Strain Fitness in Shewanella amazonensis SB2B around Sama_1895

Experiment: Chlorite 0.078125 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chlorite 0.078125 mM
2,310,770	-		Sama_1894	0.55	-1.1
2,310,770	-		Sama_1894	0.55	-0.3
2,310,838	-		Sama_1894	0.59	+0.2
2,310,889	+		Sama_1894	0.63	-1.4
2,310,889	+		Sama_1894	0.63	+0.7
2,310,889	+		Sama_1894	0.63	+0.3
2,310,889	+		Sama_1894	0.63	+0.7
2,310,890	-		Sama_1894	0.63	+0.2
2,310,933	+		Sama_1894	0.65	+0.1
2,310,933	+		Sama_1894	0.65	-1.0
2,310,934	-		Sama_1894	0.66	+0.1
2,310,934	-		Sama_1894	0.66	+0.4
2,310,966	+		Sama_1894	0.68	-0.3
2,310,966	+		Sama_1894	0.68	-0.3
2,310,966	+		Sama_1894	0.68	+0.6
2,310,967	-		Sama_1894	0.68	-0.3
2,310,980	+		Sama_1894	0.68	+0.3
2,310,980	+		Sama_1894	0.68	-0.1
2,310,981	-		Sama_1894	0.69	+1.3
2,311,055	+		Sama_1894	0.73	-0.3
2,311,055	+		Sama_1894	0.73	-0.4
2,311,055	+		Sama_1894	0.73	-0.2
2,311,056	-		Sama_1894	0.73	+0.3
2,311,056	-		Sama_1894	0.73	-0.3
2,311,056	-		Sama_1894	0.73	+0.9
2,311,056	-		Sama_1894	0.73	-1.0
2,311,056	-		Sama_1894	0.73	+0.4
2,311,058	+		Sama_1894	0.73	-0.5
2,311,058	+		Sama_1894	0.73	+0.1
2,311,059	-		Sama_1894	0.74	+0.1
2,311,059	-		Sama_1894	0.74	-0.2
2,311,173	+		Sama_1894	0.81	+0.1
2,311,187	+		Sama_1894	0.82	-0.1
2,311,191	+		Sama_1894	0.82	+0.1
2,311,191	+		Sama_1894	0.82	-0.1
2,311,192	-		Sama_1894	0.82	-1.3
2,311,213	+		Sama_1894	0.83	+1.4
2,311,213	+		Sama_1894	0.83	-0.5
2,311,213	+		Sama_1894	0.83	-0.1
2,311,213	+		Sama_1894	0.83	-0.1
2,311,213	+		Sama_1894	0.83	+1.7
2,311,213	+		Sama_1894	0.83	-0.0
2,311,213	+		Sama_1894	0.83	-1.3
2,311,214	-		Sama_1894	0.83	+0.7
2,311,289	+		Sama_1894	0.88	+0.1
2,311,342	+				+0.2
2,311,342	+				-0.7
2,311,403	+				-0.1
2,311,404	-				+1.0
2,311,409	-				-0.8
2,311,470	+				-1.3
2,311,470	+				-1.0
2,311,470	+				-2.0
2,311,614	+				+0.2
2,311,617	+				+0.3
2,311,618	-				-0.1
2,311,618	-				+0.2
2,311,628	-				-0.8
2,311,672	+				-0.1
2,311,673	-				+0.1
2,311,755	+		Sama_1895	0.14	-0.1
2,311,765	+		Sama_1895	0.14	-0.3
2,311,876	+		Sama_1895	0.20	-1.0
2,311,879	+		Sama_1895	0.20	-1.2
2,311,880	-		Sama_1895	0.20	+2.7
2,311,984	-		Sama_1895	0.26	+1.3
2,312,034	+		Sama_1895	0.28	-0.3
2,312,034	+		Sama_1895	0.28	+0.5
2,312,035	-		Sama_1895	0.28	-0.1
2,312,035	-		Sama_1895	0.28	+1.0
2,312,077	+		Sama_1895	0.31	+0.0
2,312,101	+		Sama_1895	0.32	-1.0
2,312,170	+		Sama_1895	0.35	-0.5
2,312,170	+		Sama_1895	0.35	-1.6
2,312,170	+		Sama_1895	0.35	-0.3
2,312,170	+		Sama_1895	0.35	-0.8
2,312,170	+		Sama_1895	0.35	+0.9
2,312,170	+		Sama_1895	0.35	-0.2
2,312,171	-		Sama_1895	0.35	-1.4
