Strain Fitness in Shewanella amazonensis SB2B around Sama_2806

Experiment: Sisomicin 0.00390625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sisomicin 0.00390625 mg/ml
3,344,685	+		Sama_2805	0.23	-0.8
3,344,685	+		Sama_2805	0.23	+0.8
3,344,685	+		Sama_2805	0.23	+0.7
3,344,686	-		Sama_2805	0.24	+0.3
3,344,841	+		Sama_2805	0.37	-1.1
3,344,841	+		Sama_2805	0.37	-0.3
3,344,841	+		Sama_2805	0.37	-0.5
3,344,841	+		Sama_2805	0.37	-0.6
3,344,841	+		Sama_2805	0.37	-0.6
3,344,842	-		Sama_2805	0.37	+0.0
3,344,842	-		Sama_2805	0.37	-0.1
3,344,842	-		Sama_2805	0.37	-0.9
3,344,842	-		Sama_2805	0.37	-0.3
3,344,842	-		Sama_2805	0.37	-0.8
3,344,842	-		Sama_2805	0.37	+0.2
3,344,955	+		Sama_2805	0.47	-0.6
3,344,955	+		Sama_2805	0.47	-1.3
3,344,981	+		Sama_2805	0.49	+0.3
3,344,981	+		Sama_2805	0.49	+0.2
3,344,981	+		Sama_2805	0.49	+0.4
3,344,982	-		Sama_2805	0.49	-0.8
3,344,982	-		Sama_2805	0.49	+0.2
3,344,982	-		Sama_2805	0.49	+1.3
3,344,982	-		Sama_2805	0.49	+0.2
3,344,982	-		Sama_2805	0.49	+0.1
3,344,982	-		Sama_2805	0.49	-0.6
3,344,982	-		Sama_2805	0.49	-1.3
3,344,982	-		Sama_2805	0.49	+0.6
3,345,044	+		Sama_2805	0.55	+1.1
3,345,045	-		Sama_2805	0.55	-0.7
3,345,045	-		Sama_2805	0.55	+0.3
3,345,060	+		Sama_2805	0.56	+0.2
3,345,078	+		Sama_2805	0.58	-0.5
3,345,079	-		Sama_2805	0.58	-0.2
3,345,079	-		Sama_2805	0.58	-0.6
3,345,127	+		Sama_2805	0.62	+1.5
3,345,129	-		Sama_2805	0.62	+0.5
3,345,309	+		Sama_2805	0.78	-0.8
3,345,309	+		Sama_2805	0.78	+0.5
3,345,309	+		Sama_2805	0.78	+0.4
3,345,309	+		Sama_2805	0.78	+0.1
3,345,310	-		Sama_2805	0.78	+0.3
3,345,310	-		Sama_2805	0.78	+0.7
3,345,313	+		Sama_2805	0.78	-0.5
3,345,313	+		Sama_2805	0.78	-0.2
3,345,313	+		Sama_2805	0.78	+0.1
3,345,314	-		Sama_2805	0.78	+0.7
3,345,314	-		Sama_2805	0.78	-1.8
3,345,360	+		Sama_2805	0.82	-2.7
3,345,364	-		Sama_2805	0.83	+0.7
3,345,376	+		Sama_2805	0.84	+0.6
3,345,383	+		Sama_2805	0.84	+0.9
3,345,383	+		Sama_2805	0.84	+0.7
3,345,384	-		Sama_2805	0.84	-0.1
3,345,405	-		Sama_2805	0.86	-0.6
3,345,416	+		Sama_2805	0.87	-2.1
3,345,416	+		Sama_2805	0.87	-0.6
3,345,416	+		Sama_2805	0.87	+0.1
3,345,452	-				-0.6
3,345,475	+				+0.2
3,345,476	-				+1.0
3,345,510	+				-0.7
3,345,510	+				-0.2
3,345,510	+				-0.3
3,345,510	+				+0.7
3,345,511	-				+0.2
3,345,511	-				-0.4
3,345,511	-				-0.3
3,345,511	-				+0.4
3,345,514	+				+0.7
3,345,514	+				-0.7
3,345,515	-				+0.5
3,345,515	-				-0.3
3,345,515	-				+1.4
3,345,515	-				+2.2
3,345,536	+				+0.4
3,345,536	+				-1.5
3,345,537	-				-0.1
3,345,537	-				-0.2
3,345,537	-				-0.8
3,345,546	+				-0.2
3,345,546	+				-0.2
3,345,553	+				-0.3
3,345,566	-				+0.5
3,345,725	+		Sama_2806	0.43	-1.3
3,345,726	-		Sama_2806	0.43	+0.7
3,345,783	-		Sama_2806	0.58	+1.7
3,345,806	+		Sama_2806	0.64	-0.6
3,345,807	-		Sama_2806	0.64	+1.7
3,345,807	-		Sama_2806	0.64	-0.0
3,345,834	-		Sama_2806	0.71	-0.3
3,345,876	-		Sama_2806	0.83	-0.9
3,345,883	+		Sama_2806	0.84	+0.4
