Experiment: m.b. Benzethonium chloride 0.025 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PGA1_c04090 and PGA1_c04100 are separated by 350 nucleotides PGA1_c04100 and PGA1_c04110 are separated by 278 nucleotides
PGA1_c04090: PGA1_c04090 - beta-ketoadipyl-CoA thiolase PaaJ, at 393,581 to 394,783
_c04090
PGA1_c04100: PGA1_c04100 - sulfatase, at 395,134 to 396,780
_c04100
PGA1_c04110: PGA1_c04110 - putative fatty acid oxidation complex subunit alpha, at 397,059 to 399,152
_c04110
Position (kb) 395
396
397 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 394.143 kb on + strand, within PGA1_c04090 at 394.143 kb on + strand, within PGA1_c04090 at 394.151 kb on - strand, within PGA1_c04090 at 394.153 kb on + strand, within PGA1_c04090 at 394.193 kb on + strand, within PGA1_c04090 at 394.230 kb on - strand, within PGA1_c04090 at 394.262 kb on + strand, within PGA1_c04090 at 394.280 kb on + strand, within PGA1_c04090 at 394.280 kb on + strand, within PGA1_c04090 at 394.361 kb on + strand, within PGA1_c04090 at 394.361 kb on + strand, within PGA1_c04090 at 394.361 kb on + strand, within PGA1_c04090 at 394.369 kb on - strand, within PGA1_c04090 at 394.382 kb on + strand, within PGA1_c04090 at 394.396 kb on - strand, within PGA1_c04090 at 394.417 kb on - strand, within PGA1_c04090 at 394.424 kb on + strand, within PGA1_c04090 at 394.465 kb on + strand, within PGA1_c04090 at 394.548 kb on + strand, within PGA1_c04090 at 394.636 kb on + strand, within PGA1_c04090 at 394.650 kb on - strand, within PGA1_c04090 at 394.650 kb on - strand, within PGA1_c04090 at 394.702 kb on + strand at 394.702 kb on + strand at 394.710 kb on + strand at 394.718 kb on - strand at 394.850 kb on - strand at 394.868 kb on + strand at 394.906 kb on + strand at 394.944 kb on + strand at 394.944 kb on + strand at 394.949 kb on + strand at 394.949 kb on + strand at 394.949 kb on + strand at 394.949 kb on + strand at 394.949 kb on + strand at 394.949 kb on + strand at 394.949 kb on + strand at 394.957 kb on - strand at 394.957 kb on - strand at 394.957 kb on - strand at 395.043 kb on + strand at 395.049 kb on + strand at 395.049 kb on + strand at 395.049 kb on + strand at 395.051 kb on - strand at 395.055 kb on - strand at 395.057 kb on - strand at 395.062 kb on + strand at 395.062 kb on + strand at 395.062 kb on + strand at 395.062 kb on + strand at 395.062 kb on + strand at 395.062 kb on - strand at 395.070 kb on - strand at 395.070 kb on - strand at 395.070 kb on - strand at 395.096 kb on + strand at 395.148 kb on + strand at 395.176 kb on + strand at 395.183 kb on + strand at 395.184 kb on - strand at 395.200 kb on + strand at 395.202 kb on + strand at 395.208 kb on - strand at 395.225 kb on + strand at 395.258 kb on + strand at 395.266 kb on - strand at 395.266 kb on - strand at 395.276 kb on + strand at 395.285 kb on - strand at 395.298 kb on + strand at 395.316 kb on - strand, within PGA1_c04100 at 395.318 kb on + strand, within PGA1_c04100 at 395.345 kb on - strand, within PGA1_c04100 at 395.348 kb on + strand, within PGA1_c04100 at 395.363 kb on - strand, within PGA1_c04100 at 395.365 kb on - strand, within PGA1_c04100 at 395.378 kb on - strand, within PGA1_c04100 at 395.378 kb on - strand, within