22	-0.7
4,199,985	-		Sama_3565	0.22	-0.9
4,199,985	-		Sama_3565	0.22	+0.3
4,199,985	-		Sama_3565	0.22	+0.1
4,199,985	-		Sama_3565	0.22	-0.2
4,199,985	-		Sama_3565	0.22	+0.6
4,199,985	-		Sama_3565	0.22	-0.3
4,199,985	-		Sama_3565	0.22	+0.6
4,199,992	+		Sama_3565	0.23	-0.0
4,200,055	-		Sama_3565	0.30	-0.4
4,200,055	-		Sama_3565	0.30	+0.2
4,200,055	-		Sama_3565	0.30	+0.7
4,200,055	-		Sama_3565	0.30	+0.6
4,200,055	-		Sama_3565	0.30	+1.4
4,200,055	-		Sama_3565	0.30	+0.5
4,200,109	+		Sama_3565	0.37	-0.2
4,200,109	+		Sama_3565	0.37	-1.3
4,200,154	+		Sama_3565	0.42	+0.2
4,200,154	+		Sama_3565	0.42	-1.0
4,200,154	+		Sama_3565	0.42	-0.7
4,200,154	+		Sama_3565	0.42	-0.3
4,200,155	-		Sama_3565	0.42	+0.8
4,200,155	-		Sama_3565	0.42	-0.2
4,200,155	-		Sama_3565	0.42	-0.9
4,200,155	-		Sama_3565	0.42	+0.4
4,200,155	-		Sama_3565	0.42	-0.3
4,200,155	-		Sama_3565	0.42	+0.2
4,200,155	-		Sama_3565	0.42	-1.6
4,200,155	-		Sama_3565	0.42	+0.2
4,200,155	-		Sama_3565	0.42	+1.4
4,200,155	-		Sama_3565	0.42	-0.8
4,200,155	-		Sama_3565	0.42	+0.1
4,200,155	-		Sama_3565	0.42	+0.6
4,200,220	+		Sama_3565	0.49	-0.7
4,200,220	+		Sama_3565	0.49	-1.2
4,200,221	-		Sama_3565	0.49	-0.7
4,200,221	-		Sama_3565	0.49	+0.2
4,200,255	+		Sama_3565	0.53	+1.2
4,200,255	+		Sama_3565	0.53	-0.2
4,200,304	+		Sama_3565	0.59	-0.9
4,200,304	+		Sama_3565	0.59	+1.3
4,200,305	-		Sama_3565	0.59	-0.4
4,200,305	-		Sama_3565	0.59	-0.8
4,200,319	+		Sama_3565	0.61	-1.7
4,200,320	-		Sama_3565	0.61	+0.4
4,200,339	+		Sama_3565	0.63	-0.6
4,200,339	+		Sama_3565	0.63	-0.9
4,200,339	+		Sama_3565	0.63	+1.0
4,200,339	+		Sama_3565	0.63	-0.2
4,200,339	+		Sama_3565	0.63	+0.7
4,200,339	+		Sama_3565	0.63	-0.0
4,200,339	+		Sama_3565	0.63	-0.5
4,200,340	-		Sama_3565	0.63	-1.2
4,200,340	-		Sama_3565	0.63	-0.2
4,200,340	-		Sama_3565	0.63	+1.3
4,200,340	-		Sama_3565	0.63	-0.0
4,200,340	-		Sama_3565	0.63	-1.0
4,200,340	-		Sama_3565	0.63	+1.0
4,200,340	-		Sama_3565	0.63	+1.0
4,200,389	-		Sama_3565	0.69	-1.8
4,200,389	-		Sama_3565	0.69	+0.6
4,200,409	-		Sama_3565	0.71	+0.9
4,200,460	+		Sama_3565	0.77	-1.4
4,200,460	+		Sama_3565	0.77	+1.3
4,200,460	+		Sama_3565	0.77	+0.4
4,200,460	+		Sama_3565	0.77	-0.5
4,200,460	+		Sama_3565	0.77	-0.2
4,200,460	+		Sama_3565	0.77	-0.3
4,200,460	+		Sama_3565	0.77	+0.6
4,200,460	+		Sama_3565	0.77	-0.3
4,200,461	-		Sama_3565	0.77	-0.9
4,200,461	-		Sama_3565	0.77	-1.2
4,200,461	-		Sama_3565	0.77	-1.0
4,200,461	-		Sama_3565	0.77	+0.4
4,200,461	-		Sama_3565	0.77	+0.1
4,200,461	-		Sama_3565	0.77	-0.8
4,200,461	-		Sama_3565	0.77	+0.7
