Strain Fitness in Shewanella amazonensis SB2B

Strain Fitness in Shewanella amazonensis SB2B around Sama_0064

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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Per-strain Table

Position	Strand	LocusTag	Fraction	Sisomicin 0.00390625 mg/ml
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69,079	+			-0.3
69,089	-			+0.7
69,110	+			-0.4
69,110	+			+0.0
69,110	+			-2.2
69,110	+			-0.1
69,110	+			-1.1
69,111	-			-1.1
69,111	-			-1.2
69,111	-			-0.0
69,111	-			-0.4
69,111	-			+0.6
69,111	-			+0.2
69,143	-			-0.7
69,208	+			-1.1
69,208	+			-0.3
69,208	+			-1.0
69,208	+			-0.6
69,209	-			+0.8
69,209	-			+0.1
69,209	-			+1.0
69,209	-			+0.5
69,209	-			+0.1
69,209	-			+0.6
69,209	-			-0.1
69,209	-			+1.2
69,209	-			+0.7
69,209	-			+0.3
69,209	-			+0.2
69,209	-			+0.0
69,209	-			+1.5
69,289	+	Sama_0064	0.11	+0.5
69,310	+	Sama_0064	0.13	-0.4
69,311	-	Sama_0064	0.13	+0.8
69,311	-	Sama_0064	0.13	-0.7
69,344	+	Sama_0064	0.16	+0.3
69,345	-	Sama_0064	0.16	+1.4
69,345	+	Sama_0064	0.16	-0.2
69,369	+	Sama_0064	0.18	-0.4
69,406	+	Sama_0064	0.21	-0.3
69,407	-	Sama_0064	0.21	-0.5
69,407	-	Sama_0064	0.21	+0.3
69,437	+	Sama_0064	0.24	-0.3
69,489	+	Sama_0064	0.28	-1.9
69,489	+	Sama_0064	0.28	+0.1
69,489	+	Sama_0064	0.28	+0.3
69,489	+	Sama_0064	0.28	+0.5
69,490	-	Sama_0064	0.28	-0.6
69,490	-	Sama_0064	0.28	+0.1
69,528	+	Sama_0064	0.31	-0.5
69,556	+	Sama_0064	0.34	-0.4
69,556	+	Sama_0064	0.34	+0.4
69,556	+	Sama_0064	0.34	-0.0
69,556	+	Sama_0064	0.34	-0.9
69,719	-	Sama_0064	0.47	+1.1
69,719	-	Sama_0064	0.47	+1.6
69,846	+	Sama_0064	0.58	-0.7
69,846	+	Sama_0064	0.58	-0.2
69,847	-	Sama_0064	0.58	-0.1
69,847	-	Sama_0064	0.58	+0.3
69,847	-	Sama_0064	0.58	-1.1
69,851	-	Sama_0064	0.59	-0.6
69,851	-	Sama_0064	0.59	-0.1
69,851	-	Sama_0064	0.59	-0.4
69,851	-	Sama_0064	0.59	-0.2
69,851	-	Sama_0064	0.59	-0.3
69,880	-	Sama_0064	0.61	-0.9
69,897	-	Sama_0064	0.62	-0.7
69,924	+	Sama_0064	0.65	+0.6
69,924	+	Sama_0064	0.65	+0.3
69,924	+	Sama_0064	0.65	-1.1
69,924	+	Sama_0064	0.65	+0.4
69,924	+	Sama_0064	0.65	-0.0
69,924	+	Sama_0064	0.65	+0.3
69,924	+	Sama_0064	0.65	+1.1
69,924	+	Sama_0064	0.65	-0.4
69,924	+	Sama_0064	0.65	-0.0
69,924	+	Sama_0064	0.65	+0.1
69,924	+	Sama_0064	0.65	+0.8
69,924	+	Sama_0064	0.65	+0.9
69,924	+	Sama_0064	0.65	+0.1
69,925	-	Sama_0064	0.65	-0.3
69,925	-	Sama_0064	0.65	-0.3
69,925	-	Sama_0064	0.65	-0.3
69,925	-	Sama_0064	0.65	-0.0
69,925	-	Sama_0064	0.65	+0.5
69,925	-	Sama_0064	0.65	-0.5
69,925	-	Sama_0064	0.65	+0.2
69,925	-	Sama_0064	0.65	+0.8