PGA1_c04100 at 395.388 kb on + strand, within PGA1_c04100 at 395.391 kb on - strand, within PGA1_c04100 at 395.395 kb on + strand, within PGA1_c04100 at 395.395 kb on + strand, within PGA1_c04100 at 395.427 kb on - strand, within PGA1_c04100 at 395.434 kb on - strand, within PGA1_c04100 at 395.449 kb on + strand, within PGA1_c04100 at 395.457 kb on - strand, within PGA1_c04100 at 395.467 kb on - strand, within PGA1_c04100 at 395.467 kb on - strand, within PGA1_c04100 at 395.470 kb on + strand, within PGA1_c04100 at 395.538 kb on + strand, within PGA1_c04100 at 395.546 kb on - strand, within PGA1_c04100 at 395.561 kb on - strand, within PGA1_c04100 at 395.561 kb on - strand, within PGA1_c04100 at 395.577 kb on + strand, within PGA1_c04100 at 395.577 kb on + strand, within PGA1_c04100 at 395.585 kb on - strand, within PGA1_c04100 at 395.605 kb on + strand, within PGA1_c04100 at 395.610 kb on + strand, within PGA1_c04100 at 395.615 kb on + strand, within PGA1_c04100 at 395.628 kb on + strand, within PGA1_c04100 at 395.628 kb on + strand, within PGA1_c04100 at 395.628 kb on + strand, within PGA1_c04100 at 395.636 kb on - strand, within PGA1_c04100 at 395.636 kb on - strand, within PGA1_c04100 at 395.691 kb on + strand, within PGA1_c04100 at 395.708 kb on - strand, within PGA1_c04100 at 395.722 kb on + strand, within PGA1_c04100 at 395.740 kb on - strand, within PGA1_c04100 at 395.799 kb on + strand, within PGA1_c04100 at 395.799 kb on + strand, within PGA1_c04100 at 395.799 kb on + strand, within PGA1_c04100 at 395.799 kb on + strand, within PGA1_c04100 at 395.799 kb on + strand, within PGA1_c04100 at 395.799 kb on + strand, within PGA1_c04100 at 395.799 kb on + strand, within PGA1_c04100 at 395.807 kb on - strand, within PGA1_c04100 at 395.807 kb on - strand, within PGA1_c04100 at 395.807 kb on - strand, within PGA1_c04100 at 395.807 kb on - strand, within PGA1_c04100 at 395.807 kb on - strand, within PGA1_c04100 at 395.807 kb on - strand, within PGA1_c04100 at 395.807 kb on - strand, within PGA1_c04100 at 395.807 kb on - strand, within PGA1_c04100 at 395.807 kb on - strand, within PGA1_c04100 at 395.807 kb on - strand, within PGA1_c04100 at 395.812 kb on + strand, within PGA1_c04100 at 395.846 kb on - strand, within PGA1_c04100 at 395.889 kb on + strand, within PGA1_c04100 at 395.897 kb on - strand, within PGA1_c04100 at 395.904 kb on - strand, within PGA1_c04100 at 395.925 kb on + strand, within PGA1_c04100 at 395.927 kb on - strand, within PGA1_c04100 at 395.933 kb on - strand, within PGA1_c04100 at 395.933 kb on - strand, within PGA1_c04100 at 396.003 kb on + strand, within PGA1_c04100 at 396.022 kb on - strand, within PGA1_c04100 at 396.057 kb on - strand, within PGA1_c04100 at 396.058 kb on - strand, within PGA1_c04100 at 396.064 kb on - strand, within PGA1_c04100 at 396.085 kb on + strand, within PGA1_c04100 at 396.110 kb on + strand, within PGA1_c04100 at 396.110 kb on + strand, within PGA1_c04100 at 396.118 kb on - strand, within PGA1_c04100 at 396.118 kb on - strand, within PGA1_c04100 at 396.298 kb on - strand, within PGA1_c04100 at 396.325 kb on - strand, within PGA1_c04100 at 396.388 kb on + strand, within PGA1_c04100 at 396.388 kb on + strand, within PGA1_c04100 at 396.388 