Experiment: m.b. Benzethonium chloride 0.025 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PGA1_c14350 and PGA1_c14360 are separated by 125 nucleotides PGA1_c14360 and PGA1_c14370 are separated by 139 nucleotides PGA1_c14370 and PGA1_c14380 overlap by 4 nucleotides
PGA1_c14350: PGA1_c14350 - Protein of unknown function (DUF1153)., at 1,490,168 to 1,490,446
_c14350
PGA1_c14360: PGA1_c14360 - cell cycle response regulator, at 1,490,572 to 1,491,291
_c14360
PGA1_c14370: PGA1_c14370 - DNA ligase LigA, at 1,491,431 to 1,493,689
_c14370
PGA1_c14380: PGA1_c14380 - ATP-dependent DNA helicase RecG, at 1,493,686 to 1,495,776
_c14380
Position (kb) 1491
1492
1493
1494 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 1490.464 kb on + strand at 1490.464 kb on + strand at 1490.464 kb on + strand at 1490.464 kb on + strand at 1490.464 kb on + strand at 1490.464 kb on + strand at 1490.464 kb on + strand at 1490.464 kb on + strand at 1490.464 kb on + strand at 1490.464 kb on + strand at 1490.464 kb on + strand at 1490.464 kb on + strand at 1490.464 kb on + strand at 1490.464 kb on + strand at 1490.464 kb on + strand at 1490.464 kb on + strand at 1490.464 kb on + strand at 1490.464 kb on + strand at 1490.464 kb on + strand at 1490.464 kb on + strand at 1490.464 kb on + strand at 1490.464 kb on + strand at 1490.464 kb on + strand at 1490.464 kb on + strand at 1490.464 kb on + strand at 1490.464 kb on + strand at 1490.464 kb on + strand at 1490.464 kb on + strand at 1490.464 kb on + strand at 1490.464 kb on + strand at 1490.464 kb on + strand at 1490.464 kb on + strand at 1490.464 kb on + strand at 1490.464 kb on + strand at 1490.464 kb on + strand at 1490.464 kb on + strand at 1490.464 kb on + strand at 1490.464 kb on + strand at 1490.464 kb on + strand at 1490.464 kb on + strand at 1490.464 kb on + strand at 1490.464 kb on + strand at 1490.464 kb on + strand at 1490.464 kb on + strand at 1490.464 kb on + strand at 1490.464 kb on + strand at 1490.464 kb on + strand at 1490.464 kb on + strand at 1490.464 kb on + strand at 1490.464 kb on + strand at 1490.464 kb on + strand at 1490.464 kb on + strand at 1490.464 kb on + strand at 1490.464 kb on + strand at 1490.464 kb on + strand at 1490.464 kb on + strand at 1490.464 kb on + strand at 1490.464 kb on + strand at 1490.464 kb on + strand at 1490.464 kb on + strand at 1490.464 kb on + strand at 1490.464 kb on + strand at 1490.464 kb on + strand at 1490.464 kb on + strand at 1490.464 kb on + strand at 1490.464 kb on + strand at 1490.464 kb on + strand at 1490.464 kb on + strand at 1490.464 kb on + strand at 1490.464 kb on + strand at 1490.464 kb on + strand at 1490.464 kb on + strand at 1490.464 kb on + strand at 1490.464 kb on + strand at 1490.464 kb on + strand at 