69,925	-	Sama_0064	0.65	+0.5
69,925	-	Sama_0064	0.65	-1.1
69,925	-	Sama_0064	0.65	-0.1
69,925	-	Sama_0064	0.65	+0.8
69,925	-	Sama_0064	0.65	-0.9
69,925	-	Sama_0064	0.65	+0.6
70,008	+	Sama_0064	0.72	+0.4
70,053	+	Sama_0064	0.75	-0.0
70,053	+	Sama_0064	0.75	+0.4
70,053	+	Sama_0064	0.75	+0.4
70,053	+	Sama_0064	0.75	+0.2
70,053	+	Sama_0064	0.75	-0.7
70,053	+	Sama_0064	0.75	-0.2
70,053	+	Sama_0064	0.75	-0.1
70,054	-	Sama_0064	0.76	-0.3
70,054	-	Sama_0064	0.76	+1.3
70,054	-	Sama_0064	0.76	-0.6
70,070	-	Sama_0064	0.77	-0.3
70,118	+	Sama_0064	0.81	+1.1
70,119	-	Sama_0064	0.81	+2.1
70,119	-	Sama_0064	0.81	-0.6
70,119	-	Sama_0064	0.81	+0.8
70,195	+	Sama_0064	0.87	+0.5
70,196	-	Sama_0064	0.87	+1.3
70,247	+			-0.2
70,247	+			+0.0
70,248	-			-1.1
70,292	+			-0.1
70,344	-			-0.5
70,367	+			+1.7
70,404	+			-0.3
70,404	+			+0.3
70,405	-			-0.7
70,405	-			+1.0
70,405	-			+1.7
70,405	-			-0.4
70,405	-			+0.6
70,496	+			-1.1
70,496	+			+0.3
70,497	-			+0.9
70,497	-			+0.6
70,497	-			-0.9
70,497	-			-1.1
70,541	+			-0.3
70,577	+			-0.6
70,598	-			-0.1
70,656	+			-1.7
70,656	+			-0.5
70,656	+			-0.1
70,656	+			+0.1
70,656	+			+0.1
70,656	+			-2.0
70,656	+			-0.1
70,657	-			+1.2
70,657	-			+1.1
70,657	-			+0.7
70,657	-			-0.2
70,657	-			-0.1
70,657	-			-0.6
70,657	-			+0.6
70,657	-			-0.2
70,657	-			+1.0
70,657	-			+1.0
70,657	-			-1.3
70,657	-			-0.2
70,684	+			+0.4
70,684	+			+0.4
70,684	+			-0.6
70,685	-			+0.9
70,691	+			+0.3
70,691	+			-0.4
70,692	-			+0.6
70,727	+			+0.0
70,728	-			-0.1
70,728	-			+0.0
70,751	+			-0.3
70,751	+			-0.5
70,751	+			+0.4
70,751	+			+1.7
70,751	+			-1.6
70,752	-			+0.1
70,753	+			+0.4
70,753	+			-1.2
70,753	+			-1.0
70,753	+			-0.5
70,753	+			+0.1
70,753	+			-0.7
70,753	+			+1.2
70,753	+			-3.0
70,753	+			-1.2
70,753	+			-0.1
70,753	+			-1.5
70,753	+			-0.1
70,753	+			-0.0
70,753	+			+0.2
70,753	+			-0.7
70,753	+			+0.3
70,753	+			+0.1
70,753	+			-0.3
70,753	+			-1.7
70,754	-			+0.1
70,754	-			+0.5
70,754	-			-0.2
70,754	-			+0.2
70,754	-			-0.1
70,754	-			+0.5
70,754	-			+0.7
70,754	-			-1.6
70,754	-			+0.2
70,754	-			+0.6
70,754	-			-1.5
70,754	-			-0.6
70,754	-			+0.5
70,754	-			-0.7
70,754	-			-0.2
70,754	-			+1.0
70,754	-			-0.6
70,754	-			+0.6
70,754	-			-0.6
70,754	-			+0.6
70,754	-			-1.5
70,754	-			-0.1
70,754	-			-0.7
70,754	-			+0.1
70,759	+			+0.6
70,759	+			+0.2
70,759	+			+0.1
70,767	+			+0.2
70,767	+			-0.1
70,768	-			-1.1
70,768	-			+0.4
70,787	+			-0.1
70,788	-			-1.3
70,790	+			-0.1
70,790	+			-0.1
70,790	+			-0.3
70,790	+			-1.3
70,790	+			-0.1
70,791	-			+1.6