2,312,171	-		Sama_1895	0.35	+0.4
2,312,171	-		Sama_1895	0.35	-1.5
2,312,197	+		Sama_1895	0.37	-0.5
2,312,240	+		Sama_1895	0.39	-1.7
2,312,269	+		Sama_1895	0.41	-1.7
2,312,297	+		Sama_1895	0.42	-0.8
2,312,297	+		Sama_1895	0.42	+0.5
2,312,298	-		Sama_1895	0.42	+0.1
2,312,323	-		Sama_1895	0.43	+0.7
2,312,339	+		Sama_1895	0.44	+1.3
2,312,339	+		Sama_1895	0.44	-0.7
2,312,515	+		Sama_1895	0.53	-0.3
2,312,515	+		Sama_1895	0.53	+0.3
2,312,660	+		Sama_1895	0.61	+0.4
2,312,660	+		Sama_1895	0.61	+0.1
2,312,660	+		Sama_1895	0.61	-0.1
2,312,661	-		Sama_1895	0.61	-1.6
2,312,717	+		Sama_1895	0.64	-0.3
2,312,769	-		Sama_1895	0.67	-0.9
2,312,862	+		Sama_1895	0.71	+1.7
2,312,862	+		Sama_1895	0.71	+1.4
2,313,086	+		Sama_1895	0.83	-0.5
2,313,086	+		Sama_1895	0.83	+0.1
2,313,087	-		Sama_1895	0.83	-0.3
2,313,087	-		Sama_1895	0.83	+0.7
2,313,092	-		Sama_1895	0.83	-0.0
2,313,152	-		Sama_1895	0.87	-1.0
2,313,152	-		Sama_1895	0.87	+0.2
2,313,173	-		Sama_1895	0.88	+0.2
2,313,174	+		Sama_1895	0.88	+0.8
2,313,174	+		Sama_1895	0.88	-0.1
2,313,175	-		Sama_1895	0.88	-0.4
2,313,175	-		Sama_1895	0.88	-0.3
2,313,175	-		Sama_1895	0.88	-2.0
2,313,205	+		Sama_1895	0.89	-0.6
2,313,310	+				-0.5
2,313,310	+				+1.0
2,313,332	-				-0.3
2,313,344	-				-0.1
2,313,364	-				-1.6
2,313,364	-				-0.5
2,313,364	-				-0.1
2,313,404	-				-1.1
2,313,404	-				-0.3
2,313,404	-				-0.9
2,313,404	-				-0.9
2,313,420	-				-0.1
2,313,448	-				-0.5
2,313,518	-				-0.1
2,313,529	+				+0.3
2,313,529	+				-0.9
2,313,529	+				-0.9
2,313,530	-				+0.7
2,313,535	+				+3.0
2,313,536	-				+0.3
2,313,542	+				+0.1
2,313,562	+				+0.5
2,313,632	+				-0.9
2,313,633	-				+0.7
2,313,687	+				-0.5
2,313,717	-		Sama_1896	0.10	+0.1
2,313,751	-		Sama_1896	0.15	-0.6
2,313,787	+		Sama_1896	0.19	+0.1
2,313,875	+		Sama_1896	0.30	-0.0
2,313,876	-		Sama_1896	0.30	-0.6
2,313,876	-		Sama_1896	0.30	-1.1
2,313,886	-		Sama_1896	0.32	+0.7
2,313,886	-		Sama_1896	0.32	-1.1
2,314,002	-		Sama_1896	0.46	-0.1
2,314,007	+		Sama_1896	0.47	+1.7
2,314,007	+		Sama_1896	0.47	+0.1
2,314,008	-		Sama_1896	0.47	+1.4
2,314,010	+		Sama_1896	0.47	-0.1
2,314,011	-		Sama_1896	0.48	-3.0
2,314,011	-		Sama_1896	0.48	-0.0
2,314,011	-		Sama_1896	0.48	+1.2
2,314,011	-		Sama_1896	0.48	+0.4
2,314,105	+		Sama_1896	0.59	+1.1
2,314,139	+		Sama_1896	0.64	-0.0
2,314,139	+		Sama_1896	0.64	-0.6
2,314,212	+		Sama_1896	0.73	+0.1
2,314,240	+		Sama_1896	0.77	+0.0
2,314,252	+		Sama_1896	0.78	+0.1
2,314,333	+		Sama_1896	0.88	+0.3
2,314,333	+		Sama_1896	0.88	+1.7
2,314,333	+		Sama_1896	0.88	-0.5
2,314,334	-		Sama_1896	0.88	-2.1
2,314,391	+				-0.5
2,314,391	+				-0.1