kb on + strand, within PGA1_c04100 at 396.462 kb on + strand, within PGA1_c04100 at 396.550 kb on + strand, within PGA1_c04100 at 396.561 kb on + strand, within PGA1_c04100 at 396.563 kb on - strand, within PGA1_c04100 at 396.563 kb on - strand, within PGA1_c04100 at 396.568 kb on - strand, within PGA1_c04100 at 396.594 kb on - strand, within PGA1_c04100 at 396.600 kb on - strand, within PGA1_c04100 at 396.644 kb on - strand at 396.657 kb on - strand at 396.707 kb on + strand at 396.715 kb on - strand at 396.744 kb on + strand at 396.811 kb on - strand at 397.203 kb on + strand at 397.208 kb on + strand at 397.208 kb on + strand at 397.216 kb on - strand at 397.216 kb on - strand at 397.345 kb on + strand, within PGA1_c04110 at 397.350 kb on + strand, within PGA1_c04110 at 397.353 kb on - strand, within PGA1_c04110 at 397.358 kb on - strand, within PGA1_c04110 at 397.358 kb on - strand, within PGA1_c04110 at 397.362 kb on + strand, within PGA1_c04110 at 397.488 kb on + strand, within PGA1_c04110 at 397.488 kb on + strand, within PGA1_c04110 at 397.500 kb on + strand, within PGA1_c04110 at 397.604 kb on + strand, within PGA1_c04110 at 397.612 kb on - strand, within PGA1_c04110 at 397.613 kb on - strand, within PGA1_c04110 at 397.753 kb on - strand, within PGA1_c04110 at 397.755 kb on + strand, within PGA1_c04110 at 397.755 kb on + strand, within PGA1_c04110 at 397.773 kb on + strand, within PGA1_c04110
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Benzethonium chloride 0.025 mM remove 394,143 + PGA1_c04090 0.47 -3.5 394,143 + PGA1_c04090 0.47 +2.4 394,151 - PGA1_c04090 0.47 -1.5 394,153 + PGA1_c04090 0.48 -1.0 394,193 + PGA1_c04090 0.51 -0.3 394,230 - PGA1_c04090 0.54 -1.6 394,262 + PGA1_c04090 0.57 -0.8 394,280 + PGA1_c04090 0.58 -2.8 394,280 + PGA1_c04090 0.58 +1.9 394,361 + PGA1_c04090 0.65 -2.4 394,361 + PGA1_c04090 0.65 -2.4 394,361 + PGA1_c04090 0.65 +2.1 394,369 - PGA1_c04090 0.66 +2.5 394,382 + PGA1_c04090 0.67 +1.1 394,396 - PGA1_c04090 0.68 +0.1 394,417 - PGA1_c04090 0.69 +1.1 394,424 + PGA1_c04090 0.70 -2.6 394,465 + PGA1_c04090 0.73 +0.1 394,548 + PGA1_c04090 0.80 -1.9 394,636 + PGA1_c04090 0.88 +1.3 394,650 - PGA1_c04090 0.89 -0.6 394,650 - PGA1_c04090 0.89 +1.4 394,702 + +0.2 394,702 + +4.1 394,710 + +0.2 394,718 - +2.6 394,850 - +1.8 394,868 + -0.8 394,906 + -0.2 394,944 + -0.3 394,944 + +3.2 394,949 + +0.4 394,949 + -1.3 394,949 + -1.0 394,949 + -1.7 394,949 + +2.4 394,949 + +0.3 394,949 + -2.7 394,957 - +0.5 394,957 - +0.2 394,957 - -2.8 395,043 + +2.8 395,049 + +1.7 395,049 + +0.6 395,049 + +1.8 395,051 - +0.6 395,055 - -1.8 395,057 - +1.0 395,062 + +0.8 395,062 + +1.4 395,062 + -1.2 395,062 + +1.1 395,062 + +1.6 395,062 - +0.8 395,070 - +2.3 395,070 - -0.3 395,070 - +0.5 395,096 + +0.2 395,148 + -1.2 395,176 + -2.6 395,183 + +0.2 395,184 - -2.6 395,200 + -0.6 395,202 + -0.9 395,208 - +3.4 395,225 + +1.8 395,258 + -3.2 395,266 - +0.2 395,266 - -1.3 395,276 + +0.6 395,285 - +1.2 395,298 + -0.6 395,316 - PGA1_c04100 0.11 -0.6 395,318 + PGA1_c04100 0.11 -0.8 395,345 - PGA1_c04100 0.13 +2.9 395,348 + PGA1_c04100 0.13 -0.6 395,363 - PGA1_c04100 0.14 +0.0 395,365 - PGA1_c04100 0.14 +0.5 395,378 - PGA1_c04100 0.15 -0.7 395,378 - PGA1_c04100 0.15 +2.2 395,388 + PGA1_c04100 0.15 -0.8 395,391 - PGA1_c04100 0.16 -0.4 395,395 + PGA1_c04100 0.16 -1.6 395,395 + PGA1_c04100 0.16 -0.4 395,427 - PGA1_c04100 0.18 -0.7 395,434 - PGA1_c04100 0.18 -0.6 395,449 + PGA1_c04100 0.19 -1.6 395,457 - PGA1_c04100 0.20 -1.4 395,467 - PGA1_c04100 0.20 +0.6 395,467 - PGA1_c04100 0.20 +1.0 395,470 + PGA1_c04100 0.20 +2.9 395,538 + PGA1_c04100 0.25 +1.8 395,546 - PGA1_c04100 0.25 +0.0 395,561 - PGA1_c04100 0.26 +0.2 395,561 - PGA1_c04100 0.26 +1.5 395,577 + PGA1_c04100 0.27 -1.8 395,577 + PGA1_c04100 0.27 +2.7 395,585 - PGA1_c04100 0.27 -1.5 395,605 + PGA1_c04100 0.29 +2.9 395,610 + PGA1_c04100 0.29 -1.0 395,615 + PGA1_c04100 0.29 +0.0 395,628 + PGA1_c04100 0.30 -1.3 395,628 + PGA1_c04100 0.30 -3.3 395,628 + PGA1_c04100 0.30 +0.6 395,636 - PGA1_c04100 0.30 -2.1 395,636 - PGA1_c04100 0.30 +1.8 395,691 + PGA1_c04100 0.34 +2.7 395,708 - PGA1_c04100 0.35 +1.3 395,722 + PGA1_c04100 0.36 +1.3 395,740 - PGA1_c04100 0.37 -0.3 395,799 + PGA1_c04100 0.40 -2.2 395,799 + PGA1_c04100 0.40 +1.5 395,799 + PGA1_c04100 0.40 +1.2 395,799 + PGA1_c04100 0.40 +1.8 395,799 + PGA1_c04100 0.40 +2.2 395,799 + PGA1_c04100 0.40 -0.4 395,799 + PGA1_c04100 0.40 -1.0 395,807 - PGA1_c04100 0.41 -1.5 395,807 - PGA1_c04100 0.41 -3.6 395,807 - PGA1_c04100 0.41 +3.2 395,807 - PGA1_c04100 0.41 +0.6 395,807 - PGA1_c04100 0.41 -1.8 395,807 - PGA1_c04100 0.41 +0.4 395,807 - PGA1_c04100 0.41 +2.7 395,807 - PGA1_c04100 0.41 -0.4 395,807 - PGA1_c04100 0.41 -2.5 395,807 - PGA1_c04100 0.41 -0.9 395,812 + PGA1_c04100 0.41 -1.3 395,846 - PGA1_c04100 0.43 -2.1 395,889 + PGA1_c04100 0.46 +0.7 395,897 - PGA1_c04100 0.46 +2.1 395,904 - PGA1_c04100 0.47 +0.7 395,925 + PGA1_c04100 0.48 -0.6 395,927 - PGA1_c04100 0.48 -2.0 395,933 - PGA1_c04100 0.49 +0.2 395,933 - PGA1_c04100 0.49 +1.4 396,003 + PGA1_c04100 0.53 -0.8 396,022 - PGA1_c04100 0.54 -2.6 396,057 - PGA1_c04100 0.56 -2.8 396,058 - PGA1_c04100 0.56 -1.7 396,064 - PGA1_c04100 0.56 +1.3 396,085 + PGA1_c04100 0.58 -1.0 396,110 + PGA1_c04100 0.59 +2.8 396,110 + PGA1_c04100 0.59 +3.3 396,118 - PGA1_c04100 0.60 +1.7 396,118 - PGA1_c04100 0.60 +0.6 396,298 - PGA1_c04100 0.71 -1.5 396,325 - PGA1_c04100 0.72 -1.2 396,388 + PGA1_c04100 0.76 -1.7 396,388 + PGA1_c04100 0.76 +0.6 396,388 + PGA1_c04100 0.76 +2.2 396,462 + PGA1_c04100 0.81 +1.4 396,550 + PGA1_c04100 0.86 +1.2 396,561 + PGA1_c04100 0.87 -0.8 396,563 - PGA1_c04100 0.87 +1.7 396,563 - PGA1_c04100 0.87 +0.4 396,568 - PGA1_c04100 0.87 -0.6 396,594 - PGA1_c04100 0.89 +0.2 396,600 - PGA1_c04100 0.89 +2.0 396,644 - +0.2 396,657 - -1.0 396,707 + -1.4 396,715 - +0.7 396,744 + -0.5 396,811 - -2.6 397,203 + +1.5 397,208 + +2.5 397,208 + -1.4 397,216 - +1.3 397,216 - -2.2 397,345 + PGA1_c04110 0.14 +1.1 397,350 + PGA1_c04110 0.14 -0.2 397,353 - PGA1_c04110 0.14 -1.5 397,358 - PGA1_c04110 0.14 +2.4 397,358 - PGA1_c04110 0.14 -0.8 397,362 + PGA1_c04110 0.14 -1.4 397,488 + PGA1_c04110 0.20 +0.6 397,488 + PGA1_c04110 0.20 +3.0 397,500 + PGA1_c04110 0.21 -1.5 397,604 + PGA1_c04110 0.26 -0.6 397,612 - PGA1_c04110 0.26 +1.9 397,613 - PGA1_c04110 0.26 +1.5 397,753 - PGA1_c04110 0.33 +2.3 397,755 + PGA1_c04110 0.33 -1.7 397,755 + PGA1_c04110 0.33 +0.4 397,773 + PGA1_c04110 0.34 -0.8
Or see this region's nucleotide sequence