Experiment: Chlorite 0.078125 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Sama_0767 and Sama_0768 are separated by 53 nucleotides Sama_0768 and Sama_0769 are separated by 253 nucleotides
Sama_0767: Sama_0767 - putative methyl-accepting chemotaxis sensory transducer (RefSeq), at 950,251 to 951,891
_0767
Sama_0768: Sama_0768 - hypothetical protein (RefSeq), at 951,945 to 952,535
_0768
Sama_0769: Sama_0769 - UDP-N-acetylmuramate (RefSeq), at 952,789 to 954,165
_0769
Position (kb)
951
952
953 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 951.053 kb on + strand, within Sama_0767 at 951.255 kb on + strand, within Sama_0767 at 951.256 kb on - strand, within Sama_0767 at 951.256 kb on - strand, within Sama_0767 at 951.256 kb on - strand, within Sama_0767 at 951.262 kb on - strand, within Sama_0767 at 951.382 kb on - strand, within Sama_0767 at 951.434 kb on + strand, within Sama_0767 at 951.542 kb on + strand, within Sama_0767 at 951.544 kb on - strand, within Sama_0767 at 951.544 kb on - strand, within Sama_0767 at 951.600 kb on - strand, within Sama_0767 at 951.651 kb on + strand, within Sama_0767 at 951.652 kb on - strand, within Sama_0767 at 951.816 kb on + strand at 951.853 kb on - strand at 951.853 kb on - strand at 951.889 kb on + strand at 951.890 kb on - strand at 951.901 kb on - strand at 951.947 kb on - strand at 951.999 kb on + strand at 952.008 kb on - strand, within Sama_0768 at 952.176 kb on + strand, within Sama_0768 at 952.177 kb on - strand, within Sama_0768 at 952.177 kb on - strand, within Sama_0768 at 952.177 kb on - strand, within Sama_0768 at 952.261 kb on + strand, within Sama_0768 at 952.573 kb on + strand at 952.617 kb on + strand at 952.617 kb on + strand at 952.618 kb on - strand at 952.618 kb on - strand at 952.724 kb on + strand at 952.724 kb on + strand at 952.724 kb on + strand at 952.725 kb on - strand at 952.729 kb on + strand at 952.729 kb on + strand at 952.768 kb on + strand at 952.796 kb on + strand at 952.796 kb on + strand at 952.796 kb on + strand at 952.796 kb on + strand at 952.797 kb on - strand at 952.891 kb on + strand at 952.926 kb on + strand at 953.050 kb on + strand, within Sama_0769 at 953.050 kb on + strand, within Sama_0769 at 953.127 kb on + strand, within Sama_0769 at 953.272 kb on + strand, within Sama_0769 at 953.334 kb on + strand, within Sama_0769 at 953.364 kb on + strand, within Sama_0769 at 953.400 kb on + strand, within Sama_0769 at 953.400 kb on + strand, within Sama_0769 at 953.511 kb on + strand, within Sama_0769 at 953.511 kb on + strand, within Sama_0769
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorite 0.078125 mM remove 951,053 + Sama_0767 0.49 +0.1 951,255 + Sama_0767 0.61 +1.4 951,256 - Sama_0767 0.61 -1.1 951,256 - Sama_0767 0.61 -1.2 951,256 - Sama_0767 0.61 -0.5 951,262 - Sama_0767 0.62 +0.6 951,382 - Sama_0767 0.69 +0.5 951,434 + Sama_0767 0.72 -0.3 951,542 + Sama_0767 0.79 +1.6 951,544 - Sama_0767 0.79 -1.4 951,544 - Sama_0767 0.79 -1.1 951,600 - Sama_0767 0.82 +1.1 951,651 + Sama_0767 0.85 -1.2 951,652 - Sama_0767 0.85 +0.1 951,816 + +0.8 951,853 - +1.1 951,853 - -0.0 951,889 + +0.1 951,890 - +1.3 951,901 - +0.5 951,947 - +0.6 951,999 + -0.1 952,008 - Sama_0768 0.11 -0.3 952,176 + Sama_0768 0.39 -1.1 952,177 - Sama_0768 0.39 -0.9 952,177 - Sama_0768 0.39 -0.8 952,177 - Sama_0768 0.39 -0.5 952,261 + Sama_0768 0.53 -0.2 952,573 + -0.2 952,617 + -0.5 952,617 + +0.1 952,618 - +1.1 952,618 - -2.3 952,724 + -0.6 952,724 + -0.2 952,724 + -0.3 952,725 - -2.5 952,729 + +0.1 952,729 + +0.8 952,768 + -0.5 952,796 + -1.2 952,796 + -1.6 952,796 + -1.3 952,796 + +1.1 952,797 - -1.1 952,891 + +0.4 952,926 + +2.5 953,050 + Sama_0769 0.19 -0.3 953,050 + Sama_0769 0.19 -0.7 953,127 + Sama_0769 0.25 +2.1 953,272 + Sama_0769 0.35 -0.3 953,334 + Sama_0769 0.40 -0.3 953,364 + Sama_0769 0.42 -1.4 953,400 + Sama_0769 0.44 +0.7 953,400 + Sama_0769 0.44 -1.4 953,511 + Sama_0769 0.52 +0.6 953,511 + Sama_0769 0.52 +0.2
Or see this region's nucleotide sequence