3,345,894	+		Sama_2806	0.87	+0.7
3,345,894	+		Sama_2806	0.87	+0.8
3,345,895	-		Sama_2806	0.88	-0.3
3,345,895	-		Sama_2806	0.88	+0.4
3,345,895	-		Sama_2806	0.88	+0.4
3,345,915	+				+0.5
3,345,915	+				+0.2
3,345,915	+				+1.7
3,345,915	+				+0.7
3,345,916	-				+0.1
3,345,916	-				-0.6
3,345,928	+				+1.4
3,345,929	-				-1.1
3,345,945	+				+0.2
3,345,945	+				-0.6
3,345,945	+				-2.6
3,345,945	+				+0.5
3,345,968	-				-0.1
3,345,968	-				+0.1
3,346,072	+				-0.5
3,346,072	+				+0.9
3,346,072	+				-0.3
3,346,115	+				+0.1
3,346,115	+				-0.5
3,346,115	+				-0.6
3,346,115	+				+0.4
3,346,116	-				+0.3
3,346,132	+				-0.2
3,346,155	+				+0.2
3,346,156	-				-1.3
3,346,205	+				+3.3
3,346,206	-				-0.6
3,346,206	-				-0.1
3,346,213	+				-0.5
3,346,213	+				-0.3
3,346,213	+				-1.2
3,346,214	-				-1.1
3,346,214	-				+0.0
3,346,288	+	purT	Sama_2807	0.13	+0.4
3,346,289	-	purT	Sama_2807	0.13	-0.5
3,346,289	-	purT	Sama_2807	0.13	+0.3
3,346,313	+	purT	Sama_2807	0.15	+0.1
3,346,313	+	purT	Sama_2807	0.15	+0.4
3,346,313	+	purT	Sama_2807	0.15	-1.7
3,346,313	+	purT	Sama_2807	0.15	-1.1
3,346,314	-	purT	Sama_2807	0.15	+0.5
3,346,314	-	purT	Sama_2807	0.15	-1.0
3,346,314	-	purT	Sama_2807	0.15	-0.2
3,346,483	+	purT	Sama_2807	0.29	-0.1
3,346,483	+	purT	Sama_2807	0.29	-0.5
3,346,484	-	purT	Sama_2807	0.29	+0.4
3,346,527	+	purT	Sama_2807	0.33	-0.3
3,346,527	+	purT	Sama_2807	0.33	+0.1
3,346,527	+	purT	Sama_2807	0.33	-1.2
3,346,527	+	purT	Sama_2807	0.33	-0.1
3,346,527	+	purT	Sama_2807	0.33	-0.4
3,346,527	+	purT	Sama_2807	0.33	-1.6
3,346,527	+	purT	Sama_2807	0.33	-0.8
3,346,527	+	purT	Sama_2807	0.33	-0.6
3,346,527	+	purT	Sama_2807	0.33	+0.4
3,346,527	+	purT	Sama_2807	0.33	+0.2
3,346,527	+	purT	Sama_2807	0.33	+0.5
3,346,528	-	purT	Sama_2807	0.33	+0.5
3,346,528	-	purT	Sama_2807	0.33	+0.0
3,346,528	-	purT	Sama_2807	0.33	-0.5
3,346,528	-	purT	Sama_2807	0.33	-1.6
3,346,528	-	purT	Sama_2807	0.33	+0.9
3,346,528	-	purT	Sama_2807	0.33	-1.8
3,346,528	-	purT	Sama_2807	0.33	+0.9
3,346,604	+	purT	Sama_2807	0.39	+0.8
3,346,604	+	purT	Sama_2807	0.39	-0.4
3,346,604	+	purT	Sama_2807	0.39	-0.3
3,346,605	-	purT	Sama_2807	0.39	+0.3
3,346,655	-	purT	Sama_2807	0.44	+0.1
3,346,672	-	purT	Sama_2807	0.45	-1.0
3,346,709	+	purT	Sama_2807	0.48	+0.4
3,346,775	+	purT	Sama_2807	0.54	+1.3
3,346,775	+	purT	Sama_2807	0.54	-0.9
3,346,776	-	purT	Sama_2807	0.54	-0.4
3,346,776	-	purT	Sama_2807	0.54	-2.1
3,346,776	-	purT	Sama_2807	0.54	-2.3
3,346,776	-	purT	Sama_2807	0.54	+0.1
3,346,795	+	purT	Sama_2807	0.56	-0.3
3,346,796	-	purT	Sama_2807	0.56	-1.2
3,346,868	+	purT	Sama_2807	0.62	+0.2
3,346,869	-	purT	Sama_2807	0.62	+0.3
3,346,897	+	purT	Sama_2807	0.64	-0.5
3,346,897	+	purT	Sama_2807	0.64	+0.4
3,346,898	-	purT	Sama_2807	0.64	-0.4
3,346,898	-	purT	Sama_2807	0.64	+0.1
3,346,940	+	purT	Sama_2807	0.68	-0.9
3,346,940	+	purT	Sama_2807	0.68	-0.3
3,346,940	+	purT	Sama_2807	0.68	-1.1
3,346,941	-	purT	Sama_2807	0.68	-0.1
3,346,941	-	purT	Sama_2807	0.68	-1.6