Strain Fitness in Shewanella amazonensis SB2B around Sama_1567

Experiment: Sisomicin 0.00390625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sisomicin 0.00390625 mg/ml
1,910,486	+		Sama_1566	0.53	-0.0
1,910,494	+		Sama_1566	0.53	-1.3
1,910,495	-		Sama_1566	0.53	-0.6
1,910,567	+		Sama_1566	0.57	+1.6
1,910,603	-		Sama_1566	0.59	-0.0
1,910,648	-		Sama_1566	0.62	-0.3
1,910,648	-		Sama_1566	0.62	-1.1
1,910,648	-		Sama_1566	0.62	-2.4
1,910,648	-		Sama_1566	0.62	-0.2
1,910,669	+		Sama_1566	0.63	+1.1
1,910,787	+		Sama_1566	0.69	-0.2
1,910,843	-		Sama_1566	0.73	-2.7
1,911,003	+		Sama_1566	0.82	-0.6
1,911,004	-		Sama_1566	0.82	-2.1
1,911,004	-		Sama_1566	0.82	-0.2
1,911,004	-		Sama_1566	0.82	+1.4
1,911,062	-		Sama_1566	0.85	-1.0
1,911,105	+		Sama_1566	0.87	-0.0
1,911,150	+				-0.0
1,911,155	+				-1.3
1,911,155	+				+1.6
1,911,155	+				-0.0
1,911,155	+				-0.2
1,911,155	+				-1.5
1,911,156	-				-0.1
1,911,156	-				+0.6
1,911,166	+				-0.8
1,911,167	-				-0.3
1,911,247	-				-0.9
1,911,299	-				-0.3
1,911,304	-				-0.4
1,911,361	+				+1.0
1,911,376	-				-0.4
1,911,478	-				-0.3
1,911,514	-				-0.4
1,911,517	+		Sama_1567	0.10	-0.8
1,911,517	+		Sama_1567	0.10	+0.6
1,911,518	-		Sama_1567	0.10	-0.9
1,911,518	-		Sama_1567	0.10	+0.2
1,911,523	+		Sama_1567	0.11	+0.7
1,911,523	+		Sama_1567	0.11	-1.4
1,911,523	+		Sama_1567	0.11	-0.0
1,911,524	-		Sama_1567	0.11	+0.6
1,911,576	-		Sama_1567	0.20	-0.4
1,911,576	-		Sama_1567	0.20	+0.2
1,911,583	+		Sama_1567	0.21	-0.3
1,911,584	-		Sama_1567	0.21	-1.1
1,911,584	-		Sama_1567	0.21	+0.1
1,911,652	+		Sama_1567	0.32	+0.9
1,911,652	+		Sama_1567	0.32	+0.6
1,911,652	+		Sama_1567	0.32	-1.6
1,911,653	-		Sama_1567	0.32	-0.1
1,911,660	+		Sama_1567	0.33	-1.2
1,911,684	+		Sama_1567	0.37	-0.7
1,911,807	+		Sama_1567	0.57	+0.3
1,911,807	+		Sama_1567	0.57	-0.4
1,911,808	-		Sama_1567	0.57	-0.1
1,911,818	+		Sama_1567	0.59	-0.0
1,911,827	+		Sama_1567	0.60	+0.7
1,911,827	+		Sama_1567	0.60	+0.2
1,911,828	-		Sama_1567	0.60	-0.8
1,911,838	+		Sama_1567	0.62	-0.2
1,911,838	+		Sama_1567	0.62	-0.1
1,911,838	+		Sama_1567	0.62	+0.1
1,911,838	+		Sama_1567	0.62	-0.0
1,911,838	+		Sama_1567	0.62	+0.3
1,911,839	-		Sama_1567	0.62	-0.9
1,911,843	-		Sama_1567	0.63	-1.3
1,911,870	-		Sama_1567	0.67	-0.8
1,911,972	+		Sama_1567	0.83	-0.4
1,911,973	-		Sama_1567	0.84	-1.0
1,911,973	-		Sama_1567	0.84	-0.5
1,912,002	+		Sama_1567	0.88	-0.7
1,912,002	+		Sama_1567	0.88	-0.4
1,912,002	+		Sama_1567	0.88	-0.0
1,912,002	+		Sama_1567	0.88	-0.4
1,912,002	+		Sama_1567	0.88	+0.0
1,912,002	+		Sama_1567	0.88	+1.0
1,912,002	+		Sama_1567	0.88	+0.8