4,200,461	-		Sama_3565	0.77	-0.7
4,200,461	-		Sama_3565	0.77	-1.0
4,200,466	+		Sama_3565	0.77	+0.6
4,200,539	-		Sama_3565	0.86	-0.4
4,200,574	+		Sama_3565	0.90	+0.7
4,200,599	+				+1.3
4,200,600	-				+0.1
4,200,600	-				+0.4
4,200,600	-				-0.6
4,200,600	-				+0.7
4,200,600	-				-1.8
4,200,614	+				-0.0
4,200,719	+				+0.4
4,200,730	+				+0.6
4,200,731	-				-0.1
4,200,749	-				+1.2
4,200,844	+		Sama_3566	0.17	-0.4
4,200,893	-		Sama_3566	0.27	+0.4
4,200,911	+		Sama_3566	0.30	+0.7
4,200,911	+		Sama_3566	0.30	-0.5
4,200,911	+		Sama_3566	0.30	-1.7
4,200,911	+		Sama_3566	0.30	-0.9
4,200,912	-		Sama_3566	0.31	-0.3
4,200,912	-		Sama_3566	0.31	-1.8
4,200,940	-		Sama_3566	0.36	-0.4
4,200,978	+		Sama_3566	0.44	+0.2
4,201,063	+		Sama_3566	0.61	-1.2
4,201,063	+		Sama_3566	0.61	+0.8
4,201,146	+		Sama_3566	0.78	-0.9
4,201,146	+		Sama_3566	0.78	+0.2
4,201,147	-		Sama_3566	0.78	-0.6
4,201,174	+		Sama_3566	0.83	-0.9
4,201,175	-		Sama_3566	0.84	-0.0
4,201,175	-		Sama_3566	0.84	-0.1
4,201,224	+				+0.0
4,201,225	-				-1.1
4,201,253	+				-0.9
4,201,302	+				-0.0
4,201,302	+				-1.4
4,201,302	+				+0.8
4,201,303	-				-3.1
4,201,303	-				-0.9
4,201,303	-				+0.3
4,201,326	+				-0.2
4,201,326	+				-0.4
4,201,326	+				+0.3
4,201,327	-				-0.0
4,201,327	-				-0.3
4,201,347	-				+0.1
4,201,358	+				-0.8
4,201,359	-				+0.2
4,201,359	-				+0.2
4,201,361	+				-1.4
4,201,361	+				-0.9
4,201,362	-				-0.7
4,201,362	-				+0.2
4,201,362	-				-1.7
4,201,362	-				+1.8
4,201,362	-				+0.1
4,201,362	-				+0.1
4,201,368	-				-1.7
4,201,368	-				+0.8
4,201,392	-				-1.2
4,201,400	-				+0.5
4,201,400	-				+1.2
4,201,400	-				-0.2
4,201,402	+				+0.5
4,201,402	+				+0.3
4,201,403	-				-0.2
4,201,403	-				-0.6
4,201,403	-				+1.1
4,201,403	-				+2.4
4,201,412	-				-0.2
4,201,422	+				-0.7
4,201,422	+				+0.6
4,201,422	+				-1.3
4,201,423	-				-1.3
4,201,460	-				+0.3
4,201,460	-				-0.9
4,201,460	-				+0.1
4,201,520	-				-1.0
4,201,576	-				+0.1
4,201,579	+				-0.6
4,201,655	-				+1.4
4,201,673	-				+0.4
4,201,673	-				+0.9
4,201,749	+				+0.2
4,201,773	-				+2.1
4,201,805	+				-0.0
4,201,805	+				-0.3
4,201,806	-				+0.1
4,201,820	-				-0.7
4,201,872	+				+1.1
4,201,895	+				-0.8
4,201,896	-				+0.1
4,201,900	-				+0.9
4,201,904	+				-0.9
4,201,905	-				-1.2
4,201,905	-				+0.3
4,201,926	-				-0.6
4,201,935	+				-0.7
4,201,936	-				-0.1
4,201,936	-				-0.3
4,201,937	+				-1.7
4,201,938	-				-0.2
4,201,938	-				+1.2
4,201,952	-				+0.8
4,201,963	-				+1.4
4,202,004	+				-0.6
4,202,004	+				-1.9
4,202,193	+				-0.7