Strain Fitness in Shewanella amazonensis SB2B around Sama_2993

Experiment: Sisomicin 0.00390625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sisomicin 0.00390625 mg/ml
3,565,334	+	mltA	Sama_2992	0.26	-0.3
3,565,335	-	mltA	Sama_2992	0.26	-1.4
3,565,506	-	mltA	Sama_2992	0.42	-0.8
3,565,509	+	mltA	Sama_2992	0.42	-2.1
3,565,509	+	mltA	Sama_2992	0.42	-0.6
3,565,509	+	mltA	Sama_2992	0.42	+0.1
3,565,509	+	mltA	Sama_2992	0.42	-0.6
3,565,509	+	mltA	Sama_2992	0.42	+1.2
3,565,509	+	mltA	Sama_2992	0.42	-0.0
3,565,509	+	mltA	Sama_2992	0.42	+1.4
3,565,509	+	mltA	Sama_2992	0.42	-0.9
3,565,510	-	mltA	Sama_2992	0.42	+0.7
3,565,544	-	mltA	Sama_2992	0.45	-0.3
3,565,544	-	mltA	Sama_2992	0.45	-1.6
3,565,552	+	mltA	Sama_2992	0.46	-0.8
3,565,552	+	mltA	Sama_2992	0.46	-0.4
3,565,552	+	mltA	Sama_2992	0.46	-0.5
3,565,552	+	mltA	Sama_2992	0.46	-1.4
3,565,553	-	mltA	Sama_2992	0.46	-1.0
3,565,568	+	mltA	Sama_2992	0.47	-0.4
3,565,623	-	mltA	Sama_2992	0.52	-0.6
3,565,636	+	mltA	Sama_2992	0.53	-0.9
3,565,732	+	mltA	Sama_2992	0.62	-0.7
3,565,732	+	mltA	Sama_2992	0.62	+0.1
3,565,732	+	mltA	Sama_2992	0.62	-0.4
3,565,732	+	mltA	Sama_2992	0.62	-3.2
3,565,733	-	mltA	Sama_2992	0.62	-0.0
3,565,733	-	mltA	Sama_2992	0.62	-0.6
3,565,733	-	mltA	Sama_2992	0.62	-1.1
3,565,763	+	mltA	Sama_2992	0.65	-2.1
3,565,987	+	mltA	Sama_2992	0.85	-0.7
3,565,988	-	mltA	Sama_2992	0.85	-0.5
3,566,056	+				+0.1
3,566,103	-				+0.1
3,566,135	+				+1.1
3,566,135	+				-0.3
3,566,136	-				-1.3
3,566,175	+				+0.7
3,566,176	-				-0.6
3,566,267	-				+0.1
3,566,271	+				-2.0
3,566,297	+				-0.1
3,566,363	+				+0.7
3,566,364	-				-0.9
3,566,382	+				-0.6
3,566,382	+				-0.6
3,566,382	+				-0.3
3,566,383	-				+0.9
3,566,428	+		Sama_2993	0.14	-1.1
3,566,428	+		Sama_2993	0.14	-0.1
3,566,428	+		Sama_2993	0.14	-0.3
3,566,429	-		Sama_2993	0.14	+0.3
3,566,429	-		Sama_2993	0.14	-0.0
3,566,496	-		Sama_2993	0.21	-1.0
3,566,589	+		Sama_2993	0.31	-1.0
3,566,589	+		Sama_2993	0.31	-1.1
3,566,589	+		Sama_2993	0.31	-0.1
3,566,589	+		Sama_2993	0.31	-1.3
3,566,589	+		Sama_2993	0.31	-1.6
3,566,589	+		Sama_2993	0.31	-0.6
3,566,589	+		Sama_2993	0.31	+0.7
3,566,589	+		Sama_2993	0.31	-0.5
3,566,589	+		Sama_2993	0.31	-0.9
3,566,589	+		Sama_2993	0.31	-0.0
3,566,589	+		Sama_2993	0.31	-1.3
3,566,589	+		Sama_2993	0.31	-0.0
3,566,589	+		Sama_2993	0.31	-1.5
3,566,589	+		Sama_2993	0.31	-0.4
3,566,589	+		Sama_2993	0.31	+1.1
3,566,589	+		Sama_2993	0.31	+0.2
3,566,589	+		Sama_2993	0.31	+0.2
3,566,590	-		Sama_2993	0.31	+0.0
3,566,590	-		Sama_2993	0.31	-0.3
3,566,590	-		Sama_2993	0.31	-0.3
3,566,590	-		Sama_2993	0.31	+0.1
3,566,590	-		Sama_2993	0.31	-0.2
3,566,590	-		Sama_2993	0.31	-0.2
3,566,590	-		Sama_2993	0.31	+0.0
3,566,590	-		Sama_2993	0.31	+0.4
