Strain Fitness in Shewanella amazonensis SB2B around Sama_1713

Experiment: Sisomicin 0.00390625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sisomicin 0.00390625 mg/ml
2,093,685	+				-0.4
2,093,711	-				-0.1
2,093,792	-				-1.3
2,093,792	-				-0.4
2,093,795	+				+0.5
2,093,795	+				+0.8
2,093,796	-				-2.4
2,093,796	-				+0.8
2,093,796	-				+2.1
2,093,797	+				-0.6
2,093,798	-				-1.0
2,093,807	-				+1.9
2,093,807	-				-2.6
2,093,856	-				-1.1
2,093,864	-				-0.3
2,093,877	-				+1.8
2,093,906	+				+1.7
2,093,921	+				+0.3
2,093,922	-				+1.0
2,093,929	+				-1.0
2,094,026	-				+0.8
2,094,123	-		Sama_1713	0.12	+0.3
2,094,146	+		Sama_1713	0.13	+0.1
2,094,147	-		Sama_1713	0.13	+0.1
2,094,329	+		Sama_1713	0.23	-1.7
2,094,330	-		Sama_1713	0.23	+1.3
2,094,330	-		Sama_1713	0.23	+0.2
2,094,330	-		Sama_1713	0.23	+0.5
2,094,330	-		Sama_1713	0.23	+0.7
2,094,349	+		Sama_1713	0.24	-0.5
2,094,349	+		Sama_1713	0.24	+0.4
2,094,361	+		Sama_1713	0.24	+0.1
2,094,361	+		Sama_1713	0.24	-0.2
2,094,361	+		Sama_1713	0.24	+1.0
2,094,361	+		Sama_1713	0.24	+0.2
2,094,362	-		Sama_1713	0.24	+0.2
2,094,380	+		Sama_1713	0.25	+0.2
2,094,417	+		Sama_1713	0.27	+0.8
2,094,501	+		Sama_1713	0.31	+0.2
2,094,502	-		Sama_1713	0.31	+1.1
2,094,502	-		Sama_1713	0.31	-0.3
2,094,502	-		Sama_1713	0.31	-0.2
2,094,540	+		Sama_1713	0.33	+1.5
2,094,540	+		Sama_1713	0.33	+0.3
2,094,540	+		Sama_1713	0.33	-0.3
2,094,540	+		Sama_1713	0.33	-1.1
2,094,541	-		Sama_1713	0.33	-0.1
2,094,541	-		Sama_1713	0.33	+0.3
2,094,541	-		Sama_1713	0.33	+0.9
2,094,650	-		Sama_1713	0.39	+1.1
2,094,698	+		Sama_1713	0.41	+0.2
2,094,720	-		Sama_1713	0.42	+0.6
2,094,720	-		Sama_1713	0.42	+0.5
2,094,729	+		Sama_1713	0.43	-0.0
2,094,729	+		Sama_1713	0.43	-0.4
2,094,729	+		Sama_1713	0.43	-1.1
2,094,803	+		Sama_1713	0.46	+0.8
2,094,804	-		Sama_1713	0.46	-0.5
2,094,804	-		Sama_1713	0.46	+0.5
2,094,876	+		Sama_1713	0.50	-1.1
2,094,899	+		Sama_1713	0.51	-0.1
2,094,899	+		Sama_1713	0.51	+0.5
2,094,900	-		Sama_1713	0.51	-0.2
2,094,901	+		Sama_1713	0.51	+0.7
2,095,030	+		Sama_1713	0.58	+0.5
2,095,030	+		Sama_1713	0.58	+1.8
2,095,031	-		Sama_1713	0.58	-0.4
2,095,061	-		Sama_1713	0.59	+1.3
2,095,074	-		Sama_1713	0.60	-1.1
2,095,115	-		Sama_1713	0.62	-1.3
2,095,325	+		Sama_1713	0.72	+0.8
2,095,363	+		Sama_1713	0.74	+0.3
2,095,421	+		Sama_1713	0.77	-0.7
2,095,421	+		Sama_1713	0.77	+1.2
2,095,422	-		Sama_1713	0.77	+0.1
2,095,422	-		Sama_1713	0.77	+0.3
2,095,544	+		Sama_1713	0.83	-1.5
2,095,646	+		Sama_1713	0.88	+0.9
2,095,646	+		Sama_1713	0.88	-0.9
2,095,646	+		Sama_1713	0.88	+0.6
2,095,646	+		Sama_1713	0.88	-1.4
2,095,647	-		Sama_1713	0.88	-1.3
2,095,656	+		Sama_1713	0.89	-0.8
2,095,657	-		Sama_1713	0.89	-0.8
2,095,657	-		Sama_1713	0.89	+0.5
2,095,657	-		Sama_1713	0.89	-0.5
2,095,802	+				-0.5
2,095,864	+				+0.2
2,095,864	+				+0.7
2,095,914	+				-1.8
2,096,004	+				+0.5
2,096,012	+				-0.1
2,096,013	-				-0.7
2,096,013	-				+1.5
2,096,013	-				+0.3
2,096,068	+				-0.0
2,096,069	-				-0.4
2,096,077	-				+1.5
2,096,096	+				+0.8
2,096,097	-				+0.3
2,096,120	+				-0.2
2,096,323	+				-0.2
2,096,323	+				+0.9
2,096,340	+				-0.6
2,096,345	+				-0.5
2,096,430	+				+1.5
2,096,461	+				+0.1
2,096,462	-				-0.5
2,096,627	+		Sama_1714	0.22	+0.2
2,096,653	+		Sama_1714	0.32	+1.9
2,096,653	+		Sama_1714	0.32	+1.0
2,096,654	-		Sama_1714	0.32	-0.2
2,096,680	+		Sama_1714	0.41	+0.9
2,096,684	+		Sama_1714	0.43	+0.5
2,096,684	+		Sama_1714	0.43	+0.8
2,096,684	+		Sama_1714	0.43	-0.7
2,096,685	-		Sama_1714	0.43	+1.2
2,096,685	-		Sama_1714	0.43	+0.2
2,096,685	-		Sama_1714	0.43	-0.6
2,096,740	+		Sama_1714	0.63	-0.1
2,096,751	+		Sama_1714	0.67	+0.4
2,096,751	+		Sama_1714	0.67	-0.8
2,096,751	+		Sama_1714	0.67	-0.0
2,096,751	+		Sama_1714	0.67	+0.8
2,096,752	-		Sama_1714	0.68	+0.3
2,096,781	+		Sama_1714	0.78	-0.1
2,096,811	-		Sama_1714	0.89	-0.1
2,096,842	-				-1.2
2,096,842	-				-1.3