1490.464 kb on + strand at 1490.464 kb on + strand at 1490.464 kb on + strand at 1490.464 kb on + strand at 1490.464 kb on + strand at 1490.464 kb on + strand at 1490.464 kb on + strand at 1490.464 kb on + strand at 1490.464 kb on + strand at 1490.464 kb on + strand at 1490.464 kb on + strand at 1490.464 kb on + strand at 1490.464 kb on + strand at 1490.466 kb on + strand at 1490.466 kb on + strand at 1490.472 kb on - strand at 1490.472 kb on - strand at 1490.472 kb on - strand at 1490.472 kb on - strand at 1490.472 kb on - strand at 1490.472 kb on - strand at 1490.472 kb on - strand at 1490.472 kb on - strand at 1490.472 kb on - strand at 1490.472 kb on - strand at 1490.472 kb on - strand at 1490.472 kb on - strand at 1490.472 kb on - strand at 1490.472 kb on - strand at 1490.472 kb on - strand at 1490.472 kb on - strand at 1490.472 kb on - strand at 1490.472 kb on - strand at 1490.472 kb on - strand at 1490.472 kb on - strand at 1490.472 kb on - strand at 1490.472 kb on - strand at 1490.472 kb on - strand at 1490.472 kb on - strand at 1490.472 kb on - strand at 1490.472 kb on - strand at 1490.472 kb on - strand at 1490.472 kb on - strand at 1490.472 kb on - strand at 1490.472 kb on - strand at 1490.472 kb on - strand at 1490.472 kb on - strand at 1490.472 kb on - strand at 1490.472 kb on - strand at 1490.472 kb on - strand at 1490.472 kb on - strand at 1490.472 kb on - strand at 1490.472 kb on - strand at 1490.472 kb on - strand at 1490.472 kb on - strand at 1490.472 kb on - strand at 1490.472 kb on - strand at 1490.472 kb on - strand at 1490.472 kb on - strand at 1490.472 kb on - strand at 1490.472 kb on - strand at 1490.472 kb on - strand at 1490.472 kb on - strand at 1490.472 kb on - strand at 1490.472 kb on - strand at 1490.472 kb on - strand at 1490.472 kb on - strand at 1490.472 kb on - strand at 1490.472 kb on - strand at 1490.472 kb on - strand at 1490.472 kb on - strand at 1490.472 kb on - strand at 1490.472 kb on - strand at 1490.472 kb on - strand at 1490.472 kb on - strand at 1490.472 kb on - strand at 1490.472 kb on - strand at 1490.472 kb on - strand at 1490.472 kb on - strand at 1490.472 kb on - strand at 1490.472 kb on - strand at 1490.472 kb on - strand at 1490.472 kb on - strand at 1490.472 kb on - strand at 1490.472 kb on - strand at 1490.474 kb on - strand at 1490.526 kb on + strand at 1490.526 kb on + strand at 1490.540 kb on + strand at 1490.542 kb on + strand at 1490.542 kb on + strand at 1490.548 kb on - strand at 1490.550 kb on + strand at 1490.550 kb on + strand at 1490.550 kb on + strand at 1490.550 kb on + strand at 1490.550 kb on + strand at 1490.550 kb on + strand at 1490.550 kb on + strand at 1490.550 kb on + strand at 1490.550 kb on + strand at 1490.550 kb on + strand at 