3,566,590	-		Sama_2993	0.31	+0.0
3,566,590	-		Sama_2993	0.31	+0.3
3,566,590	-		Sama_2993	0.31	-0.0
3,566,590	-		Sama_2993	0.31	+0.6
3,566,593	+		Sama_2993	0.31	+0.7
3,566,593	+		Sama_2993	0.31	+2.0
3,566,593	+		Sama_2993	0.31	-0.7
3,566,593	+		Sama_2993	0.31	-1.6
3,566,593	+		Sama_2993	0.31	-0.7
3,566,593	+		Sama_2993	0.31	+0.5
3,566,593	+		Sama_2993	0.31	-0.1
3,566,594	-		Sama_2993	0.31	-0.6
3,566,621	+		Sama_2993	0.34	-1.3
3,566,621	+		Sama_2993	0.34	-1.9
3,566,622	-		Sama_2993	0.34	-1.2
3,566,622	-		Sama_2993	0.34	-2.1
3,566,693	-		Sama_2993	0.42	+0.7
3,566,712	+		Sama_2993	0.44	-0.9
3,566,712	+		Sama_2993	0.44	-0.7
3,566,712	+		Sama_2993	0.44	-0.1
3,566,712	+		Sama_2993	0.44	+0.1
3,566,712	+		Sama_2993	0.44	-1.6
3,566,712	+		Sama_2993	0.44	-0.8
3,566,712	+		Sama_2993	0.44	-0.2
3,566,712	+		Sama_2993	0.44	-0.3
3,566,712	+		Sama_2993	0.44	+0.7
3,566,712	+		Sama_2993	0.44	-0.6
3,566,712	+		Sama_2993	0.44	-0.9
3,566,713	-		Sama_2993	0.44	+0.7
3,566,713	-		Sama_2993	0.44	-0.3
3,566,713	-		Sama_2993	0.44	-1.0
3,566,713	-		Sama_2993	0.44	-0.3
3,566,713	-		Sama_2993	0.44	+0.1
3,566,713	-		Sama_2993	0.44	+2.0
3,566,713	-		Sama_2993	0.44	-0.3
3,566,713	-		Sama_2993	0.44	+0.0
3,566,713	-		Sama_2993	0.44	-0.2
3,566,713	-		Sama_2993	0.44	+0.1
3,566,713	-		Sama_2993	0.44	-1.1
3,566,713	-		Sama_2993	0.44	-0.3
3,566,713	-		Sama_2993	0.44	-0.4
3,566,713	-		Sama_2993	0.44	+0.2
3,566,713	-		Sama_2993	0.44	-0.9
3,566,713	-		Sama_2993	0.44	+0.1
3,566,778	-		Sama_2993	0.51	-0.0
3,566,778	-		Sama_2993	0.51	-0.6
3,566,821	+		Sama_2993	0.55	+1.4
3,566,821	+		Sama_2993	0.55	-0.9
3,566,822	-		Sama_2993	0.55	-0.1
3,566,822	-		Sama_2993	0.55	-1.5
3,566,822	-		Sama_2993	0.55	-0.8
3,566,822	-		Sama_2993	0.55	-1.1
3,566,854	+		Sama_2993	0.59	+0.7
3,566,854	+		Sama_2993	0.59	+0.4
3,566,855	-		Sama_2993	0.59	-0.2
3,566,855	-		Sama_2993	0.59	-0.4
3,566,872	+		Sama_2993	0.61	-0.4
3,566,872	+		Sama_2993	0.61	-0.1
3,566,873	-		Sama_2993	0.61	-0.5
3,566,873	-		Sama_2993	0.61	-0.1
3,566,962	-		Sama_2993	0.70	-0.3
3,566,962	-		Sama_2993	0.70	-0.4
3,567,061	+		Sama_2993	0.80	-1.4
3,567,062	-		Sama_2993	0.81	+0.5
3,567,083	-		Sama_2993	0.83	-1.1
3,567,083	-		Sama_2993	0.83	-1.0
3,567,083	-		Sama_2993	0.83	+0.2
3,567,108	+		Sama_2993	0.85	-1.0
3,567,109	-		Sama_2993	0.86	-1.3
3,567,109	-		Sama_2993	0.86	-1.2
3,567,109	-		Sama_2993	0.86	+1.1
3,567,123	+		Sama_2993	0.87	-0.5
3,567,123	+		Sama_2993	0.87	+0.1
3,567,124	-		Sama_2993	0.87	-1.4
3,567,124	-		Sama_2993	0.87	+1.3
3,567,124	-		Sama_2993	0.87	+0.6
3,567,135	+		Sama_2993	0.88	-0.9
3,567,135	+		Sama_2993	0.88	+0.4
3,567,135	+		Sama_2993	0.88	-0.6
3,567,135	+		Sama_2993	0.88	-0.9
3,567,135	+		Sama_2993	0.88	-0.3
3,567,135	+		Sama_2993	0.88	+0.1
3,567,136	-		Sama_2993	0.88	-0.1
