Strain Fitness in Shewanella amazonensis SB2B around Sama_1289

Experiment: Sisomicin 0.00390625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sisomicin 0.00390625 mg/ml
1,575,683	+		Sama_1288	0.30	-1.0
1,575,684	-		Sama_1288	0.30	-0.7
1,575,684	-		Sama_1288	0.30	-0.4
1,575,684	-		Sama_1288	0.30	-0.1
1,575,688	+		Sama_1288	0.30	+0.1
1,575,688	+		Sama_1288	0.30	-0.8
1,575,688	+		Sama_1288	0.30	-0.9
1,575,688	+		Sama_1288	0.30	-1.4
1,575,688	+		Sama_1288	0.30	-1.1
1,575,689	-		Sama_1288	0.30	+2.3
1,575,689	-		Sama_1288	0.30	+0.3
1,575,689	-		Sama_1288	0.30	+1.6
1,575,689	-		Sama_1288	0.30	+0.5
1,575,760	-		Sama_1288	0.36	+0.8
1,575,863	+		Sama_1288	0.45	+0.8
1,575,888	-		Sama_1288	0.47	+1.3
1,575,943	+		Sama_1288	0.52	-0.3
1,575,952	+		Sama_1288	0.53	+0.9
1,575,953	-		Sama_1288	0.53	-0.5
1,575,953	-		Sama_1288	0.53	-0.9
1,575,991	+		Sama_1288	0.56	-0.5
1,576,019	+		Sama_1288	0.58	-0.4
1,576,019	+		Sama_1288	0.58	+0.2
1,576,020	-		Sama_1288	0.58	-0.6
1,576,020	-		Sama_1288	0.58	+0.7
1,576,020	-		Sama_1288	0.58	-0.2
1,576,074	+		Sama_1288	0.63	+1.6
1,576,074	+		Sama_1288	0.63	+0.3
1,576,075	-		Sama_1288	0.63	-0.4
1,576,087	+		Sama_1288	0.64	-1.1
1,576,088	-		Sama_1288	0.64	+0.6
1,576,147	+		Sama_1288	0.69	+0.7
1,576,147	+		Sama_1288	0.69	+0.5
1,576,148	-		Sama_1288	0.69	-0.0
1,576,213	+		Sama_1288	0.75	+0.6
1,576,213	+		Sama_1288	0.75	-0.6
1,576,214	-		Sama_1288	0.75	-0.4
1,576,214	-		Sama_1288	0.75	-0.3
1,576,230	+		Sama_1288	0.76	-1.4
1,576,230	+		Sama_1288	0.76	-1.9
1,576,279	+		Sama_1288	0.81	+0.7
1,576,303	+		Sama_1288	0.83	-0.7
1,576,303	+		Sama_1288	0.83	+0.9
1,576,304	-		Sama_1288	0.83	-0.3
1,576,304	-		Sama_1288	0.83	-0.2
1,576,379	-		Sama_1288	0.89	+0.3
1,576,573	+				+1.0
1,576,617	+				+0.4
1,576,618	-				-0.1
1,576,715	-				+0.3
1,576,715	-				-1.7
1,577,121	-		Sama_1289	0.60	+2.2
1,577,372	+				-1.0
1,577,506	-				+0.4
1,577,506	-				+1.1
1,577,524	+				+0.2
1,577,524	+				-0.2
1,577,526	+				+0.6
1,577,526	+				-0.4
1,577,527	-				+0.3
1,577,527	-				-0.3
1,577,527	-				-0.2
1,577,549	+				+0.4
1,577,550	-				+1.3
1,577,550	-				+0.7
1,577,603	+				+0.3
1,577,604	-				+4.3
1,577,607	-				+3.3
1,577,623	+				+0.6
1,577,624	-				+2.5
1,577,647	+				-0.0
1,577,647	+				-1.0
1,577,647	+				+0.6
1,577,648	-				+2.0
1,577,684	-		Sama_1290	0.12	+2.8
1,577,846	+		Sama_1290	0.35	+0.8
1,577,955	+		Sama_1290	0.50	+0.1
1,577,955	+		Sama_1290	0.50	-0.3
1,577,956	-		Sama_1290	0.50	+3.5
1,577,982	+		Sama_1290	0.54	+1.3
1,577,983	-		Sama_1290	0.54	+3.7
1,577,994	-		Sama_1290	0.55	+0.6
1,578,012	+		Sama_1290	0.58	-0.9
1,578,012	+		Sama_1290	0.58	-0.3
1,578,012	+		Sama_1290	0.58	+0.9
1,578,012	+		Sama_1290	0.58	+0.4
1,578,012	+		Sama_1290	0.58	-0.0
1,578,012	+		Sama_1290	0.58	+0.8
1,578,012	+		Sama_1290	0.58	+0.2
1,578,012	+		Sama_1290	0.58	+0.6
1,578,012	+		Sama_1290	0.58	-0.0
1,578,013	-		Sama_1290	0.58	+0.8
1,578,013	-		Sama_1290	0.58	+0.6
1,578,013	-		Sama_1290	0.58	+1.1
1,578,013	-		Sama_1290	0.58	+1.6
1,578,013	-		Sama_1290	0.58	+0.4
1,578,013	-		Sama_1290	0.58	+1.8
1,578,024	-		Sama_1290	0.59	+0.7
1,578,054	+		Sama_1290	0.63	-1.0
1,578,054	+		Sama_1290	0.63	+0.4
1,578,055	-		Sama_1290	0.64	+2.2
1,578,065	+		Sama_1290	0.65	+0.3
1,578,065	+		Sama_1290	0.65	+0.1
1,578,065	+		Sama_1290	0.65	+0.1
1,578,065	+		Sama_1290	0.65	-0.4
1,578,065	+		Sama_1290	0.65	+0.1
1,578,065	+		Sama_1290	0.65	+1.2
1,578,065	+		Sama_1290	0.65	-0.1
1,578,065	+		Sama_1290	0.65	-0.0
1,578,065	+		Sama_1290	0.65	+0.1
1,578,065	+		Sama_1290	0.65	+0.4
1,578,065	+		Sama_1290	0.65	+0.7
1,578,066	-		Sama_1290	0.65	+0.8
1,578,066	-		Sama_1290	0.65	+0.3
1,578,066	-		Sama_1290	0.65	+1.7
1,578,066	-		Sama_1290	0.65	-0.4
1,578,112	-		Sama_1290	0.72	+1.7
1,578,180	-		Sama_1290	0.81	+0.7
1,578,182	+		Sama_1290	0.81	-0.6
1,578,185	+		Sama_1290	0.82	-0.9
1,578,185	+		Sama_1290	0.82	+0.2
1,578,185	+		Sama_1290	0.82	-0.0
1,578,185	+		Sama_1290	0.82	-0.3
1,578,186	-		Sama_1290	0.82	+0.8
1,578,218	-		Sama_1290	0.86	-0.9
1,578,226	+		Sama_1290	0.87	+1.0
1,578,226	+		Sama_1290	0.87	-0.1
1,578,227	-		Sama_1290	0.87	+0.9
1,578,230	+		Sama_1290	0.88	-0.1
1,578,244	+		Sama_1290	0.90	+0.1
1,578,315	+				-0.4