1490.550 kb on + strand at 1490.550 kb on - strand at 1490.555 kb on - strand at 1490.558 kb on - strand at 1490.558 kb on - strand at 1490.558 kb on - strand at 1490.558 kb on - strand at 1490.558 kb on - strand at 1490.558 kb on - strand at 1490.558 kb on - strand at 1490.558 kb on - strand at 1490.558 kb on - strand at 1490.592 kb on + strand at 1490.608 kb on + strand at 1490.613 kb on - strand at 1490.615 kb on + strand at 1490.615 kb on + strand at 1490.623 kb on - strand at 1490.623 kb on - strand at 1490.623 kb on - strand at 1490.623 kb on - strand at 1490.628 kb on - strand at 1490.629 kb on - strand at 1490.629 kb on - strand at 1490.643 kb on + strand at 1490.643 kb on + strand at 1490.643 kb on + strand at 1490.643 kb on + strand at 1490.643 kb on + strand at 1490.643 kb on + strand at 1490.643 kb on + strand at 1490.643 kb on + strand at 1490.649 kb on - strand, within PGA1_c14360 at 1490.651 kb on - strand, within PGA1_c14360 at 1490.723 kb on + strand, within PGA1_c14360 at 1490.723 kb on + strand, within PGA1_c14360 at 1490.730 kb on - strand, within PGA1_c14360 at 1490.731 kb on - strand, within PGA1_c14360 at 1490.731 kb on - strand, within PGA1_c14360 at 1490.731 kb on - strand, within PGA1_c14360 at 1490.731 kb on - strand, within PGA1_c14360 at 1490.747 kb on + strand, within PGA1_c14360 at 1490.755 kb on - strand, within PGA1_c14360 at 1490.805 kb on + strand, within PGA1_c14360 at 1490.818 kb on - strand, within PGA1_c14360 at 1490.868 kb on + strand, within PGA1_c14360 at 1490.876 kb on - strand, within PGA1_c14360 at 1490.893 kb on + strand, within PGA1_c14360 at 1490.913 kb on - strand, within PGA1_c14360 at 1490.924 kb on + strand, within PGA1_c14360 at 1490.957 kb on - strand, within PGA1_c14360 at 1490.967 kb on - strand, within PGA1_c14360 at 1490.977 kb on - strand, within PGA1_c14360 at 1490.998 kb on - strand, within PGA1_c14360 at 1490.998 kb on - strand, within PGA1_c14360 at 1491.011 kb on + strand, within PGA1_c14360 at 1491.071 kb on - strand, within PGA1_c14360 at 1491.153 kb on - strand, within PGA1_c14360 at 1491.177 kb on - strand, within PGA1_c14360 at 1491.190 kb on + strand, within PGA1_c14360 at 1491.284 kb on - strand at 1491.285 kb on + strand at 1491.293 kb on - strand at 1491.294 kb on - strand at 1491.400 kb on + strand at 1491.421 kb on + strand at 1491.422 kb on + strand at 1491.429 kb on + strand at 1493.869 kb on - strand at 1493.897 kb on - strand, within PGA1_c14380 at 1493.915 kb on - strand, within PGA1_c14380 at 1493.922 kb on + strand, within PGA1_c14380 at 1493.942 kb on + strand, within PGA1_c14380 at 1494.043 kb on + strand, within PGA1_c14380 at 1494.053 kb on + strand, within PGA1_c14380 at 1494.111 kb on + strand, within PGA1_c14380 at 1494.191 kb on - strand, within PGA1_c14380 at 1494.275 kb on + strand, within PGA1_c14380 at 1494.362 kb on - strand, within PGA1_c14380 at 1494.367 kb on - strand, within PGA1_c14380 at 1494.524 kb on + strand, within PGA1_c14380 at 1494.548 kb on - strand, within PGA1_c14380