3,567,136	-		Sama_2993	0.88	+0.1
3,567,136	-		Sama_2993	0.88	+3.7
3,567,136	-		Sama_2993	0.88	+0.5
3,567,136	-		Sama_2993	0.88	+1.1
3,567,136	-		Sama_2993	0.88	-0.2
3,567,168	+				-0.6
3,567,168	+				+1.0
3,567,169	-				-0.5
3,567,169	-				+0.5
3,567,257	-				-1.0
3,567,299	+				-0.3
3,567,299	+				-1.1
3,567,316	+				+0.2
3,567,317	-				-0.5
3,567,317	-				+0.6
3,567,319	+				-0.2
3,567,319	+				+0.9
3,567,320	-				-0.6
3,567,331	+				+0.5
3,567,332	-				+0.4
3,567,332	-				+0.4
3,567,332	-				-0.1
3,567,370	+				+0.5
3,567,370	+				-1.0
3,567,381	-				+1.7
3,567,433	-		Sama_2994	0.12	+0.5
3,567,433	-		Sama_2994	0.12	+0.3
3,567,433	-		Sama_2994	0.12	+0.4
3,567,433	-		Sama_2994	0.12	+1.1
3,567,433	-		Sama_2994	0.12	+0.7
3,567,522	+		Sama_2994	0.22	+0.2
3,567,522	+		Sama_2994	0.22	+0.1
3,567,522	+		Sama_2994	0.22	+0.0
3,567,522	+		Sama_2994	0.22	-1.0
3,567,523	-		Sama_2994	0.23	-0.4
3,567,523	-		Sama_2994	0.23	+0.3
3,567,523	-		Sama_2994	0.23	-0.3
3,567,523	-		Sama_2994	0.23	+0.3
3,567,527	-		Sama_2994	0.23	-1.7
3,567,578	-		Sama_2994	0.29	-1.0
3,567,578	-		Sama_2994	0.29	-0.6
3,567,583	+		Sama_2994	0.30	+0.6
3,567,583	+		Sama_2994	0.30	-0.0
3,567,583	+		Sama_2994	0.30	+0.8
3,567,584	-		Sama_2994	0.30	+1.0
3,567,584	-		Sama_2994	0.30	+0.1
3,567,584	-		Sama_2994	0.30	-2.4
3,567,584	-		Sama_2994	0.30	+1.0
3,567,584	-		Sama_2994	0.30	-1.2
3,567,584	-		Sama_2994	0.30	-0.2
3,567,734	-		Sama_2994	0.47	+0.2
3,567,760	+		Sama_2994	0.50	+0.9
3,567,760	+		Sama_2994	0.50	+0.1
3,567,760	+		Sama_2994	0.50	+0.6
3,567,760	+		Sama_2994	0.50	-0.1
3,567,761	-		Sama_2994	0.50	-0.3
3,567,782	+		Sama_2994	0.53	-0.5
3,567,783	-		Sama_2994	0.53	-1.5
3,567,794	-		Sama_2994	0.54	-0.6
3,567,827	+		Sama_2994	0.58	+1.0
3,567,827	+		Sama_2994	0.58	+0.1
3,567,828	-		Sama_2994	0.58	-1.4
3,567,990	-		Sama_2994	0.77	+0.7
3,567,991	+		Sama_2994	0.77	+0.1
3,567,991	+		Sama_2994	0.77	+0.5
3,567,991	+		Sama_2994	0.77	+0.6
3,567,991	+		Sama_2994	0.77	-0.1
3,567,991	+		Sama_2994	0.77	-1.1
3,567,992	-		Sama_2994	0.77	-0.6
3,567,992	-		Sama_2994	0.77	-1.5
3,567,992	-		Sama_2994	0.77	+1.7
3,567,992	-		Sama_2994	0.77	+0.1
3,567,992	-		Sama_2994	0.77	-0.1
3,567,992	-		Sama_2994	0.77	-0.3
3,567,992	-		Sama_2994	0.77	-1.8
3,567,995	+		Sama_2994	0.78	+0.0
3,567,995	+		Sama_2994	0.78	-0.7
3,567,995	+		Sama_2994	0.78	+0.4
3,567,995	+		Sama_2994	0.78	-0.4
3,567,996	-		Sama_2994	0.78	+0.1
3,567,996	-		Sama_2994	0.78	-0.2
3,567,996	-		Sama_2994	0.78	-0.6
3,567,996	-		Sama_2994	0.78	-1.1
3,567,996	-		Sama_2994	0.78	+1.6
3,567,996	-		Sama_2994	0.78	-0.1
3,567,996	-		Sama_2994	0.78	-1.2
3,568,052	+		Sama_2994	0.84	-0.4
3,568,099	-				+0.2
3,568,165	-				-0.6
3,568,165	-				-1.0
3,568,215	+				-0.7
3,568,216	-				-0.5