Strain Fitness in Shewanella amazonensis SB2B around Sama_0986

Experiment: Sisomicin 0.00390625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sisomicin 0.00390625 mg/ml
1,192,338	+		Sama_0985	0.69	+0.8
1,192,338	+		Sama_0985	0.69	-0.2
1,192,499	+		Sama_0985	0.75	-1.6
1,192,499	+		Sama_0985	0.75	-0.1
1,192,499	+		Sama_0985	0.75	-0.0
1,192,598	-		Sama_0985	0.78	+1.1
1,192,720	-		Sama_0985	0.83	+0.0
1,192,809	+		Sama_0985	0.86	-0.9
1,192,809	+		Sama_0985	0.86	-2.3
1,192,809	+		Sama_0985	0.86	+0.4
1,192,809	+		Sama_0985	0.86	-0.7
1,192,809	+		Sama_0985	0.86	-0.2
1,192,809	+		Sama_0985	0.86	-0.1
1,192,810	-		Sama_0985	0.86	+0.4
1,192,898	-		Sama_0985	0.89	+0.6
1,193,119	-				+0.0
1,193,119	-				-0.4
1,193,119	-				+0.6
1,193,194	-				-1.9
1,193,215	+				-0.6
1,193,260	+				-1.2
1,193,260	+				+0.0
1,193,260	+				-1.8
1,193,261	-				+0.1
1,193,316	+				+0.7
1,193,316	+				-0.4
1,193,316	+				+0.6
1,193,317	-				-1.6
1,193,335	+				+0.4
1,193,359	+				-0.8
1,193,359	+				+0.6
1,193,359	+				-1.7
1,193,379	+				+0.7
1,193,379	+				-1.5
1,193,379	+				+0.9
1,193,380	-				-0.3
1,193,438	+	torD	Sama_0986	0.17	-2.1
1,193,438	+	torD	Sama_0986	0.17	-0.2
1,193,439	-	torD	Sama_0986	0.18	-1.0
1,193,439	-	torD	Sama_0986	0.18	+1.3
1,193,580	+	torD	Sama_0986	0.37	-1.0
1,193,580	+	torD	Sama_0986	0.37	+0.6
1,193,581	-	torD	Sama_0986	0.38	-1.4
1,193,581	-	torD	Sama_0986	0.38	-1.9
1,193,581	-	torD	Sama_0986	0.38	-0.4
1,193,611	-	torD	Sama_0986	0.42	-0.5
1,193,645	-	torD	Sama_0986	0.47	-0.9
1,193,649	+	torD	Sama_0986	0.47	-1.7
1,193,694	+	torD	Sama_0986	0.54	-1.4
1,193,695	-	torD	Sama_0986	0.54	-2.0
1,193,695	-	torD	Sama_0986	0.54	-0.5
1,193,802	+	torD	Sama_0986	0.69	-1.0
1,193,802	+	torD	Sama_0986	0.69	+0.3
1,193,802	+	torD	Sama_0986	0.69	-0.3
1,193,803	-	torD	Sama_0986	0.69	-1.2
1,193,803	-	torD	Sama_0986	0.69	+0.5
1,193,806	+	torD	Sama_0986	0.69	+1.1
1,193,806	+	torD	Sama_0986	0.69	-0.3
1,193,806	+	torD	Sama_0986	0.69	+0.9
1,193,806	+	torD	Sama_0986	0.69	-1.0
1,193,806	+	torD	Sama_0986	0.69	-1.0
1,193,806	+	torD	Sama_0986	0.69	-0.8
1,193,806	+	torD	Sama_0986	0.69	+0.2
1,193,806	+	torD	Sama_0986	0.69	-1.9
1,193,806	+	torD	Sama_0986	0.69	-0.8
1,193,807	-	torD	Sama_0986	0.69	-0.5
1,193,807	-	torD	Sama_0986	0.69	+0.4
1,193,807	-	torD	Sama_0986	0.69	-0.7
1,193,807	-	torD	Sama_0986	0.69	-0.4
1,193,807	-	torD	Sama_0986	0.69	-0.3
1,193,807	-	torD	Sama_0986	0.69	+0.4
1,193,807	-	torD	Sama_0986	0.69	+0.0
1,193,945	+	torD	Sama_0986	0.89	+0.8
1,193,945	+	torD	Sama_0986	0.89	+0.8
1,193,945	+	torD	Sama_0986	0.89	-0.3
1,194,107	+				+0.8
1,194,107	+				+0.2
1,194,107	+				-1.7
1,194,107	+				+1.2
1,194,107	+				+0.0
1,194,108	-				-1.4
1,194,138	+				-0.7
1,194,138	+				-0.4
1,194,138	+				-1.6
1,194,139	-				+1.2
1,194,139	-				-0.2
1,194,139	-				-1.0
1,194,237	-				-1.6
1,194,255	+				-3.1
1,194,334	+		Sama_0987	0.13	-1.0
1,194,334	+		Sama_0987	0.13	-0.3
1,194,335	-		Sama_0987	0.13	-2.0
1,194,335	-		Sama_0987	0.13	+0.6
1,194,335	-		Sama_0987	0.13	-0.7
1,194,383	+		Sama_0987	0.15	+0.0
1,194,383	+		Sama_0987	0.15	+0.0