70,817	-			+0.6
70,821	+			-0.2
70,821	+			-0.1
70,821	+			+0.7
70,822	-			-0.8
70,822	-			-0.4
70,847	+			+0.1
70,847	+			-1.7
70,857	+			-0.9
70,878	+			+0.6
70,878	+			+2.1
70,924	+			-0.1
70,924	+			+1.1
70,924	+			-0.3
70,924	+			-0.3
70,924	+			-1.1
70,924	+			-0.0
70,924	+			-1.1
70,925	-			-0.2
70,925	-			+0.5
70,925	-			+1.0
70,925	-			+0.0
70,925	-			-0.3
70,925	-			+0.3
70,931	+			+0.3
70,931	+			-0.4
70,931	+			+0.1
70,931	+			-0.7
70,932	-			+0.9
70,932	-			+1.7
70,932	-			+0.7
70,932	-			-0.8
70,950	+			-0.8
70,968	-			-0.7
71,013	+	Sama_0065	0.11	-0.4
71,013	+	Sama_0065	0.11	+0.3
71,014	-	Sama_0065	0.11	-0.4
71,082	-	Sama_0065	0.19	+0.5
71,082	-	Sama_0065	0.19	-0.5
71,101	+	Sama_0065	0.21	-0.3
71,102	-	Sama_0065	0.21	-0.2
71,102	-	Sama_0065	0.21	-0.6
71,102	-	Sama_0065	0.21	+0.4
71,102	-	Sama_0065	0.21	+0.1
71,102	-	Sama_0065	0.21	-0.6
71,120	+	Sama_0065	0.23	+0.2
71,120	+	Sama_0065	0.23	-0.3
71,195	-	Sama_0065	0.31	-0.7
71,221	+	Sama_0065	0.34	-0.9
71,221	+	Sama_0065	0.34	-0.1
71,222	-	Sama_0065	0.34	+0.3
71,222	-	Sama_0065	0.34	+0.2
71,222	-	Sama_0065	0.34	-0.2
71,222	-	Sama_0065	0.34	-0.5
71,222	-	Sama_0065	0.34	+0.7
71,249	+	Sama_0065	0.37	-0.4
71,249	+	Sama_0065	0.37	-0.5
71,250	-	Sama_0065	0.37	-1.1
71,276	+	Sama_0065	0.40	+0.1
71,276	+	Sama_0065	0.40	-0.4
71,276	+	Sama_0065	0.40	+1.4
71,276	+	Sama_0065	0.40	-0.6
71,277	-	Sama_0065	0.40	-0.9
71,277	-	Sama_0065	0.40	-0.9
71,277	-	Sama_0065	0.40	+0.6
71,277	-	Sama_0065	0.40	+0.1
71,277	-	Sama_0065	0.40	+0.3
71,277	-	Sama_0065	0.40	-0.4
71,277	-	Sama_0065	0.40	-1.0
71,277	-	Sama_0065	0.40	+0.3
71,277	-	Sama_0065	0.40	+0.3
71,339	+	Sama_0065	0.47	+1.4
71,339	+	Sama_0065	0.47	-0.2
71,340	-	Sama_0065	0.47	+0.4
71,341	+	Sama_0065	0.47	-1.1
71,341	+	Sama_0065	0.47	-0.3
71,341	+	Sama_0065	0.47	+2.4
71,341	+	Sama_0065	0.47	+0.1
71,341	+	Sama_0065	0.47	-0.6
71,341	+	Sama_0065	0.47	-0.1
71,341	+	Sama_0065	0.47	-0.6
71,341	+	Sama_0065	0.47	+0.4
71,341	+	Sama_0065	0.47	+0.1
71,341	+	Sama_0065	0.47	-0.6
71,342	-	Sama_0065	0.47	-0.1
71,342	-	Sama_0065	0.47	+0.1
71,342	-	Sama_0065	0.47	-1.1
71,342	-	Sama_0065	0.47	+1.1
71,342	-	Sama_0065	0.47	-0.7
71,342	-	Sama_0065	0.47	+1.9
71,342	-	Sama_0065	0.47	-0.3
71,342	-	Sama_0065	0.47	-1.2
71,343	+	Sama_0065	0.47	+0.2
71,343	+	Sama_0065	0.47	-0.5
71,344	-	Sama_0065	0.47	-0.7
71,344	-	Sama_0065	0.47	-0.2
71,344	-	Sama_0065	0.47	+1.1
71,344	-	Sama_0065	0.47	-0.5
71,344	-	Sama_0065	0.47	-0.6
71,344	-	Sama_0065	0.47	-0.3
71,344	-	Sama_0065	0.47	+0.0

Or see this region's nucleotide sequence