Strain Fitness in Shewanella amazonensis SB2B around Sama_3023

Experiment: Sisomicin 0.00390625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sisomicin 0.00390625 mg/ml
3,596,222	+				-0.6
3,596,222	+				+1.3
3,596,242	-				-1.9
3,596,258	-				-0.3
3,596,279	+				-0.3
3,596,280	-				-1.5
3,596,280	-				+0.7
3,596,348	-				-3.0
3,596,348	-				-0.3
3,596,348	-				-0.9
3,596,348	-				-1.1
3,596,355	+		Sama_3022	0.11	-1.0
3,596,396	-		Sama_3022	0.15	-1.1
3,596,407	+		Sama_3022	0.16	-1.9
3,596,422	-		Sama_3022	0.18	+1.9
3,596,422	-		Sama_3022	0.18	-2.5
3,596,577	-		Sama_3022	0.35	-1.7
3,596,577	-		Sama_3022	0.35	-1.5
3,596,577	-		Sama_3022	0.35	-0.9
3,596,616	-		Sama_3022	0.39	-1.8
3,596,632	-		Sama_3022	0.41	-0.9
3,596,632	-		Sama_3022	0.41	-1.1
3,596,864	-		Sama_3022	0.66	-2.0
3,596,867	-		Sama_3022	0.66	-2.6
3,596,900	-		Sama_3022	0.69	-2.6
3,596,900	-		Sama_3022	0.69	-1.6
3,596,994	-		Sama_3022	0.80	-2.1
3,597,070	-		Sama_3022	0.88	-1.8
3,597,118	-				-0.3
3,597,169	-				-1.5
3,597,169	-				-0.6
3,597,172	-				-2.2
3,597,183	-				-0.9
3,597,183	-				-1.3
3,597,183	-				-1.6
3,597,188	-				-2.6
3,597,188	-				-1.6
3,597,294	-				-0.3
3,597,356	-		Sama_3023	0.15	-1.6
3,597,387	-		Sama_3023	0.18	-0.3
3,597,401	+		Sama_3023	0.19	-1.3
3,597,434	-		Sama_3023	0.22	-0.5
3,597,434	-		Sama_3023	0.22	-2.3
3,597,558	-		Sama_3023	0.33	-1.8
3,597,558	-		Sama_3023	0.33	-1.1
3,597,734	-		Sama_3023	0.48	+1.7
3,597,734	-		Sama_3023	0.48	-0.3
3,597,744	-		Sama_3023	0.49	-1.3
3,597,896	-		Sama_3023	0.63	-1.6
3,597,896	-		Sama_3023	0.63	-1.3
3,597,920	-		Sama_3023	0.65	-0.6
3,597,920	-		Sama_3023	0.65	-1.8
3,597,920	-		Sama_3023	0.65	-0.9
3,598,093	-		Sama_3023	0.80	-0.7
3,598,121	-		Sama_3023	0.82	+0.7
3,598,141	-		Sama_3023	0.84	-1.5
3,598,165	-		Sama_3023	0.86	+0.1
3,598,221	-				-1.1
3,598,322	-				-1.8
3,598,343	-				-0.6
3,598,346	-				-1.5
3,598,349	-				+0.5
3,598,361	-				-1.6
3,598,361	-				-2.7
3,598,361	-				+0.6
3,598,462	-				-0.9
3,598,462	-				-0.7
3,598,462	-				-0.3
3,598,496	-		Sama_3024	0.11	-0.1
3,598,526	+		Sama_3024	0.13	-1.6
3,598,527	-		Sama_3024	0.13	-1.9
3,598,527	-		Sama_3024	0.13	-1.3
3,598,687	-		Sama_3024	0.26	+0.9
3,598,733	-		Sama_3024	0.29	-1.7
3,598,778	-		Sama_3024	0.33	-0.5
3,598,778	-		Sama_3024	0.33	-1.2
3,598,779	+		Sama_3024	0.33	-1.1
3,598,780	-		Sama_3024	0.33	-2.3
3,598,814	-		Sama_3024	0.35	-0.6
3,598,814	-		Sama_3024	0.35	+1.3
3,598,904	-		Sama_3024	0.42	-2.3
3,598,904	-		Sama_3024	0.42	-1.0
3,598,992	-		Sama_3024	0.49	-1.7
3,599,014	-		Sama_3024	0.51	-1.3
3,599,044	-		Sama_3024	0.53	-0.6
3,599,044	-		Sama_3024	0.53	-3.0
3,599,044	-		Sama_3024	0.53	-1.3
3,599,044	-		Sama_3024	0.53	-1.6
3,599,044	-		Sama_3024	0.53	+0.3
3,599,117	-		Sama_3024	0.59	-2.0
3,599,140	-		Sama_3024	0.60	-0.3
3,599,140	-		Sama_3024	0.60	-0.8
3,599,140	-		Sama_3024	0.60	+0.4
3,599,299	-		Sama_3024	0.72	-0.6
3,599,299	-		Sama_3024	0.72	-1.5
3,599,299	-		Sama_3024	0.72	-2.5
3,599,299	-		Sama_3024	0.72	-0.9
3,599,299	-		Sama_3024	0.72	-1.3