1,194,383	+		Sama_0987	0.15	-2.6
1,194,384	-		Sama_0987	0.15	+0.2
1,194,384	-		Sama_0987	0.15	-0.5
1,194,402	+		Sama_0987	0.15	-0.7
1,194,403	-		Sama_0987	0.15	-0.4
1,194,408	+		Sama_0987	0.16	-0.9
1,194,408	+		Sama_0987	0.16	-0.8
1,194,408	+		Sama_0987	0.16	-0.9
1,194,408	+		Sama_0987	0.16	-1.4
1,194,408	+		Sama_0987	0.16	-0.5
1,194,408	+		Sama_0987	0.16	-0.0
1,194,409	-		Sama_0987	0.16	-2.2
1,194,409	-		Sama_0987	0.16	-0.3
1,194,410	+		Sama_0987	0.16	+0.6
1,194,410	+		Sama_0987	0.16	+0.1
1,194,410	+		Sama_0987	0.16	-0.6
1,194,410	+		Sama_0987	0.16	-0.2
1,194,410	+		Sama_0987	0.16	+0.4
1,194,410	+		Sama_0987	0.16	-0.3
1,194,410	+		Sama_0987	0.16	-0.4
1,194,414	+		Sama_0987	0.16	-2.1
1,194,414	+		Sama_0987	0.16	+0.3
1,194,414	+		Sama_0987	0.16	+2.6
1,194,415	-		Sama_0987	0.16	-0.9
1,194,423	-		Sama_0987	0.16	-0.9
1,194,423	-		Sama_0987	0.16	-0.9
1,194,423	-		Sama_0987	0.16	+0.7
1,194,567	-		Sama_0987	0.22	-0.0
1,194,570	+		Sama_0987	0.22	-0.5
1,194,570	+		Sama_0987	0.22	-0.5
1,194,570	+		Sama_0987	0.22	-2.6
1,194,618	+		Sama_0987	0.24	-0.3
1,194,695	+		Sama_0987	0.27	-0.0
1,194,695	+		Sama_0987	0.27	-1.5
1,194,696	-		Sama_0987	0.27	-1.9
1,194,696	-		Sama_0987	0.27	+0.8
1,194,696	-		Sama_0987	0.27	-1.2
1,194,696	-		Sama_0987	0.27	-1.4
1,194,696	-		Sama_0987	0.27	-1.0
1,194,696	-		Sama_0987	0.27	+0.2
1,194,696	-		Sama_0987	0.27	+0.4
1,194,696	-		Sama_0987	0.27	+0.6
1,194,696	-		Sama_0987	0.27	+0.6
1,194,696	-		Sama_0987	0.27	+0.2
1,194,696	-		Sama_0987	0.27	+0.1
1,194,734	+		Sama_0987	0.29	+0.1
1,194,734	+		Sama_0987	0.29	-0.1
1,194,734	+		Sama_0987	0.29	+0.4
1,194,767	+		Sama_0987	0.30	-1.4
1,194,767	+		Sama_0987	0.30	+0.2
1,194,768	-		Sama_0987	0.30	-0.2
1,194,768	-		Sama_0987	0.30	+1.9
1,194,768	-		Sama_0987	0.30	-0.2
1,194,768	-		Sama_0987	0.30	+1.0
1,194,809	+		Sama_0987	0.32	-0.3
1,194,809	+		Sama_0987	0.32	+0.6
1,194,809	+		Sama_0987	0.32	-0.6
1,194,809	+		Sama_0987	0.32	+0.2
1,194,809	+		Sama_0987	0.32	-0.4
1,194,809	+		Sama_0987	0.32	-0.8
1,194,810	-		Sama_0987	0.32	-0.2
1,194,810	-		Sama_0987	0.32	-2.1
1,194,810	-		Sama_0987	0.32	+0.1
1,194,923	+		Sama_0987	0.36	+0.1
1,194,924	-		Sama_0987	0.36	-0.9
1,194,932	+		Sama_0987	0.37	-0.1
1,194,932	+		Sama_0987	0.37	+0.1
1,194,933	-		Sama_0987	0.37	-0.3
1,194,933	-		Sama_0987	0.37	-0.4
1,194,933	-		Sama_0987	0.37	+1.4
1,194,979	+		Sama_0987	0.39	-1.2
1,194,979	+		Sama_0987	0.39	-1.9
1,194,979	+		Sama_0987	0.39	-0.6
1,194,979	+		Sama_0987	0.39	-1.0
1,194,979	+		Sama_0987	0.39	+0.8
1,194,980	-		Sama_0987	0.39	-0.7
1,194,980	-		Sama_0987	0.39	-0.4
1,194,980	-		Sama_0987	0.39	-1.2
1,195,018	+		Sama_0987	0.40	-0.2
1,195,018	+		Sama_0987	0.40	-0.4
1,195,018	+		Sama_0987	0.40	-1.5
1,195,018	+		Sama_0987	0.40	-0.3
1,195,018	+		Sama_0987	0.40	+0.4
1,195,018	+		Sama_0987	0.40	-0.9
1,195,018	+		Sama_0987	0.40	-1.2
1,195,018	+		Sama_0987	0.40	+0.2
1,195,019	-		Sama_0987	0.40	+0.2
1,195,019	-		Sama_0987	0.40	+1.3
1,195,019	-		Sama_0987	0.40	-0.3
1,195,019	-		Sama_0987	0.40	-0.1
1,195,019	-		Sama_0987	0.40	+0.2
1,195,019	-		Sama_0987	0.40	-1.3