Experiment: m.b. Benzethonium chloride 0.025 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PGA1_c17410 and PGA1_c17420 are separated by 247 nucleotides PGA1_c17420 and PGA1_c17430 are separated by 103 nucleotides
PGA1_c17410: PGA1_c17410 - MFS type transporter, at 1,821,390 to 1,822,664
_c17410
PGA1_c17420: PGA1_c17420 - S-adenosylmethionine:tRNA ribosyltransferase-isomerase QueA, at 1,822,912 to 1,823,982
_c17420
PGA1_c17430: PGA1_c17430 - hypothetical protein, at 1,824,086 to 1,827,802
_c17430
Position (kb)
1822
1823
1824 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 1821.934 kb on + strand, within PGA1_c17410 at 1822.023 kb on + strand, within PGA1_c17410 at 1822.046 kb on + strand, within PGA1_c17410 at 1822.051 kb on + strand, within PGA1_c17410 at 1822.056 kb on + strand, within PGA1_c17410 at 1822.056 kb on + strand, within PGA1_c17410 at 1822.056 kb on + strand, within PGA1_c17410 at 1822.064 kb on - strand, within PGA1_c17410 at 1822.064 kb on - strand, within PGA1_c17410 at 1822.104 kb on - strand, within PGA1_c17410 at 1822.109 kb on - strand, within PGA1_c17410 at 1822.114 kb on - strand, within PGA1_c17410 at 1822.223 kb on + strand, within PGA1_c17410 at 1822.245 kb on + strand, within PGA1_c17410 at 1822.255 kb on + strand, within PGA1_c17410 at 1822.255 kb on + strand, within PGA1_c17410 at 1822.255 kb on + strand, within PGA1_c17410 at 1822.255 kb on + strand, within PGA1_c17410 at 1822.263 kb on - strand, within PGA1_c17410 at 1822.326 kb on + strand, within PGA1_c17410 at 1822.380 kb on - strand, within PGA1_c17410 at 1822.397 kb on - strand, within PGA1_c17410 at 1822.431 kb on + strand, within PGA1_c17410 at 1822.486 kb on + strand, within PGA1_c17410 at 1822.554 kb on + strand at 1822.562 kb on - strand at 1822.590 kb on + strand at 1822.632 kb on - strand at 1822.707 kb on + strand at 1822.713 kb on + strand at 1822.725 kb on + strand at 1822.733 kb on - strand at 1822.733 kb on - strand at 1822.837 kb on - strand at 1822.867 kb on + strand at 1822.873 kb on - strand at 1822.875 kb on - strand at 1822.894 kb on - strand at 1822.927 kb on - strand at 1823.149 kb on + strand, within PGA1_c17420 at 1823.375 kb on + strand, within PGA1_c17420 at 1823.375 kb on + strand, within PGA1_c17420 at 1823.383 kb on - strand, within PGA1_c17420 at 1823.383 kb on - strand, within PGA1_c17420 at 1823.383 kb on - strand, within PGA1_c17420 at 1823.593 kb on + strand, within PGA1_c17420 at 1823.593 kb on + strand, within PGA1_c17420 at 1823.976 kb on + strand at 1824.016 kb on - strand at 1824.083 kb on + strand at 1824.111 kb on + strand at 1824.142 kb on + strand at 1824.143 kb on - strand at 1824.145 kb on + strand at 1824.264 kb on + strand at 1824.330 kb on + strand at 1824.343 kb on + strand at 1824.410 kb on - strand at 1824.445 kb on - strand at 1824.628 kb on + strand, within PGA1_c17430 at 1824.659 kb on + strand, within PGA1_c17430 at 1824.909 kb on - strand, within PGA1_c17430
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Benzethonium chloride 0.025 mM remove 1,821,934 + PGA1_c17410 0.43 +1.9 1,822,023 + PGA1_c17410 0.50 -1.4 1,822,046 + PGA1_c17410 0.51 +0.4 1,822,051 + PGA1_c17410 0.52 -1.8 1,822,056 + PGA1_c17410 0.52 -0.2 1,822,056 + PGA1_c17410 0.52 +1.4 1,822,056 + PGA1_c17410 0.52 +1.6 1,822,064 - PGA1_c17410 0.53 +0.2 1,822,064 - PGA1_c17410 0.53 -1.9 1,822,104 - PGA1_c17410 0.56 +2.8 1,822,109 - PGA1_c17410 0.56 -0.3 1,822,114 - PGA1_c17410 0.57 -0.9 1,822,223 + PGA1_c17410 0.65 -1.0 1,822,245 + PGA1_c17410 0.67 +0.3 1,822,255 + PGA1_c17410 0.68 -1.5 1,822,255 + PGA1_c17410 0.68 -1.5 1,822,255 + PGA1_c17410 0.68 -1.5 1,822,255 + PGA1_c17410 0.68 -0.9 1,822,263 - PGA1_c17410 0.68 +0.6 1,822,326 + PGA1_c17410 0.73 -1.5 1,822,380 - PGA1_c17410 0.78 -0.7 1,822,397 - PGA1_c17410 0.79 +0.4 1,822,431 + PGA1_c17410 0.82 +2.9 1,822,486 + PGA1_c17410 0.86 -0.2 1,822,554 + -0.6 1,822,562 - +1.3 1,822,590 + -1.2 1,822,632 - -0.1 1,822,707 + -1.1 1,822,713 + -3.0 1,822,725 + +1.2 1,822,733 - +4.2 1,822,733 - +1.0 1,822,837 - -1.5 1,822,867 + +1.7 1,822,873 - -0.7 1,822,875 - +1.6 1,822,894 - +0.6 1,822,927 - +0.3 1,823,149 + PGA1_c17420 0.22 -0.9 1,823,375 + PGA1_c17420 0.43 -1.7 1,823,375 + PGA1_c17420 0.43 -1.4 1,823,383 - PGA1_c17420 0.44 -0.7 1,823,383 - PGA1_c17420 0.44 -0.5 1,823,383 - PGA1_c17420 0.44 +0.1 1,823,593 + PGA1_c17420 0.64 -1.4 1,823,593 + PGA1_c17420 0.64 +2.1 1,823,976 + -0.0 1,824,016 - +0.6 1,824,083 + -0.3 1,824,111 + -0.5 1,824,142 + -0.5 1,824,143 - -0.2 1,824,145 + -0.7 1,824,264 + -1.1 1,824,330 + -1.7 1,824,343 + -0.2 1,824,410 - -1.2 1,824,445 - -0.9 1,824,628 + PGA1_c17430 0.15 -3.0 1,824,659 + PGA1_c17430 0.15 -1.1 1,824,909 - PGA1_c17430 0.22 -0.7
Or see this region's nucleotide sequence