1,912,002	+		Sama_1567	0.88	+0.2
1,912,002	+		Sama_1567	0.88	-0.7
1,912,002	+		Sama_1567	0.88	+0.2
1,912,002	+		Sama_1567	0.88	-0.3
1,912,003	-		Sama_1567	0.88	-0.6
1,912,003	-		Sama_1567	0.88	-0.7
1,912,003	-		Sama_1567	0.88	+0.5
1,912,030	+				+0.5
1,912,030	+				+0.1
1,912,044	+				-0.8
1,912,044	+				+0.1
1,912,044	+				-0.3
1,912,112	+				+0.6
1,912,121	+				-0.5
1,912,121	+				-2.0
1,912,121	+				+0.3
1,912,121	+				+0.8
1,912,122	-				-0.4
1,912,137	+				-0.6
1,912,137	+				-1.3
1,912,154	+				+0.9
1,912,154	+				-1.2
1,912,195	-				-1.7
1,912,225	+				-2.3
1,912,225	+				+0.5
1,912,225	+				+1.1
1,912,225	+				-1.3
1,912,226	-				-1.0
1,912,226	-				+1.0
1,912,226	-				-0.8
1,912,226	-				+1.2
1,912,226	-				-1.0
1,912,226	-				-0.0
1,912,226	-				-1.0
1,912,229	+				+2.0
1,912,231	+				-2.1
1,912,257	-				-0.9
1,912,315	-				+0.1
1,912,315	-				-0.3
1,912,341	+				-0.2
1,912,341	+				+1.2
1,912,365	+		Sama_1568	0.11	-0.1
1,912,365	+		Sama_1568	0.11	-0.8
1,912,366	-		Sama_1568	0.11	-0.3
1,912,496	+		Sama_1568	0.23	-0.0
1,912,496	+		Sama_1568	0.23	+0.1
1,912,497	-		Sama_1568	0.23	+0.2
1,912,497	-		Sama_1568	0.23	-0.4
1,912,497	-		Sama_1568	0.23	-0.3
1,912,497	-		Sama_1568	0.23	+0.8
1,912,499	+		Sama_1568	0.24	+0.6
1,912,500	-		Sama_1568	0.24	-2.0
1,912,510	-		Sama_1568	0.25	+0.3
1,912,510	-		Sama_1568	0.25	-0.4
1,912,561	+		Sama_1568	0.29	+0.4
1,912,561	+		Sama_1568	0.29	-0.3
1,912,561	+		Sama_1568	0.29	-0.9
1,912,561	+		Sama_1568	0.29	+2.6
1,912,561	+		Sama_1568	0.29	-1.0
1,912,561	+		Sama_1568	0.29	-1.0
1,912,561	+		Sama_1568	0.29	+1.9
1,912,561	+		Sama_1568	0.29	+0.0
1,912,562	-		Sama_1568	0.30	-0.3
1,912,562	-		Sama_1568	0.30	-0.6
1,912,562	-		Sama_1568	0.30	-0.0
1,912,562	-		Sama_1568	0.30	-0.0
1,912,608	-		Sama_1568	0.34	-1.4
1,912,608	-		Sama_1568	0.34	+0.0
1,912,608	-		Sama_1568	0.34	-0.1
1,912,608	-		Sama_1568	0.34	-0.9
1,912,651	-		Sama_1568	0.38	-1.6
1,912,662	+		Sama_1568	0.39	-1.3
1,912,663	-		Sama_1568	0.39	+2.0
1,912,700	+		Sama_1568	0.43	-0.6
1,912,700	+		Sama_1568	0.43	-1.6
1,912,740	-		Sama_1568	0.47	-0.1
1,912,752	+		Sama_1568	0.48	+0.1
1,912,773	-		Sama_1568	0.50	-0.8
1,912,837	-		Sama_1568	0.56	+0.6
1,912,892	+		Sama_1568	0.61	+0.5
1,912,892	+		Sama_1568	0.61	+0.2
1,912,893	-		Sama_1568	0.61	-0.8
1,912,893	-		Sama_1568	0.61	+0.7
1,912,893	-		Sama_1568	0.61	-0.4
1,912,925	+		Sama_1568	0.65	-0.8
1,912,949	+		Sama_1568	0.67	-1.3
1,913,021	+		Sama_1568	0.74	+1.4
1,913,021	+		Sama_1568	0.74	+0.5
1,913,022	-		Sama_1568	0.74	-0.6
1,913,022	-		Sama_1568	0.74	-0.0
1,913,022	-		Sama_1568	0.74	-0.6
1,913,028	-		Sama_1568	0.74	-0.7