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Benzethonium chloride 0.025 mM remove 1,490,464 + +1.2 1,490,464 + -0.6 1,490,464 + -1.5 1,490,464 + +0.2 1,490,464 + -0.1 1,490,464 + -0.2 1,490,464 + +2.7 1,490,464 + -0.1 1,490,464 + -2.5 1,490,464 + -0.4 1,490,464 + +1.8 1,490,464 + -1.5 1,490,464 + -1.1 1,490,464 + -0.6 1,490,464 + +0.8 1,490,464 + -0.1 1,490,464 + +0.4 1,490,464 + -0.1 1,490,464 + -0.2 1,490,464 + +0.4 1,490,464 + -1.5 1,490,464 + -0.2 1,490,464 + -0.6 1,490,464 + -2.2 1,490,464 + -2.2 1,490,464 + +0.4 1,490,464 + -1.1 1,490,464 + -0.9 1,490,464 + -0.4 1,490,464 + +0.5 1,490,464 + -1.3 1,490,464 + +0.1 1,490,464 + -2.6 1,490,464 + +2.4 1,490,464 + +0.5 1,490,464 + -1.6 1,490,464 + -0.6 1,490,464 + +2.6 1,490,464 + +2.9 1,490,464 + +1.5 1,490,464 + -1.2 1,490,464 + +3.7 1,490,464 + -2.0 1,490,464 + +0.4 1,490,464 + +1.9 1,490,464 + +0.3 1,490,464 + +0.5 1,490,464 + -1.4 1,490,464 + -0.6 1,490,464 + +0.7 1,490,464 + -0.1 1,490,464 + +0.4 1,490,464 + +0.8 1,490,464 + -0.9 1,490,464 + -1.4 1,490,464 + -0.1 1,490,464 + +0.6 1,490,464 + -0.9 1,490,464 + -0.4 1,490,464 + -1.2 1,490,464 + -2.6 1,490,464 + -1.4 1,490,464 + +0.9 1,490,464 + +1.1 1,490,464 + -2.1 1,490,464 + +0.0 1,490,464 + -0.1 1,490,464 + +0.9 1,490,464 + -0.4 1,490,464 + +1.5 1,490,464 + -0.6 1,490,464 + +0.6 1,490,464 + -0.1 1,490,464 + +1.3 1,490,464 + -0.6 1,490,464 + +0.4 1,490,464 + +0.9 1,490,464 + -0.5 1,490,464 + +1.4 1,490,464 + -0.6 1,490,464 + -0.6 1,490,464 + -2.0 1,490,464 + -0.9 1,490,464 + -0.6 1,490,464 + +1.0 1,490,464 + +0.5 1,490,464 + -1.1 1,490,464 + -1.1 1,490,466 + +3.1 1,490,466 + -0.2 1,490,472 - +0.9 1,490,472 - +0.6 1,490,472 - -0.9 1,490,472 - +0.5 1,490,472 - +1.3 1,490,472 - +2.5 1,490,472 - -1.1 1,490,472 - -1.5 1,490,472 - -0.1 1,490,472 - -0.6 1,490,472 - -0.2 1,490,472 - -1.9 1,490,472 - -1.0 1,490,472 - -0.6 1,490,472 - -2.6 1,490,472 - -1.5 1,490,472 - -0.9 1,490,472 - +1.3 1,490,472 - +0.9 1,490,472 - +1.3 1,490,472 - +1.3 1,490,472 - -2.4 1,490,472 - -1.5 1,490,472 - -2.1 1,490,472 - -1.6 1,490,472 - +0.3 1,490,472 - -2.8 1,490,472 - +1.9 1,490,472 - -0.6 1,490,472 - +2.7 1,490,472 - +0.9 1,490,472 - -1.1 1,490,472 - -1.4 1,490,472 - -2.0 1,490,472 - -1.9 1,490,472 - -0.2 1,490,472 - -3.0 1,490,472 - -1.2 1,490,472 - -1.8 1,490,472 - -1.1 1,490,472 - -0.3 1,490,472 - -1.9 1,490,472 - -1.6 1,490,472 - +1.9 1,490,472 - -0.9 1,490,472 - -0.1 1,490,472 - +0.7 1,490,472 - -1.1 1,490,472 - +0.5 1,490,472 - -1.1 1,490,472 - -0.4 1,490,472 - -0.4 1,490,472 - -0.7 1,490,472 - +0.6 1,490,472 - +1.4 1,490,472 - -0.8 1,490,472 - -0.1 1,490,472 - -0.0 1,490,472 - +0.4 1,490,472 - -1.4 1,490,472 - -2.0 1,490,472 - -2.4 1,490,472 - +3.1 1,490,472 - -0.5 1,490,472 - -3.0 1,490,472 - +1.1 1,490,472 - -0.9 1,490,472 - +0.4 1,490,472 - +0.9 1,490,472 - -2.0 1,490,474 - +0.0 1,490,526 + +0.4 1,490,526 + -2.1 1,490,540 + -0.1 1,490,542 + -0.6 1,490,542 + -0.7 1,490,548 - -0.8 1,490,550 + +0.8 1,490,550 + +0.9 1,490,550 + +1.9 1,490,550 + -0.9 1,490,550 + -1.5 1,490,550 + -2.1 1,490,550 + +1.9 1,490,550 + +0.9 1,490,550 + -1.2 1,490,550 + +0.4 1,490,550 + -1.4 1,490,550 - -2.3 1,490,555 - -0.4 1,490,558 - +3.2 1,490,558 - -0.1 1,490,558 - -0.1 1,490,558 - +1.2 1,490,558 - -0.4 1,490,558 - -2.7 1,490,558 - -0.1 1,490,558 - -2.1 1,490,558 - -0.1 1,490,592 + +1.8 1,490,608 + +0.6 1,490,613 - -0.2 1,490,615 + -0.5 1,490,615 + -0.1 1,490,623 - -2.1 1,490,623 - -0.1 1,490,623 - -2.2 1,490,623 - -0.6 1,490,628 - -1.6 1,490,629 - -1.1 1,490,629 - +0.2 1,490,643 + -1.5 1,490,643 + -2.0 1,490,643 + +2.7 1,490,643 + -2.6 1,490,643 + +0.4 1,490,643 + +0.9 1,490,643 + +0.4 1,490,643 + -0.5 1,490,649 - PGA1_c14360 0.11 -1.2 1,490,651 - PGA1_c14360 0.11 +0.4 1,490,723 + PGA1_c14360 0.21 +1.3 1,490,723 + PGA1_c14360 0.21 -1.1 1,490,730 - PGA1_c14360 0.22 -1.1 1,490,731 - PGA1_c14360 0.22 -3.2 1,490,731 - PGA1_c14360 0.22 -0.1 1,490,731 - PGA1_c14360 0.22 -0.4 1,490,731 - PGA1_c14360 0.22 +0.1 1,490,747 + PGA1_c14360 0.24 -1.9 1,490,755 - PGA1_c14360 0.25 -0.6 1,490,805 + PGA1_c14360 0.32 -0.4 1,490,818 - PGA1_c14360 0.34 -1.8 1,490,868 + PGA1_c14360 0.41 -0.4 1,490,876 - PGA1_c14360 0.42 +0.9 1,490,893 + PGA1_c14360 0.45 -1.5 1,490,913 - PGA1_c14360 0.47 +2.5 1,490,924 + PGA1_c14360 0.49 -1.4 1,490,957 - PGA1_c14360 0.53 -0.4 1,490,967 - PGA1_c14360 0.55 -0.1 1,490,977 - PGA1_c14360 0.56 -1.6 1,490,998 - PGA1_c14360 0.59 +1.5 1,490,998 - PGA1_c14360 0.59 -0.5 1,491,011 + PGA1_c14360 0.61 +2.4 1,491,071 - PGA1_c14360 0.69 -1.9 1,491,153 - PGA1_c14360 0.81 -0.9 1,491,177 - PGA1_c14360 0.84 +0.2 1,491,190 + PGA1_c14360 0.86 +0.0 1,491,284 - +1.6 1,491,285 + -0.4 1,491,293 - +0.7 1,491,294 - +1.9 1,491,400 + +0.4 1,491,421 + +1.9 1,491,422 + -0.9 1,491,429 + +0.1 1,493,869 - -0.4 1,493,897 - PGA1_c14380 0.10 +1.0 1,493,915 - PGA1_c14380 0.11 -0.0 1,493,922 + PGA1_c14380 0.11 +1.0 1,493,942 + PGA1_c14380 0.12 +0.3 1,494,043 + PGA1_c14380 0.17 +0.4 1,494,053 + PGA1_c14380 0.18 +3.0 1,494,111 + PGA1_c14380 0.20 +0.7 1,494,191 - PGA1_c14380 0.24 +0.8 1,494,275 + PGA1_c14380 0.28 -2.0 1,494,362 - PGA1_c14380 0.32 +1.0 1,494,367 - PGA1_c14380 0.33 -1.0 1,494,524 + PGA1_c14380 0.40 -1.0 1,494,548 - PGA1_c14380 0.41 +2.4
Or see this region's nucleotide sequence